Basic Information

Insect: Euproctis similis
Gene Symbol: PRDM15
Assembly: GCA_905147225.1
Location: LR990103.1:27674947-27677543[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.019 1.9 10.0 0.1 3 20 27 44 26 45 0.95

2 16 0.48 48 5.6 0.2 2 23 74 96 73 96 0.92

3 16 0.0067 0.67 11.5 0.8 3 23 120 141 118 141 0.92

4 16 7.9e-06 0.00079 20.7 3.6 1 23 145 168 145 168 0.98

5 16 0.18 18 6.9 0.1 2 21 173 192 172 193 0.94

6 16 0.29 29 6.3 0.5 1 22 200 221 200 223 0.87

7 16 0.088 8.8 7.9 1.6 2 23 266 288 265 288 0.91

8 16 0.093 9.3 7.9 0.1 2 23 313 335 312 335 0.92

9 16 0.0058 0.58 11.6 0.1 2 23 358 379 357 379 0.96

10 16 3.3e-07 3.3e-05 25.0 2.8 1 23 383 406 383 406 0.97

11 16 0.27 27 6.4 0.8 2 21 412 431 411 432 0.91

12 16 0.99 99 4.6 0.2 1 20 439 458 439 462 0.83

13 16 3.4e-05 0.0034 18.7 3.7 1 23 469 492 469 492 0.97

14 16 0.00025 0.025 15.9 0.9 1 23 496 518 496 518 0.96

15 16 0.001 0.1 14.0 0.3 1 20 524 543 524 546 0.94

16 16 0.0008 0.08 14.4 3.7 1 23 552 574 552 575 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.019	1.9	10.0	0.1	3	20	27	44	26	45	0.95
2	16	0.48	48	5.6	0.2	2	23	74	96	73	96	0.92
3	16	0.0067	0.67	11.5	0.8	3	23	120	141	118	141	0.92
4	16	7.9e-06	0.00079	20.7	3.6	1	23	145	168	145	168	0.98
5	16	0.18	18	6.9	0.1	2	21	173	192	172	193	0.94
6	16	0.29	29	6.3	0.5	1	22	200	221	200	223	0.87
7	16	0.088	8.8	7.9	1.6	2	23	266	288	265	288	0.91
8	16	0.093	9.3	7.9	0.1	2	23	313	335	312	335	0.92
9	16	0.0058	0.58	11.6	0.1	2	23	358	379	357	379	0.96
10	16	3.3e-07	3.3e-05	25.0	2.8	1	23	383	406	383	406	0.97
11	16	0.27	27	6.4	0.8	2	21	412	431	411	432	0.91
12	16	0.99	99	4.6	0.2	1	20	439	458	439	462	0.83
13	16	3.4e-05	0.0034	18.7	3.7	1	23	469	492	469	492	0.97
14	16	0.00025	0.025	15.9	0.9	1	23	496	518	496	518	0.96
15	16	0.001	0.1	14.0	0.3	1	20	524	543	524	546	0.94
16	16	0.0008	0.08	14.4	3.7	1	23	552	574	552	575	0.95

Sequence Information

Coding Sequence: ATGGCGAAAAGGAACgcgcagatagtgttacaatatTCAACGGCAACTCCGTTCAGGTGGCAGGGAAGGGTTTTATTATGCGTGTATTGCGACGAAGAATACGAGGATCCCACACATTTTAGAAGACACGTGGATTGTAATCACAGAAAAGTCATTGTATCCGTAGCATTTGCACATCTTGGCTGCAAAGACTATCTCAAGGTTGACTGCACCAACTTAAATTGTAGATTATGTACAGAACCGTTCTCGAACATCAACGACGTTGCTGAACATCTCTATAAGAAACACGACTGTGATCTGAAACTCGAATATGAAATTGGCATGCAGTGTTTTAAGTTGGAGACAGGGAAGTGGTTTTGTCTCATTTGCGATGAAAAACTGACCAATTTGACAACACTCTGTAGACATATGGCAGCATCACATTATCAGAAATTCACGTGTCATATTTGTGGTAAAACTTATAAAACCGTCGAGTCCTTGAAATATCACACGAGATCCAGTCACTCCGGCAAAATCGTGTGCAGGAAATGTTGGAAAGATTTTCCAACTATGGAAGAAAAGACAGAACACATCAGACTCTCTAAGTCATGTTGGACCTTCAGTTGTATTTATTGCGGAGATAGATTCAAATCGTGGGAGtctaaacaaaaacatttgGTTGCGAGTCACAACTGTCCAAAAGCTAATTTTCCATACGATAACGTCGTACCTCCGCTTAGCATCGCTCGTCGGAATGCCGAGACATTGATCACTCATGCTACTGCTTACCCCTTCCGACTGCCGGAAGCTGTAATTATGTGCGTGTACTGCTGTGAAGAATTTAGTGATGCCACAACATTCCGTAGACATATGACAGATAGGCACAAAAAATTCGTAGTAAAAAATGCATTTTCCCATTGCAACGAGGGTTACTTGAAAATAGATTGTACCGAATTATATTGTAGAATATGCACGGAAGCATTCGTCAAAATCGACGATGTCGCCCGCCATTTGAGCGAGAAACACAACGTTAAGTTCAATTTTGACGCACACATGGGTGTTTACCCATACAAATTTGTTCAGGACAAAATAATGTGTGGCATGTGCGATCTTAACTTCCCTTACATTAGACAACTCAGTCAACATATGGCTGTGCACTTTCAGAATTTCACCTGTGACCATTGTGGCAAATCGTACACCACCAACACAACGTTGCAGCAGCACATCAGATATGCGCACAACACTGAAGGTAAAGTGTGCAGGAGATGCAAACAGACTTTCAAGACGTTGGAGGAGAAGAGGGAGCATGTGAACAGCACTTACAACTGCTGGTTGTACACCTGCGATACTTGCAATGTGAGATTCCTGTCGTGGCGTCTAAGGGAACAGCATTTGGTTGATGTTCACGGCAAATCCAAAAAGACATACCCTTGTTCAGAATGCGACAAATGTTTTACATCTAGAGGCCTATATAGATCGCATTTTAATACGACACattcaataaaatttgtatGTTCCGTTTGTGATCGTAAGTTTGGCTCTAAGAAATATCTCGATCGGCATTCTCTAATACACACCGGTGTCAAGGCTCACCAGTGTCAGGTGTGTTTGAAGGCGTTCCCCACAAAACCGAGCTTGGTGCAGCACATGTGGGTACATAGCGAAAATAAACGGTTTGAGTGCACACCATGTAACAAACAGTTCAATCAGAGAGTTAGCTACAAGACGCACATGAAAGTGCATCATCCAAATAGCACTGAAAGTGTACAATAG
Protein Sequence: MAKRNAQIVLQYSTATPFRWQGRVLLCVYCDEEYEDPTHFRRHVDCNHRKVIVSVAFAHLGCKDYLKVDCTNLNCRLCTEPFSNINDVAEHLYKKHDCDLKLEYEIGMQCFKLETGKWFCLICDEKLTNLTTLCRHMAASHYQKFTCHICGKTYKTVESLKYHTRSSHSGKIVCRKCWKDFPTMEEKTEHIRLSKSCWTFSCIYCGDRFKSWESKQKHLVASHNCPKANFPYDNVVPPLSIARRNAETLITHATAYPFRLPEAVIMCVYCCEEFSDATTFRRHMTDRHKKFVVKNAFSHCNEGYLKIDCTELYCRICTEAFVKIDDVARHLSEKHNVKFNFDAHMGVYPYKFVQDKIMCGMCDLNFPYIRQLSQHMAVHFQNFTCDHCGKSYTTNTTLQQHIRYAHNTEGKVCRRCKQTFKTLEEKREHVNSTYNCWLYTCDTCNVRFLSWRLREQHLVDVHGKSKKTYPCSECDKCFTSRGLYRSHFNTTHSIKFVCSVCDRKFGSKKYLDRHSLIHTGVKAHQCQVCLKAFPTKPSLVQHMWVHSENKRFECTPCNKQFNQRVSYKTHMKVHHPNSTESVQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -