Esim002242.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990103.1:27284389-27287196[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0043 0.43 12.0 0.8 1 23 66 89 66 89 0.97 2 19 0.00097 0.097 14.1 0.1 2 23 116 138 115 138 0.95 3 19 0.0002 0.02 16.3 1.5 1 23 160 182 160 182 0.98 4 19 0.00022 0.022 16.1 0.2 1 23 186 208 186 208 0.92 5 19 0.0026 0.26 12.7 1.2 1 23 230 253 230 253 0.92 6 19 0.18 18 7.0 2.1 1 23 333 356 333 356 0.96 7 19 0.00097 0.097 14.1 0.1 2 23 383 405 382 405 0.95 8 19 0.0067 0.67 11.5 1.4 1 23 427 449 427 449 0.98 9 19 0.004 0.4 12.2 0.0 1 19 453 471 453 473 0.95 10 19 0.016 1.6 10.2 0.8 2 23 512 534 511 534 0.92 11 19 0.0043 0.43 12.0 0.8 1 23 615 638 615 638 0.97 12 19 0.00067 0.067 14.6 0.1 2 23 665 687 664 687 0.95 13 19 0.00065 0.065 14.6 0.5 1 23 709 731 709 731 0.98 14 19 4.7e-05 0.0047 18.2 0.0 1 23 735 758 735 758 0.95 15 19 0.018 1.8 10.1 1.6 2 23 794 816 793 816 0.92 16 19 0.0014 0.14 13.6 1.1 2 23 824 846 823 846 0.96 17 19 0.00085 0.085 14.3 0.4 1 23 852 874 852 874 0.98 18 19 0.0025 0.25 12.8 2.9 3 23 882 902 880 902 0.98 19 19 4.5e-05 0.0045 18.3 5.1 1 23 908 931 908 931 0.98
Sequence Information
- Coding Sequence
- ATGGTGTCAAGATCAGAAGTTTTTACAAAGAATTTACAGACCCAACTCGAGTCAAGTCCTAGAGAGCTGAACGAATCAACGACGACTCCAGACAGAAGATCTATATTCAAGGAAAAACTGAAACATATACACAATGCTAGAACGATCTTGCTTAATTCTAATGCTACACCTATCCGCACTTATACCGGTAAAAAATTTACATGTTCTTTCTGCTCAGAGGAATTTTCTATTCCAAAGGATTTAAGAGATCATACTCTTAAAAATcacaataataatgaaaaagaaAAGTTCATGGGTAAATCTTCTATGTCTAAGTTTGTGGTCAGACTGGATATCACTGGACTAAAGTGTACAATCtgtgatgaaaattttgaagaTTTGCAACAATTTATTAATCATTTAATTATAGATCACGGAAAATTGTATCATAAAGACATAAAGAATCATGTTGTACCTTTCAAATTTAACAGTGATAAATACACTTGTGTTGTTTGTGATAAAAGCTTCCATTCGTTTAAAGCTTTACTTGACCATATGAATTTACATTACAGAAACTATGTATGCGAGATCTGTGACGCTTCTTTTGTCAACTCTGTAACTCTTAGACATCACGGAACAGCACATAAGCAAGGTGAAAATAAAAAGCACGCCCATcagaaatattttcatttaaatgaaCGTCATAGATATAAATGTAATTACTGTGACGAAACATTCGCAAAATATTCTGTTAAGAATAATCACATGGTTCAAATGCATGCCCTAAAGGTAAATCGTGCTATGGAAAATTCAACGTCAAATGTGGTGCAAACATTAGAAGTTTATGCAAAGAATTTACAGACCCAACTCGAGGCAAAGCTTAATAACCTGATCGAATGCACCACGACTCCAGACAGAAGATCTATATTCAAGGAAAAACTAAAACATATACACAATGCTAGAACGATCTTGCTTAATTCTAATGCTACACCTATCCTCACTAATACTAGTAAAGGATTTACATGTTGTTTCTGCTTAGAGGAATTTTCCATTCCAAAGGATTTAAGAGATCATACTCTCAAAAATCACAATAATAGTGAAAAAGAAAAGTTCATGGGTAACTCTGCTATGTCTACGTTTGTGGTCAGGCTGGATATCACTGGACTAAAATGTACAATCtgtgatgaaaattttgaagaTTTACAACAATTTATTAATCATTTAATTATAGATCACGAAAAATTGTATCATACAGACATAAAGAATCATGTTGTACCTTTCAAATTCGACAGTGATAAATATACTTGTGTTATTTGTCATACAATCTTTGAGCGGTTTAAAGTTTTATCAGAACATATGAATTTACATTACAGAAACTATGTATGCGAGATCTGTGATGCTGCTTTTGTCAACTCGGTAAATCTGGGACAGCACAAAGCAGCAGCACTTAGACAAGGTGAACTTAGCCACCAAATCGGTGaaaaaattttggaaaaaagaaaaaaacagcaCGCTCATGAGAAAAATGttcatttaaatgaaaatcgcagaaataaatgttattattgtgaCGAAAGATTCGCAAAATATTCTGACAGGAATGATCACATGGTTCAAACGCATGCCATAAAGGTACGGCGCGCTATGAAATGTTCTATGTCAAAATTGGTGCAAAGATCAGaagttgttaaaaataatttacagacCCAACTCAAGTCGAGGCCTAGAAAGCTGAAGAACGAATCTACGACGACTCCCAACAGAAGATCTATATTCAAGGAAAAActaaaacatatacataatgCTAGAACGATCTTGCTTAACTCTAATGCTACACCTATCCGCACTTATACTGGTAAAGGATTTACATGTTCTTTCTGCTCAGAGGAATTTTCTATTCCAAAGGATTTAAGAGATCATACTCTTAAAAATCACAATAATAGTGAAAAAGAAATGTTCATGGATAACTCTACTATGTCTACGTTTGTGGTCAGACTGGATATCACTGGACTAAAATGTACAATCTGTGATGAAAATTTTGTAGATTTACAACAATTTATTAATCATTTAATTATAGATCACGAAATATTGTATCATACAGACATAAAGAATCATGTTGTGCCTTTCAAATTCGACAGTGATGAGTACACTTGTGTTCTTTGTCCTAAAAGCTTTGAACGgtttaaagttttattagaaCATATGAGTTCACATTACAGGAACTATGTATGCGAGATCTGTGACGCTTCTTTTGTTAACTCGGTAGCTCTTAGAAATCACAGAAACGCAGCACATAAGCAAGGTGAATTCTGTTGCAACTATTGTGCCAGAGTTTTCGGCAATGTAACGAAAAAGCGATTTCATGAGAAAATTGTTCATTTAaacgaaaatcttagaaataaatgtcATTACTGCAACGAAAAATTTGCAGAATATTCTGACAGGAATGAGCACATGGTTCAAATGCATGGGGTGAAGCGTCTCATACTGAAATGTAAGGCTTGTGATAGGACTTTTACCAATAGAAAGATTTTGACGGTACACATAAAGCGTGACCATTTAATGGAACGGAATTTCGAATGCGATCAATGCGATGCCACCTTCTTTTCAGGCCGAGCACTTAAGATGCACATGTTAAAGCATACGGGAGTAAAGAAGTATGGTTGTGAAGTGTGTTTTAAGTTTTATGGGAGGAGGTGTACGTTGAAGCAACATATGCGGATACACGCAAACGACAGGAGGTTCAAATGCGAACATTGCGGACAAGCTTTCGTGCAGAAGTGTAGCTGGAGGAGTCATATGCGTTCAAAACACGGTGAAATTGtgtga
- Protein Sequence
- MVSRSEVFTKNLQTQLESSPRELNESTTTPDRRSIFKEKLKHIHNARTILLNSNATPIRTYTGKKFTCSFCSEEFSIPKDLRDHTLKNHNNNEKEKFMGKSSMSKFVVRLDITGLKCTICDENFEDLQQFINHLIIDHGKLYHKDIKNHVVPFKFNSDKYTCVVCDKSFHSFKALLDHMNLHYRNYVCEICDASFVNSVTLRHHGTAHKQGENKKHAHQKYFHLNERHRYKCNYCDETFAKYSVKNNHMVQMHALKVNRAMENSTSNVVQTLEVYAKNLQTQLEAKLNNLIECTTTPDRRSIFKEKLKHIHNARTILLNSNATPILTNTSKGFTCCFCLEEFSIPKDLRDHTLKNHNNSEKEKFMGNSAMSTFVVRLDITGLKCTICDENFEDLQQFINHLIIDHEKLYHTDIKNHVVPFKFDSDKYTCVICHTIFERFKVLSEHMNLHYRNYVCEICDAAFVNSVNLGQHKAAALRQGELSHQIGEKILEKRKKQHAHEKNVHLNENRRNKCYYCDERFAKYSDRNDHMVQTHAIKVRRAMKCSMSKLVQRSEVVKNNLQTQLKSRPRKLKNESTTTPNRRSIFKEKLKHIHNARTILLNSNATPIRTYTGKGFTCSFCSEEFSIPKDLRDHTLKNHNNSEKEMFMDNSTMSTFVVRLDITGLKCTICDENFVDLQQFINHLIIDHEILYHTDIKNHVVPFKFDSDEYTCVLCPKSFERFKVLLEHMSSHYRNYVCEICDASFVNSVALRNHRNAAHKQGEFCCNYCARVFGNVTKKRFHEKIVHLNENLRNKCHYCNEKFAEYSDRNEHMVQMHGVKRLILKCKACDRTFTNRKILTVHIKRDHLMERNFECDQCDATFFSGRALKMHMLKHTGVKKYGCEVCFKFYGRRCTLKQHMRIHANDRRFKCEHCGQAFVQKCSWRSHMRSKHGEIV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -