Esim001807.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- ZNF296
- Assembly
- GCA_905147225.1
- Location
- LR990103.1:24457095-24463565[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.19 19 6.9 0.1 3 23 103 123 101 123 0.96 2 13 0.002 0.2 13.1 2.8 1 23 306 328 306 328 0.99 3 13 0.00082 0.082 14.3 0.2 1 23 334 357 334 357 0.96 4 13 0.0027 0.27 12.7 5.2 1 23 362 384 362 385 0.95 5 13 0.00013 0.013 16.9 1.4 2 23 557 578 556 578 0.98 6 13 2.5e-05 0.0025 19.1 4.1 1 23 584 606 584 606 0.99 7 13 0.0014 0.14 13.6 2.2 1 23 725 747 725 747 0.96 8 13 5.8e-06 0.00058 21.1 0.4 1 23 753 775 753 775 0.98 9 13 0.0007 0.07 14.5 1.6 1 23 784 806 784 806 0.98 10 13 0.0035 0.35 12.3 5.9 2 23 853 874 852 874 0.96 11 13 0.0035 0.35 12.3 3.1 1 23 891 913 891 913 0.96 12 13 1.8e-06 0.00018 22.7 0.7 1 23 919 941 919 941 0.98 13 13 6e-07 6e-05 24.2 3.1 1 23 947 970 947 970 0.98
Sequence Information
- Coding Sequence
- ATGAACCAAGCAACTGCAGCAATGGATTTGGATCCACTGAACACTTATGAATATCCTTACACCAATTAccctgtaaataatatattacagtcATATCCCTACAATGTTAAGATTGAGGATACATTATTCTGTAGTCAAAACAATCAAAGTAATGAATGTACTAACAATGCAAATCAAGAATCTTCTGTGGATCAACTGGAAAAAGTTACAGAAGAAATGAAACTGTCagtaaacacaaaaaaaaaggtCAATAAAAGGGGGCTATCTTCTCAAAAAATCAACGATGCTACATTTCCATTTTATGGCTGTTCTGTATGTAATATTAGCTTTCTTACTTTAAGTGAACTCGATCAACATGTTAccatacataaaaatagaatGACAAGTTACAGATTGAGATTGAGAAACCagtttaaaaagaaacaaatgaaAAAGGAAAAGAAAAGGTTAAAGagactgcaaaaaattaaaaaagaaattgatttAGATGAGAGATTGATTGATATAAAACCGGAAGATGGTTATATTGGTAACGAGAAAGCagtagattataataatatgaactaTGGAATGCAGACAATAGACAATAATGAAATTACTAACAGAACACCAGAAGGTACAGAAACAGATGCAGAGTCATCTCAAAACAGTGAAATAGGGATAGGATCAAATGGTAATATGGAATCAACTAGTAACATAGAAAACACTGAAAATTCAGCTCatcatgaaaataataaaactagcaCTAGTTCAATTGAAAATACTGTAGCTAAAAATAAGATAGACAAAAATATTGAGGCAGctaagaaaaatgataatgcAAATTTAAATAGCAGTAGCTCAAATGGTAGCAAAACTTCTGAAAATGGCGAATCTTGTGTGAATGATGCAGATTTGGACAAAATGGAGAAAATCTATAAATGTTTTGCTTGTCAAAAGCAATTTACTTTAAGTTATTATCTCAAGTTACATGTTAGGTCTCACACAGatGAGAAACCATACATATGCAGTGCATGTGGCCAATCATTTATAACTGCAAGCAAATTGGGCAGACACAACAAGAGAATACATCTCGCCTCCCGTTTTCAGTGTAGGATATGTTTTAAGATGTTTTCTAGGTTTGATTTGCTGACCACTCATTTTGATAAACATCACTCTGAGGACAAATTAGAAGGGGAACCATATGACTACaatgccatcttgccgtacctGACCGATTTAGAGCGACAATTGATAGATCAGACAGATGATAAAGAGCACAAGGTTGATGAGTTTTCCAATGAACAAGGAGACACTGCACATCCAGAAGGAGTCAAAGAAgagGCGCAAGACGATAACATCACAGCTGTGCCAACgaaaattgaaattattgttGACGGATTGAAACTGAGTGACTATGAAACTGAAGTGAAAGTCAAAATGGAGGCGGACACTAACGATGATAATGTCGGCTCACCCGCTGCTAGAGCTCAGACACCTTGTGATGACTCtagaaatgatgatgatgttaaaaGTGAAGACTTGAACAAACCTGATTTCGATTTTGATAAGGAAGACAGCTTTTCAGATGAAGATTACTTCCCCGCAAACACTTGGGCTGCGACGCCCAAATGTGATCCATCACCACCGCCGTCTCCGAAACAGAAGAAGAATCCAGTGAAAATAGTTAAATGCGACATATGCCACAAGGAGATCAGCTCGTTGTCCTATATGCGTATACATATGCGTACACACACCGGGGAGAAACCTTTCAAATGCTTCACATGCAACAGAGCATTCATTACCAGCAGTAAACTTCACAGGCACATACTAACCCATGGGGTTTTAGGTAAACCtgatgatatgaagtatgacaATGACGTGAAGCCCGAAGGTGATGCGGTGAACAGTGACGAAGGTGGACACGACTCTGAAAGTAGCAAATCTACAGTTAAgaagtttaaaaagaaaaaaggctCTAAAACAGAAGGCAAGGTGAGAAAGAAACAGCAGAAGAGACCACACTGCTGTGAATACTGTAACCAAAGATTCCTCCACCTGCACATGCTTGAAATACACAGGAAGTGTCACAGTGGTGAAGAGTTAGTGTTGAAGTGTCAGTTTTGTCTGGAGGAGGCTGAGAATGTGACCGCTCTGAGGGAACATGAGGATACGCACAGCGGACCCAAACGTTACCTCTGCACTATATGTGGGAAGAACTATAAGAAGAGGGAGACTATGATATATCACAGGAAACGTCACCAACCGGAGAGCGAATTCATATGTGACGTTTGTTCGAAGCGCTTCAACGAAGCGGGCAAACTGGCGAAGCACATGCGCACTCACAACACCGAGAAGTTCATGTTGCGGTACGAGTGTCCCGTGTGCGCGCACATGTTCAACACTAAGTACCACGTGGAGATGCACCTGGCCACACATCAGAAGGAGGGATTGATTTTAGAATCGAATCGTAATGAAGTTTTAGCTATGGTCCTTCAGAACGCGCTCAAAATTCCGAAGCAGTCCGACCCTTCTATTACTTTGACCGAAAACCCTCCAACAAACCAAAGATACTGCATTTGCAAGATATGCGGTGAGACGTTCCACCATTTCTACTATTTAGAGGAGCACCTCAAAAGTCACGGCTCGAAAATAGCAATAGACAACACGAACCAGACTGAAGAGAAGAAATACATCTGTGAGGTTTGCAACAAGGCGTTCAAATTGCACTACTATTTGAAGCTTCACAGCTTCACACACTCCAAGGAGAAACCTTTCATCTGTCAGCAATGCGGCAAAGGTTTCATCACCAAAGGCAAGTTGAAGAGACACTTGGAAACGCATACGGGCCTGAAAAAGTACCAATGTCACATATGTTACAAATTCTTCACGAGACCAAGTTATTTAAGAATACATGTGAGGACCATACATGGAACCCAAGACTATAATTTCAGGTTTGACAAGTCTTGTATATCTCTAAGTGATATGTCTGCACTCACACAGATTTCGGACAGTCAGACTAGTATTTAA
- Protein Sequence
- MNQATAAMDLDPLNTYEYPYTNYPVNNILQSYPYNVKIEDTLFCSQNNQSNECTNNANQESSVDQLEKVTEEMKLSVNTKKKVNKRGLSSQKINDATFPFYGCSVCNISFLTLSELDQHVTIHKNRMTSYRLRLRNQFKKKQMKKEKKRLKRLQKIKKEIDLDERLIDIKPEDGYIGNEKAVDYNNMNYGMQTIDNNEITNRTPEGTETDAESSQNSEIGIGSNGNMESTSNIENTENSAHHENNKTSTSSIENTVAKNKIDKNIEAAKKNDNANLNSSSSNGSKTSENGESCVNDADLDKMEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYICSACGQSFITASKLGRHNKRIHLASRFQCRICFKMFSRFDLLTTHFDKHHSEDKLEGEPYDYNAILPYLTDLERQLIDQTDDKEHKVDEFSNEQGDTAHPEGVKEEAQDDNITAVPTKIEIIVDGLKLSDYETEVKVKMEADTNDDNVGSPAARAQTPCDDSRNDDDVKSEDLNKPDFDFDKEDSFSDEDYFPANTWAATPKCDPSPPPSPKQKKNPVKIVKCDICHKEISSLSYMRIHMRTHTGEKPFKCFTCNRAFITSSKLHRHILTHGVLGKPDDMKYDNDVKPEGDAVNSDEGGHDSESSKSTVKKFKKKKGSKTEGKVRKKQQKRPHCCEYCNQRFLHLHMLEIHRKCHSGEELVLKCQFCLEEAENVTALREHEDTHSGPKRYLCTICGKNYKKRETMIYHRKRHQPESEFICDVCSKRFNEAGKLAKHMRTHNTEKFMLRYECPVCAHMFNTKYHVEMHLATHQKEGLILESNRNEVLAMVLQNALKIPKQSDPSITLTENPPTNQRYCICKICGETFHHFYYLEEHLKSHGSKIAIDNTNQTEEKKYICEVCNKAFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRFDKSCISLSDMSALTQISDSQTSI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -