Esim001506.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990103.1:19267358-19275062[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.0011 0.11 13.9 0.6 1 23 199 222 199 222 0.96 2 27 0.0011 0.11 13.9 1.5 2 21 254 273 253 274 0.92 3 27 0.00012 0.012 17.0 0.2 2 23 309 331 308 331 0.96 4 27 0.026 2.6 9.6 6.3 1 23 378 401 378 401 0.95 5 27 0.0022 0.22 13.0 0.3 2 23 422 443 422 443 0.96 6 27 3.7e-05 0.0037 18.6 2.1 1 23 482 505 482 505 0.97 7 27 0.00025 0.025 16.0 2.2 2 23 544 566 544 566 0.96 8 27 0.011 1.1 10.8 0.7 1 23 616 639 616 639 0.96 9 27 0.0077 0.77 11.3 0.4 1 23 692 714 692 714 0.97 10 27 0.00077 0.077 14.4 5.7 1 23 725 747 725 747 0.98 11 27 0.014 1.4 10.4 1.3 2 23 759 780 758 780 0.96 12 27 0.0028 0.28 12.6 1.1 1 23 790 812 790 812 0.98 13 27 0.28 28 6.3 7.6 1 23 841 863 841 863 0.95 14 27 0.0016 0.16 13.4 3.9 1 23 874 896 874 896 0.98 15 27 2.4e-05 0.0025 19.1 0.9 1 23 904 926 904 926 0.98 16 27 0.00053 0.053 14.9 0.4 2 23 946 968 945 968 0.97 17 27 0.3 30 6.3 3.6 1 23 1015 1037 1015 1037 0.96 18 27 0.0077 0.77 11.3 0.7 2 23 1048 1070 1047 1070 0.94 19 27 0.011 1.1 10.8 0.2 2 23 1093 1114 1092 1114 0.95 20 27 0.00034 0.034 15.5 0.3 2 23 1195 1216 1194 1216 0.95 21 27 3.2 3.2e+02 3.0 3.8 5 23 1226 1244 1223 1244 0.94 22 27 0.0029 0.29 12.6 1.1 1 23 1254 1277 1254 1277 0.96 23 27 0.23 23 6.6 4.9 2 23 1294 1312 1294 1312 0.95 24 27 0.87 87 4.8 2.7 2 22 1316 1336 1316 1336 0.94 25 27 0.56 56 5.4 0.7 2 23 1385 1406 1384 1406 0.93 26 27 0.00045 0.045 15.1 0.4 2 23 1417 1439 1416 1439 0.96 27 27 5.5 5.5e+02 2.3 4.4 2 20 1477 1495 1476 1497 0.93
Sequence Information
- Coding Sequence
- ATGGCCCTCAAACTTGGAAAATGCAGGCTTTGCCTTAAACTTGGCGATTTCTATTCCATCTTTACGGTGGATGACTCCATACAGTTGTCAGAGATGACAAGGGAATGCACCGGCCTAAAGATTTACGAAGGAGATGGCCTGCCAGATAAAGTGTGTTCTGAATGTATACAAAAGCTTAGCAGTGCTTACATATTTAAACAGCAATGCGTACGTGCGGACCAGGAGCTACGAAGGAACTATGTACCACCTCCTGGCTTTGTCAGTTCCCCACCTCCTAATAGACAAAGCAGTGATTCTGCATTCTCAAATTTTACAAACAGTTCCAACTTTACAAAACCAACGTCTTCAACAGAAGACATATCTCCGACAAACAGGAATCGTAAACGAAGCTTAGAAAGTGACGGCAACACTTCAATAGAAGGAGGTTCTAATGAcgtaaaaccaaaaagtgcaaAACGCGTGGAAGAACTTCGAAATTCTCAGAAGAGGCGACGTTTACCATCCGAAAATGCTTCTCAACCAGACTCTGATTATGAAGACAACACTGGATCTTATGTACCAGAAACTGATTCAGATGAACCTCTTTTGAAAAATTTCAAATGCAAACTTTGCCCCAAAGAGTTCAGTGCCTACAAAAATCTTGCCATTCATAACAATAGAATTCATGGCGAAAGCCAGCAAAGGAAACCACCAGTGGAGGGTGCCGGTTTTGAAACACGGAAGTACAACGGCGATGCTGCAGACGTAGAAGATAAGTTGGAGTGTGATAAATGCAACAAGAGTTTCAAACTCAAGATTATGCTGAAGCGTCACCATGAAACGTGTGGGAAGACGCCATCCAAGATACTAGCGAAAGAGTTGCACGTATCTTTGGAGCCAATAGATTCAAATTATAAAGTACAAATACAGAGTGATAACACCATAACTTGTGAATATTGTTCGGGTGTATACAAAACTCGCGAGAACCTGGCAAAACATATGAAGATTGTTCACGCGGCTGTTTTGAAGAAATCGGATGAAccgaaaaaaaaagtatcagtGCCATGTCTGTATTGTCAGCAGTTATTTGATGATTACTACTTACATAACGCACATTTCGAAATTTGTCCAAAGATAGATAAGTCCAAACCTTTCGATTGCCTCGTATGTGGAAAAAAAACAACCAGAAAGCACTCTTATTGTCAGCATCTAAAGAACATGCACTTTAATCTTCGTTTTACGGCCGTAGAGGCTGTGGAGACGGTAGAATCACAGGATTCAGAAGAATGCGGGGTTTGTTCAATGAAATTTAAGTCGAAAGAAACCCTTGCCCAGCATTTGATGGCTCATGTATCTAAAATCCAAGAAGGTGGCGCAGATAATGATTCgagATCAAGTGTTGCAGATGATGCTTCTGTTCGATCAGTCCACAGTAACAGTAATAGTTTCACTGGTAGAGGTAACTTCAAGTGTGACTTGTGCGGCAAGGATTTCAAATATCAAAAAGCTCTCATGACGCACAGACAGAAAAGTCATACAGAGGTACCTCGCCAGATTAAAATCGAGCCAGACGTGGAAGCATCTACAAGTTTATTGAGTGAGGCAAAATATCGCTCAGAATCAGAATCTAGTCAAGAAGAGGATGATAACACGTGTGACATATGTGAAAAAAGATTCTCATATAAGCGTTCCTTAATACAGCATAAGAAAATGAGACATAATATGAGTTCTGGACACAAACGAGCCAGAATTGCCCTAAAGGACTGTATGGTGCGCTGCCGCATCTGTGACATTGAAATGAAGGTGAGCGAGATCAATCAACACAATGAAACCCATGCATCGAAAGGGTTGAAACCCAGAAACTTGTATTCCTGTGGCGAATGTGAATCAACGTTCAACGCGTGCAGTGCACTATCGAAACATATAAAATTAGTTCATAGGTTGAAGCAGAAAGCGGAGGACACTGTAATTCCATCGGATTTTTGTGAAGTCGTTGTGACGAAATCGGAACCGCTGGACTGGAGCCAGAATCACAACGACATTGATATGGTTCCGAAGGATGCTGAAGTTAAACCTATTGTCGATCTGAACGGTTTCACATGCACCATTTGTAATAAGAAGATGCCAACACTGATATCGCTCAGGAGACACGCCAATTGGCACACCAACGTTGGGAAAAAAATTGAGAAGATACACGAGTGTTTTGTCTGTAATGAGCAATTCAGATTTCAAAGTCACTATAAACTGCACATGCGCGTACACTATCAAGACACAAACCTCGACCCCACACACCTCACCTGCAACATCTGCGGCCGCAAGAGCAAGCACCTCCGCGCTGCCCAGGCCCATATGAACTTCCACAAGCAGATGCGCTTCCAGACAAAGGATTACCAATGCTCTATCTGCAACAGAGTCTTCCAGTTCAGAAAAGTCTATCTCTCTCATATGCTTATACATTACAAAAAGGGTGAGAGCGTACAAAATACGATTGTCGGTGATATTGGACCCGCCAATGTTGACAAGACAATTTTTGATGGCAAATATACTTGTAAGCACTGTGGAAAAGTATGTGACTCGGAAAATTCCTTAAAATGCCACCTTTCTTATCACAATTCAAAAACATTCTTGTACGGCGCACGACACGAGTGTCAggtatgtaaaattaaattcacAAATAAGAGACGCCTAGAACTCCATACCAGAACTCATTATGAAGATGACAATGGTCCATACAAATGTAAGTTATGCGGTAAGGGGTACACAGACGAGATGTATCTCAAGAGACATGTCAAAGGTCACAACTTCAAAACTGAGGATCATAAAAAGAGGATAGCAAAGCTTCGAAAGGACAAAGTGAAGTGTCCCATATGTTCGCGATACTACAACGATCTAGTAAAACTGATCCGTCATCTGCGGCGAACTCACCCCGAGAGTAAAATGATCAAGACAGATCCGGACGCACCCCCACAACCCTACTTCTCTTGTAAACTTTGCGCCAAAGTATTTCTCGAGGAGCGTCGCCTTCACTCGCACGAGCAGCAACACTTGAGGAAGCCGGAATTCTTTAAGTGCAAGTTTTGTGGAAAGAAGACCATATCGCTGAAGAGTCATAGAGTTCACATCAAAGGTCACCTCACGCAAAAATATGTTGACAATCCGCTGAAATGTCAGTTGTGTGATGAGACGTTCGAGCGAGGGTACGACCTTCACTACCACGTGCGAGACATCCATAATATCGAGGAGAGCTGGATCGCGGAACGAACCGAGCAGAGCCTGGTCGGGCCTCTACAGGACCTGCAATGTAACATATGTATGAAGGTGCTGGCCAGTAAAGGAAACTTTGAACGCCATCTTGACTATCACAACTCGTTGCGATGCAACTATTGCTTTGATTACTTTAGCTCTCTCAGGTTCTTAGAGGGGCATTTAGCTTTCTCGTGTGAAAAGCAAAAACTAGTAGGTGATACAGAGACCTAcgctaaaaaaattaaatgtcatgTTTGCTACAAACCTTTCCATGTGCAAGTAAAGCTGGACTGTCACCTGCACACACAGCACAATATTAAAGTCAACAAGGAGGCTTCATCAAGCGAAAAAGATATTGTGTGTGATTACTGTTTTAAAGTATTTGAGAATAATTACGCTTTGACTACACACAAGATTTACCATCGCACGGTTGGTTATTATGggtgtatttattgtaaaaagaaGTTTGGTACAATCACTCTCTTTAGGAAACACAAGAATCATCATTTTGCGCAACTCAATGCTGAGGAGCCATTCAAGTGTGAACATTGTGATGAGACTTTTGTTGCCTTTAGAGATATGATATACCACATGAGAGATGTTCACAAGGATGATAAAGATTGGATTACCTTGCCCAAGGAATCCATTGAGGAGACATGTAAAATATGCAATAAATCCTTCTTTAACCTACACAGGCACATGTCATATCATGAAGAAAATAGGTGTAAAAAGTGTGGTGAGTATTTCTTTTCTACAACTGAGTTTGATAACCATCTGTGTACTATAGAGAGTGATGAAGAAGTGAACAGTAGTCTTAGTACATATAAAGAAGCCAAATATGAGGAGTGTACTTTCTGCTTCAAACATATCACTAGACAGAGCTCTAAGGCGAAGCATGACCACATACATAAGGGATCTGGGTCCATATCATGCCGATTCTGTACACTCAAGTTTAAAACAATAGATGCCTTCAACATTCATGCCTTCTCGCATAGGAACAGAAAGTATAATAAGAAACCAATCAAATGCAAGAAATGTGGAGAGAAGTTTGTTAAGTATGGACCTTTTATAAAGCAcatgaaaataatacataaatcctGCAAGAAGATGCATTATAGGGCAGTTGTGTTGCCTGAGCCTTGTGTTGTGTGCGGTGATGAGTTTCCTAATCTGCACAACCACTACCGCGCACACTTGCTGAACCAGTGTCAGtcctgttttaaatattttacttcatCCAAACTGTTCAATTACCACAAGTGTGATAAAGAAGATTCTGATCCTTCGAAAGTGTTTATAAGTGATGAAAATTTGAAAGATCTCATAAACTCATATGTCGCCAAGGATATGAAAGATGACGAAAAGTATTATGGTCAGACCGAAGATGAAGAAGACGACGAAATGAATTCCCAAGTAGGGGAAGAAGATTTAGAAAGTCAAGAAGAGGAGGTGAAAGATATCAAAGATGTTTTCATTGAAGATGAGGACATAACTGCACACCCACTCTCTATTCAGTCGCCAATAATATCTGATGTGTTGTCATTGTACCAAAATGAAAAGATGGGTGGTAATGTTGAAAATAATGACGATATGGATAATGATATTGTTGCCTTGTCAGATGATGACTCTCTTTCAGAGACTATAGTACAAAACAGTGAACCAATTGTTATAGATGACGATTGA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDDSIQLSEMTRECTGLKIYEGDGLPDKVCSECIQKLSSAYIFKQQCVRADQELRRNYVPPPGFVSSPPPNRQSSDSAFSNFTNSSNFTKPTSSTEDISPTNRNRKRSLESDGNTSIEGGSNDVKPKSAKRVEELRNSQKRRRLPSENASQPDSDYEDNTGSYVPETDSDEPLLKNFKCKLCPKEFSAYKNLAIHNNRIHGESQQRKPPVEGAGFETRKYNGDAADVEDKLECDKCNKSFKLKIMLKRHHETCGKTPSKILAKELHVSLEPIDSNYKVQIQSDNTITCEYCSGVYKTRENLAKHMKIVHAAVLKKSDEPKKKVSVPCLYCQQLFDDYYLHNAHFEICPKIDKSKPFDCLVCGKKTTRKHSYCQHLKNMHFNLRFTAVEAVETVESQDSEECGVCSMKFKSKETLAQHLMAHVSKIQEGGADNDSRSSVADDASVRSVHSNSNSFTGRGNFKCDLCGKDFKYQKALMTHRQKSHTEVPRQIKIEPDVEASTSLLSEAKYRSESESSQEEDDNTCDICEKRFSYKRSLIQHKKMRHNMSSGHKRARIALKDCMVRCRICDIEMKVSEINQHNETHASKGLKPRNLYSCGECESTFNACSALSKHIKLVHRLKQKAEDTVIPSDFCEVVVTKSEPLDWSQNHNDIDMVPKDAEVKPIVDLNGFTCTICNKKMPTLISLRRHANWHTNVGKKIEKIHECFVCNEQFRFQSHYKLHMRVHYQDTNLDPTHLTCNICGRKSKHLRAAQAHMNFHKQMRFQTKDYQCSICNRVFQFRKVYLSHMLIHYKKGESVQNTIVGDIGPANVDKTIFDGKYTCKHCGKVCDSENSLKCHLSYHNSKTFLYGARHECQVCKIKFTNKRRLELHTRTHYEDDNGPYKCKLCGKGYTDEMYLKRHVKGHNFKTEDHKKRIAKLRKDKVKCPICSRYYNDLVKLIRHLRRTHPESKMIKTDPDAPPQPYFSCKLCAKVFLEERRLHSHEQQHLRKPEFFKCKFCGKKTISLKSHRVHIKGHLTQKYVDNPLKCQLCDETFERGYDLHYHVRDIHNIEESWIAERTEQSLVGPLQDLQCNICMKVLASKGNFERHLDYHNSLRCNYCFDYFSSLRFLEGHLAFSCEKQKLVGDTETYAKKIKCHVCYKPFHVQVKLDCHLHTQHNIKVNKEASSSEKDIVCDYCFKVFENNYALTTHKIYHRTVGYYGCIYCKKKFGTITLFRKHKNHHFAQLNAEEPFKCEHCDETFVAFRDMIYHMRDVHKDDKDWITLPKESIEETCKICNKSFFNLHRHMSYHEENRCKKCGEYFFSTTEFDNHLCTIESDEEVNSSLSTYKEAKYEECTFCFKHITRQSSKAKHDHIHKGSGSISCRFCTLKFKTIDAFNIHAFSHRNRKYNKKPIKCKKCGEKFVKYGPFIKHMKIIHKSCKKMHYRAVVLPEPCVVCGDEFPNLHNHYRAHLLNQCQSCFKYFTSSKLFNYHKCDKEDSDPSKVFISDENLKDLINSYVAKDMKDDEKYYGQTEDEEDDEMNSQVGEEDLESQEEEVKDIKDVFIEDEDITAHPLSIQSPIISDVLSLYQNEKMGGNVENNDDMDNDIVALSDDDSLSETIVQNSEPIVIDDD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -