Basic Information

Insect: Euproctis similis
Gene Symbol: -
Assembly: GCA_905147225.1
Location: LR990124.1:7264696-7267743[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 4.9e-06 0.00049 21.3 3.4 1 23 289 311 289 311 0.96

2 11 8.9e-05 0.0089 17.4 1.7 1 23 317 340 317 340 0.96

3 11 0.00014 0.014 16.8 0.5 1 23 352 374 352 374 0.98

4 11 0.0081 0.81 11.2 2.2 1 23 381 403 381 403 0.97

5 11 0.0011 0.11 14.0 0.7 1 23 409 431 409 431 0.98

6 11 0.00023 0.023 16.1 2.0 1 23 437 460 437 460 0.98

7 11 0.05 5 8.7 1.6 2 23 466 485 465 485 0.97

8 11 5.3e-06 0.00053 21.2 2.0 1 23 491 513 491 513 0.98

9 11 4.1e-06 0.00041 21.6 1.3 1 23 519 541 519 541 0.99

10 11 7e-05 0.007 17.7 0.3 1 23 547 570 547 570 0.97

11 11 0.02 2 10.0 1.2 1 21 576 596 576 597 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	4.9e-06	0.00049	21.3	3.4	1	23	289	311	289	311	0.96
2	11	8.9e-05	0.0089	17.4	1.7	1	23	317	340	317	340	0.96
3	11	0.00014	0.014	16.8	0.5	1	23	352	374	352	374	0.98
4	11	0.0081	0.81	11.2	2.2	1	23	381	403	381	403	0.97
5	11	0.0011	0.11	14.0	0.7	1	23	409	431	409	431	0.98
6	11	0.00023	0.023	16.1	2.0	1	23	437	460	437	460	0.98
7	11	0.05	5	8.7	1.6	2	23	466	485	465	485	0.97
8	11	5.3e-06	0.00053	21.2	2.0	1	23	491	513	491	513	0.98
9	11	4.1e-06	0.00041	21.6	1.3	1	23	519	541	519	541	0.99
10	11	7e-05	0.007	17.7	0.3	1	23	547	570	547	570	0.97
11	11	0.02	2	10.0	1.2	1	21	576	596	576	597	0.95

Sequence Information

Coding Sequence: ATGGCTAATGTAAAACGTAGAATTAAGGCGACGAAaagtacaaacaaaaataagattaaaaagcaagactttaaaattaaaacatcatTGAGATCACTCCACCATGCTGTTGATATTGatttaactaataatattgATGACACAGAGACTGGAATCGTTAAGAAACGAGCCACCAACAACATGGTATATCTAACTCCGGATGAAAAAGTGAAATTTTTACTGCAAAATGGACACAAACTCAAAAATCAGTTTGATGTTAAATCTCATAAACATGGAAGCAGTAAACCTGAAATCAGATTTGCTGCTGAATGTGAATTACCAAGTCCCATGAAGACTAAAAGTGGACGCCTTAAAAGttccaaatacaaatatttgaaaattatggATAACATATTGAAAAGTGAATTTGGTATGATCTCTGGCAGTAATCATCGTGATAGTTCacataaaatcaaatattcaaaaaatggtacaaacaataataataacaaagagATCTACAATCAAAATGATGTAATCAACATTAATGAAAAAGAAATCAATGAAGAACATAgtaaaaatcttgaaaataagaataaacattcaaaaaataaaaagtctaaatcacatgaaaataatgataaatccACTGATATTAGTGCTGTTATACCTGCAGAAGTTACATCACCAGCTACAGTTGAAACGAAAGAATTAGAAAATGTTGAGATTGTGCAGAGAACTACAAGAAGCCAATCTGAAATCAATGATGTGTCCAATATTATGACCACCCGTGGAAAAGGAAAAACCAAAAATCATTCAAAATTTAGTATATCACCTAAAACAAGAACAGTAACGGCCCCTGAACCAGCTGTAAAATTGGTCATGTTTGAATGTGATTACTGTAAAAAAGTTTTCAATAGAAAGCATTCACTTGTGAGACATATATATCTACATCTAGGAAGGAACCCACATTCCTGTCCTATATGCCCAAAGAAGTTTCGTATCCTTAAAAATATGAAGAATCACATGGATCGTGATCACTGTATTAACTCGGTTGATGATGACGCTGAAACATATTCATGCGACATATGTGACAAACCATTTTTAACTAAAGAGAGTTTAAAACTGCATCTGACAAGTCATACCAATGGTAAAAATTCATTCAAATGCATTTATTGCGACAAAAAATTTAACTATCAACTATTGCTTGTACAACATGAGAAAAAGCATCTGGTCACTGGAAAATATCAGTGTACATTGTGTGATGTGAAATATAATTCACGGGACAAATTGTATGTCCATGTGAAAGGCCATTTGAAACTAACCGACTACATATGCCAATATTGTGGGAGAGAGTTTTTGCGAGCACACTCCATGAAACGACATATTCAAACTATGCATGGTGGCCGCACAATTCAGTGTCCTATATGTAAGAAAAATTTAAAGGGACATCTATCAGAGCATCTACGTACACATGATAAAGCTCGCCCACATAAATGCCCAGACTGTGGAAAACTTTTTGCACAGTCCACTCAAATGAAAGTGCATCGTCGTTCTCATTCAGGCTCCCGCCCATACACTTGCAGGATATGTGACCGTCCATTCTCTCATTCTAATGCGTTGATCTTGCATTTGCGACgtcacactggtgaaaaaccatttccCTGTGCTGAGTGTCCGATGTCATTTTCTCAGTTGCCACATATGAAAGCACATATGTCTAAAATTCATGGTAAAGAGAAACCTTTTAAATGCACTAAATGTGATGgctatttcaaattaaaaaaagaccTGATTGTTCATAAAAAGTCTTGTGAAGGCACCGGTGTTGATAAAGATCTCTATGGAGATAACAAGAATTGTGAAGAGTCTTTACAAGATGATGATGCTGAGGTTGCACCAGTGGAATCTACGATGACATTGTCCAGAATGAGGTTCCTGTTGGCCCTTCTTCTCACCATGATTGCTAGTAAAGAGAAACTTAAATATTTAGGTTTCAATAAGCGGCTGGTTGATGATTTGCTGGTTGATTCTTTGGAGGCAATGGATCAGACTCCTTGTAAAGACGAGGATATGTCGCCATTGATACGTCTCAGGACAAATATTGAGACGTTACTGAAAGGTACAGTACCTTCGGAACAGATGGATAAATTTAGAAGAGAGAATAAATCAACTGAAGAACTTCTGGAGTTGCTCACTAGTGAGAAAGAGAAGTAA
Protein Sequence: MANVKRRIKATKSTNKNKIKKQDFKIKTSLRSLHHAVDIDLTNNIDDTETGIVKKRATNNMVYLTPDEKVKFLLQNGHKLKNQFDVKSHKHGSSKPEIRFAAECELPSPMKTKSGRLKSSKYKYLKIMDNILKSEFGMISGSNHRDSSHKIKYSKNGTNNNNNKEIYNQNDVININEKEINEEHSKNLENKNKHSKNKKSKSHENNDKSTDISAVIPAEVTSPATVETKELENVEIVQRTTRSQSEINDVSNIMTTRGKGKTKNHSKFSISPKTRTVTAPEPAVKLVMFECDYCKKVFNRKHSLVRHIYLHLGRNPHSCPICPKKFRILKNMKNHMDRDHCINSVDDDAETYSCDICDKPFLTKESLKLHLTSHTNGKNSFKCIYCDKKFNYQLLLVQHEKKHLVTGKYQCTLCDVKYNSRDKLYVHVKGHLKLTDYICQYCGREFLRAHSMKRHIQTMHGGRTIQCPICKKNLKGHLSEHLRTHDKARPHKCPDCGKLFAQSTQMKVHRRSHSGSRPYTCRICDRPFSHSNALILHLRRHTGEKPFPCAECPMSFSQLPHMKAHMSKIHGKEKPFKCTKCDGYFKLKKDLIVHKKSCEGTGVDKDLYGDNKNCEESLQDDDAEVAPVESTMTLSRMRFLLALLLTMIASKEKLKYLGFNKRLVDDLLVDSLEAMDQTPCKDEDMSPLIRLRTNIETLLKGTVPSEQMDKFRRENKSTEELLELLTSEKEK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -