Basic Information

Insect: Euproctis similis
Gene Symbol: ham
Assembly: GCA_905147225.1
Location: LR990122.1:10548973-10573584[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.84 84 4.8 0.0 2 23 155 177 155 177 0.93

2 9 0.014 1.4 10.5 3.8 1 23 184 207 184 207 0.92

3 9 1.8e-08 1.8e-06 29.0 0.1 1 23 213 236 213 236 0.96

4 9 1.5e-06 0.00015 22.9 1.7 1 23 242 264 242 264 0.95

5 9 7.4e-05 0.0075 17.6 5.7 1 23 270 292 270 292 0.99

6 9 0.00053 0.053 14.9 2.7 2 21 300 319 299 320 0.93

7 9 1.3e-08 1.3e-06 29.4 0.7 1 23 711 733 711 733 0.98

8 9 4.7e-07 4.7e-05 24.5 1.7 1 23 739 762 739 762 0.97

9 9 1.8e-05 0.0018 19.6 3.2 1 23 768 790 768 790 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.84	84	4.8	0.0	2	23	155	177	155	177	0.93
2	9	0.014	1.4	10.5	3.8	1	23	184	207	184	207	0.92
3	9	1.8e-08	1.8e-06	29.0	0.1	1	23	213	236	213	236	0.96
4	9	1.5e-06	0.00015	22.9	1.7	1	23	242	264	242	264	0.95
5	9	7.4e-05	0.0075	17.6	5.7	1	23	270	292	270	292	0.99
6	9	0.00053	0.053	14.9	2.7	2	21	300	319	299	320	0.93
7	9	1.3e-08	1.3e-06	29.4	0.7	1	23	711	733	711	733	0.98
8	9	4.7e-07	4.7e-05	24.5	1.7	1	23	739	762	739	762	0.97
9	9	1.8e-05	0.0018	19.6	3.2	1	23	768	790	768	790	0.98

Sequence Information

Coding Sequence: ATGACAAATGGACAAGCTGTGACATCGGTGTACATCTCGACGGAGACTAATGGCGCCATCTATTGCGGTTACGCGATGTCCAGGGAGCTGTCAGTTATAAGCGTTGACCGCGAGAGGGCGAAAATAATGATGGTGTTcaattcattaatttttttaccATTGGTGGTTGGCAAGAACGGCGTCCGCGCTTGGCTAGATGGCACCACTGAGAAGAGCAATTGGCTGAAGCTGATGCGGTTCACAAACTACCCACACGACGTGAACGTACAGCATCTCCTATCCGGAGGCCAAATATGTTACAAGGTGATTCGCGATATCTCTTCTGGCCAAGAGCTCTTGCTGGGTCCCAGGACACCACTGGCGCTTCAGGATATCATACCTTCTCCGGAGCGTCAGCCTTCCACTGAGAAGTTCAAGTCTGTCTCTCAAAGCGAGGAAGACGAACGTGAGGACGCCGAGCCCAGGTGTAACTTCTGTGACGCACCATATCCCAACATCGATGTTCTTGATCGCCACTTGATCCAGGAGCACGCGCAGCCAGCAGCTGCCCATCATTGCGAACTTTGCAACCGAGCTTACAGCACCCATACACTATTGCTGAGACACCGTGCGCTTGCTCATACAGACATTAGGAAATACCCTTGCGAAAATTGTCCTAAGGTATTTACCGATCCTTCCAACCTCCAGCGCCACATCCGGGCGCAGCACGTCGGAGCTCGCAGCCACGCCTGCCCTGAATGCGGCAAGACCTTCGCTACCTCCTCGGGCCTGAAGCAGCACACGCACATCCACTCCAGCATCAAGCCGTTCCAGTGCCAAGTCTGCTTTAAAGCGTACACCCAGTTCTCAAATCTTTGTCGTCATAAGCGAATGCACAGCGCCTGCAGAGCAGTTTGTGAGTGCGGCAAATGTGGTCAATCTTTTGCAACCCATGCATCTCTAACTAAACATAAGAGATTCTGTGACACCGCATCTGCAGCTTCAGTAAACCTTCGAGGGCAGATGACACAAATACCACCACTGAGAAACCTCGGCATGAACACTTCAAACAATAGCAACCCATTCCCGATGTACAGGGGACCAAGTCTGCCGATTCCTTACAATACATTTGCGAGTTATCCAGCTTTCTTCTCGGCAGCTGCAGCAGCATGCCCGCCCGAATTTTTAAATCCTTTGCTTTTTAATGTGCAAGGAGCCAGGCTTGCAATGGAACACGATCTAGCTATGTCTAGTGCTAGTTTGCTGTCAAAACAGCAAGAAGGCCGTTTATCGGTAAAAAGCATGGATAGTGCCAATTCCTTGGAAGAAATCAGAAAGCCCAAGGATATAGACTACGAAATCAAGAGAGACAGCTATAACAAAGATCGAGCTACGCCCAAATCACAAAATCTTTACAACAAACATTCTTCTCCATCTGGAGAGGAATCTTCCCAACATCAGTCACCTCCGATAATGCCTCTTACTACCACCCCCATTGTTCCATATAGTTTTTCCAGGGAGGAAACAAAACGAAGGTCACCTTTCAATTTCTCCCTAAAGCTTAACAACAATGAAATTACAGCAAATAAATCTGAATCACCACAACCAAAAGATTTATCTAAAAACGTTGTAGAAGTTGATAAAACTTCGGAGTATTCAGATGTTGAAGACAAGACAAAGAAGGACGAGGGTGATCAACCCTTAGATCTATCTGTGAGCAGGAAAACGAATGAAAAAGATTCCGAAATTGAGAATGATGACCGTTCGTTTCGGAATTCGGTTAAGTCTTATTCTCCGCCCGACAGCCCGATTGAGCGCAATAAGACTCCAGAAAACGATACCACTGACGTAGATGTGGAGGCTGTAGAACCCAAAAGAGAAGAATCGCCACCTCAGCTTGTCAACCCGCCAATCGCTTTCCCGATGCCTGTTCATCCACAGCATCGCAATATCATCGATGCCATGTACAGACCTAGGTTTCCGTCCTTCCATCCGTCAGAATCAATTTTAAACTCCACTCACTCGCCTTATGTACCGAGTCCGTTCAATTTTTTATCCCCACTTCTAGGCACTGACGGCCCCGAGAGGCAACCTAGCGCGTACGCAAAATTTCAAGAGCTAAACTCTGGCTCGGGGAAACTGCGCGATAGATACGCTTGCAAATTTTGTGGAAAGGTGTTCCCGAGGAGTGCGAATTTGACTCGCCACTTGCGCACCCACACAGGAGAGCAGCCTTACAAATGCAAGTACTGCGAGCGTTCATTCTCAATTTCCTCAAACTTACAACGACACGTGAGGAATATCCATAATAAGGAGAGACCGTTTCGGTGTCCGCTATGCGAGAGATGTTTTGGACAACAGACCAATCTGGACCGTCATCTGAAGAAGCACGACGCTGAAGGAGGTGATTCTCCAAGTTCAGCGGATACAGAGCGCGAGGATGCGTATTTCGATGACATCAGATCGTTTATGGGTAAAGTGACTTGTTCCCCTGGAGTGAGGACGTCCCCGGCGACATCTCCACACGCCCCCCACGCCGCACCGCGCCCCTCTCTCGCCATCTCCACATAG
Protein Sequence: MTNGQAVTSVYISTETNGAIYCGYAMSRELSVISVDRERAKIMMVFNSLIFLPLVVGKNGVRAWLDGTTEKSNWLKLMRFTNYPHDVNVQHLLSGGQICYKVIRDISSGQELLLGPRTPLALQDIIPSPERQPSTEKFKSVSQSEEDEREDAEPRCNFCDAPYPNIDVLDRHLIQEHAQPAAAHHCELCNRAYSTHTLLLRHRALAHTDIRKYPCENCPKVFTDPSNLQRHIRAQHVGARSHACPECGKTFATSSGLKQHTHIHSSIKPFQCQVCFKAYTQFSNLCRHKRMHSACRAVCECGKCGQSFATHASLTKHKRFCDTASAASVNLRGQMTQIPPLRNLGMNTSNNSNPFPMYRGPSLPIPYNTFASYPAFFSAAAAACPPEFLNPLLFNVQGARLAMEHDLAMSSASLLSKQQEGRLSVKSMDSANSLEEIRKPKDIDYEIKRDSYNKDRATPKSQNLYNKHSSPSGEESSQHQSPPIMPLTTTPIVPYSFSREETKRRSPFNFSLKLNNNEITANKSESPQPKDLSKNVVEVDKTSEYSDVEDKTKKDEGDQPLDLSVSRKTNEKDSEIENDDRSFRNSVKSYSPPDSPIERNKTPENDTTDVDVEAVEPKREESPPQLVNPPIAFPMPVHPQHRNIIDAMYRPRFPSFHPSESILNSTHSPYVPSPFNFLSPLLGTDGPERQPSAYAKFQELNSGSGKLRDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFRCPLCERCFGQQTNLDRHLKKHDAEGGDSPSSADTEREDAYFDDIRSFMGKVTCSPGVRTSPATSPHAPHAAPRPSLAIST*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00441779;
90% Identity: iTF_00709532;
80% Identity: -