Esim022745.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990117.1:6612147-6632567[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2.9e-05 0.0029 18.9 2.2 1 23 420 442 420 442 0.97 2 20 0.0085 0.85 11.1 0.6 1 20 448 467 448 470 0.93 3 20 0.00013 0.013 16.9 6.9 1 23 489 511 489 511 0.98 4 20 0.00015 0.015 16.7 4.9 1 23 517 539 517 539 0.99 5 20 3.8e-05 0.0038 18.5 5.3 1 23 545 567 545 567 0.97 6 20 1.2e-05 0.0012 20.1 7.3 1 23 573 595 573 595 0.97 7 20 7.4e-07 7.4e-05 23.9 2.9 1 23 601 623 601 623 0.97 8 20 0.0001 0.01 17.1 6.7 1 23 629 651 629 651 0.97 9 20 0.0001 0.01 17.1 6.5 1 23 657 679 657 679 0.97 10 20 5e-07 5e-05 24.4 1.9 1 23 685 707 685 707 0.98 11 20 5.1e-05 0.0051 18.1 7.9 1 23 713 735 713 735 0.98 12 20 8.2e-06 0.00082 20.6 6.6 1 23 741 763 741 763 0.98 13 20 1e-05 0.001 20.3 4.4 1 23 769 791 769 791 0.98 14 20 3e-06 0.0003 22.0 6.1 1 23 797 819 797 819 0.97 15 20 7e-07 7e-05 24.0 5.0 1 23 825 847 825 847 0.98 16 20 3.1e-06 0.00031 21.9 6.0 1 23 853 875 853 875 0.98 17 20 1.7e-05 0.0017 19.6 8.0 1 23 881 903 881 903 0.97 18 20 3.7e-05 0.0037 18.6 8.6 1 23 909 931 909 931 0.98 19 20 0.0013 0.13 13.7 0.6 1 23 938 960 938 960 0.95 20 20 0.018 1.8 10.1 5.1 1 23 971 993 971 993 0.99
Sequence Information
- Coding Sequence
- ATGAATCAAGAACACCATAGTATGAATACGGGTGGTGGCCAGCCTCCAGGAAATTCTGAGTCACAGAATCAAAGAGTTCAAGCCGTACAGCAACAGAATTTACCCGCCACAACGTCTGCTACTGATTTACGAGTGAATTCTGCTGTAAACGTAGCTTTGTCCAGTGTCGCCAAATATTGGgtgtttacaaatttatttcctGGACCTATACCACAAGTATCTGTTTACGGACTACCTGCCAATGCTAGACTGGAAAATGGGAAACCTGTGCAGGATCTCAGCCAAACTCATGCAAGTATATTGAACGGTGATCCAAATATAATACTTGGACATCATGCTGGTCAATCACAAGTTACAGTATCTACTGCTGGAGGACAACAAATACCTGTATCACAGATCATTGCCACACAATCTGGACAAAGTCATGaagcTTTGGTCGCCCACAGTCAACAACAAGCTGAAATGGCAGCAGCCCAGGGATCCAATAACAACCAACAGATCTCGGTGAACTCTGGCCAGTCCAACCATCATCAGGTACCCAATACTCGGGTCGAATATGTACAACACCATGATATAGATATGGGACATCATTCACAACAGCACATGATGCAGCAGCAGCTAATGGCGGCGTCGAGGCCTGAACACGCGAACCAACAGATCCAACTGACGGTCAGCGAAGACGGCATAGTGACCGTAGTGGAGCCGGCTGGCAGTAAGATGGTCGACAAGGAGGAACTTCACGAGGCTATCAAACTACCCACAGACCATGGGCTCACTGTTCACCAGCTGCAGCAAATTGTTGGACAACAGGTGATAGACAGTGTGGTGCGCATTGAGCAGGCGACCGGCGAGCCGGCCAACATACTGGTCACACACAACCCTGACGGCACCACCTCGATAGAAGCCAGCGCCACGGAAACACTCATCGTGAAGGACGAGAAGAACCCGGCCAAGATTGAGACGGCACAGTTTGCGATACCCGCTGAGATCAAGGACATCAAAGGCATTGATTTGAAGAATGTAAGCACAATAGGAATGGAAGGTACCGTTGTCAAGATCTCGGCCGGCGCGGCTGAGCACGATCTTCATGCTATGTACAAGGTGAACGTTGAAGATCTGTCACAGTTACTGGCCTATCATGAAGTGTTTGGAAAATTGAATTCCGAGGGTCAACCGCAAGCTAAGGCGATAAGCGAGGTTGAAGTGGAAGCTGGCACCAGCACAGCCATGTCTGAATCGGAATCATCGCCGGGACACCATTCGTGCGACATATGCGGGAAGGTGTTCCAGTTTCGTTATCAGCTTATTGTTCACAGGCGTTATCACGGCGAAAGTAAACCTTTCGCGTGTCAAGTTTGCGGATCAGCCTTTGCGAATCCCACGGAGTTATCAAGACATGGGAAATGTCATCTTGCTGGTGATCCAAACGACAGACACGCAAAACGGCTGGCACAAGACAAACCCTACGCGTGCACCACTTGCCATAAAACATTCTCCAGGAAGGAGCATTTGGATAACCATTTCCGAAGTCACACCGGAGAGACTCCATAcaaATGTCAGTTCTGCGCAAAAACGTTCACCCGCAAGGAGCACATGGTGAATCACGTGCGAAAACATACGGGAGAAACTCCGCACCGATGCGACATCTGCAAGAAAAGTTTCACAAGAAAAGAGCATTTCATGAACCATGTCATGTGGCATACAGGTGAAACGCCACACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCACTTAGTGAATCATATGAGGTCACATACGAACGATACGCCGTTTCGATGTGAACTTTGCGGCAAGTCGTTCACCAGAAAAGAGCACTTCACCAATCACATATTGTGGCACACGGGGGAGACCCCGCATCGGTGCGATTTTTGTTCCAAGACGTTCACACGTAAGGAGCATCTGTTGAACCATGTGCGGCAACACACGGGCGAGTCCCCGCACAGATGTAACTTCTGCAGCAAGTCCTTTACGCGTCGGGAGCATCTCGTCAACCACGTGAGGCAGCACACCGGAGAAACGCCATTCCAGTGTGGATATTGTCCCAAGGCCTTCACAAGGAAGGATCATTTAGTGAACCACGTCCGCCAGCACACAGGGGAATCTCCACACAAGTGTTCGTTCTGTACCAAGTCGTTCACTCGCAAGGAGCACCTCACTAACCACGTCCGACAGCACACGGGCGAGTCGCCGCACCGGTGTACGTACTGCGCCAAATCGTTTACAAGGAAGGAACATCTTACCAATCATATCAGGCAACACACGGGTGAAACACCTCACAAGTGTACATTCTGTCCTCGAGCATTTGCAAGGAAGGAGCACCTCAACAACCACATCAGGCAGCACACCGGGGTCACTCCTCACTCGTGCTCCTACTGCAACAAGAGCTTCACTCGAAAGGAGCATCTCGTCAATCACATACGGCAACACACTGGCGAAACTCCATTCAAGTGCACTTATTGTTCGAAATCCTTCTCACGTAAGGAGCACCTGACCAATCATATTAATCTACACACGGGAGAGACTCCGCACAAATGTCCCTTCTGCACCAAAACATTCTCAAGAAAGGAACATTTGACTAATCATGTCAGAATCCACACCGGCGATTCGCCTCATCGATGCGAATTCTGTCAGAAGACGTTCACGCGGAAGGAGCATCTCACGAATCACATGAAACAGCACACGGGCGACACTGCGCACACGTGCAAAGTGTGCTCCAAACACTTTACGAGGAAAGAGCATCTTGTTACACACATGAGGTCACACAGTTGTGGTGAGCGGCCTCACGTCTGCGGCGAGTGCGGTAAATCGTTCCCATTGAAAGGTAACCTGCTGTTCCACGAGCGGTCACACAACAAGGGCAATGCTAACGCCAACAGGCCGTACAGGTGTGAAGTTTGTTCCAAGGAGTTTATGTGTAAAGGACATTTGGTGTCGCATAGGCGAACACATAATGAGGGTGGTGAAGCAGTTGCTCCCAGTACTGACACCCCAACAGAGGGAGAAGACTGCACCGATTGCAATAGTAAATGTGTGAAAATTGAACCAGAACGAACAGAAAGAAAACATGATATAAGGACATCTGTGGAGCCGCGACCAGCTGAAAATAATGTTGCACAGCCTCAACAAAATACCGCCTCCACTCTGATGCAAATATCTAATCAgCAGCGCGGCGTGGCTGGAGTGCCGCCGGGAACTTTCAGCGGGCAGCACGCAGCACCCCCGCTGCACCACCCCGTCACCGTCAACTACTAG
- Protein Sequence
- MNQEHHSMNTGGGQPPGNSESQNQRVQAVQQQNLPATTSATDLRVNSAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPANARLENGKPVQDLSQTHASILNGDPNIILGHHAGQSQVTVSTAGGQQIPVSQIIATQSGQSHEALVAHSQQQAEMAAAQGSNNNQQISVNSGQSNHHQVPNTRVEYVQHHDIDMGHHSQQHMMQQQLMAASRPEHANQQIQLTVSEDGIVTVVEPAGSKMVDKEELHEAIKLPTDHGLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASATETLIVKDEKNPAKIETAQFAIPAEIKDIKGIDLKNVSTIGMEGTVVKISAGAAEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQPQAKAISEVEVEAGTSTAMSESESSPGHHSCDICGKVFQFRYQLIVHRRYHGESKPFACQVCGSAFANPTELSRHGKCHLAGDPNDRHAKRLAQDKPYACTTCHKTFSRKEHLDNHFRSHTGETPYKCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTFCPRAFARKEHLNNHIRQHTGVTPHSCSYCNKSFTRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLTNHINLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGDSPHRCEFCQKTFTRKEHLTNHMKQHTGDTAHTCKVCSKHFTRKEHLVTHMRSHSCGERPHVCGECGKSFPLKGNLLFHERSHNKGNANANRPYRCEVCSKEFMCKGHLVSHRRTHNEGGEAVAPSTDTPTEGEDCTDCNSKCVKIEPERTERKHDIRTSVEPRPAENNVAQPQQNTASTLMQISNQQRGVAGVPPGTFSGQHAAPPLHHPVTVNY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01030446;
- 90% Identity
- -
- 80% Identity
- -