Esim007793.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Euproctis similis
Gene Symbol
-
Assembly
GCA_905147225.1
Location
LR990107.1:5484187-5488788[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.00036 0.036 15.5 1.3 2 21 149 168 148 169 0.92
2 21 0.00022 0.022 16.1 0.3 1 23 176 198 176 198 0.97
3 21 0.00022 0.022 16.1 7.0 1 23 204 227 204 227 0.97
4 21 2.2e-06 0.00022 22.4 1.5 1 23 233 255 233 255 0.97
5 21 0.00028 0.028 15.8 2.3 1 23 280 302 280 302 0.99
6 21 3e-08 3e-06 28.3 0.8 1 23 308 330 308 330 0.99
7 21 3.2e-05 0.0032 18.8 1.2 1 23 338 361 338 361 0.97
8 21 9e-05 0.009 17.3 6.2 1 23 367 390 367 390 0.95
9 21 8.9e-05 0.0089 17.4 3.6 1 23 396 418 396 418 0.98
10 21 2.5e-06 0.00025 22.3 0.2 1 23 424 446 424 446 0.99
11 21 0.00049 0.049 15.0 2.0 1 23 452 475 452 475 0.98
12 21 2.3e-07 2.3e-05 25.5 1.0 1 23 481 503 481 503 0.98
13 21 4e-07 4e-05 24.7 2.8 1 23 509 531 509 531 0.99
14 21 7.3e-05 0.0073 17.6 2.5 1 23 537 559 537 559 0.99
15 21 3.4e-05 0.0034 18.7 3.4 1 23 565 587 565 587 0.99
16 21 7e-06 0.0007 20.8 0.1 3 23 595 615 594 615 0.97
17 21 0.00026 0.026 15.9 0.2 1 23 621 643 621 643 0.97
18 21 0.017 1.7 10.2 0.2 2 21 650 668 649 669 0.94
19 21 0.00016 0.016 16.5 1.0 1 23 694 716 694 716 0.98
20 21 1.2e-07 1.2e-05 26.3 2.1 1 23 722 744 722 744 0.99
21 21 0.00024 0.024 16.0 8.9 1 23 749 772 749 772 0.98

Sequence Information

Coding Sequence
ATGTCTATTCGAAAGCGGCCTTATTGTATATTCGGATGCACTTACCTAGGTACACATATGCACAGCTTTCCACATCCAGAAAAGAGGCCAGGAATGTTTAAGGAATGGGTGTCCATTGTTGGGAACAAACTGAAACAAACTGATCCTTTCAAGATTTACTTACACAATGAAGTGTGTATCTACCATTTCAAATTGGTTCAAAGAGCGGCAAGGCGCCGACTAAAGGAAACCAAACTGTCGCCCCCTCTGGAAGatGCTGCTCCCGTGGCAGTGAAAACTGAAATACTGGAAGAGGACTTGCAAAGTATAAATTCAGGTTGTCTTGAGATTGATGTGAAACCTGAACCTGATAAAGCTATATTTAGTCAATGTTTAGAGGATCAAATTGTGATGAATGGTGGCACAAATagtaatattgatttaaaagCCGTTGTAACACCAATTAAGTGTGATAGATGTAACAAAAGTTTTAATGACCAGTATGATCTGATGATACACAGTTGCACAAACTTGGATATAAAACCATTTATATGCGACATATGTGGGGTTTGTTTTAATCTTGAATCTGATTTAGTGAATCACAATCGTATTCACACCGGTGAAAAACCTTATAAATGCTATTTATGTGGAAAATGTTATAGCCATGAACATAGTTTACAAAAACATGTTCTTAGAATACACGATGATGAAAAACCATATATATGCAGTGTGTGCGGTTGGTGTTTTAACCGGGAGAGCGATCTGATAAAACACATTTGTGCACATAATCAAACAGAGGAATATGCCAATGAAATATCTGATAAAATTGATTCACACGAACAAGAGGACAAAACACcgtttaagtgtgataaatgcgGAAGCTGTTTTGAACTCGAATTGGAATTAACAAGACATATTCGCCGGCACAATGGTGAGAAACCTTACCAATGTGATATATGTGGAACAAGTTTTAGCCGAGAAATTACATTGAAACAACATATGCGTACACACGTCGGTGAAATGCCCCAAAAATTTAAATGCGatatttgtgtaaaaagttTCAAGAACAAAGCTGTTTTAATGAAGCATAATCGTAAAATACACGCTGATAATAAACCACATAAATGTCATATATGTGGAATTTGTTGTAGTCGAGCGGACGCTTTAAAGAGACATATATTTAGTATACATATGTGTGAAAAGCTACACAAATGTGATCAATGCGGTAAAAGTTTTACTGGAAAACTTAAATTGTACAATCATGTTCGTCGGCATAAAAGCAAAAAGACTTATGAGTGTGACATATGCGGAAAATTTTCTAATGACAAATTTGATTTAATAGCTCATCTCCGCACTCACAGCGGGGAGAAACCTTATAAATGTCACATGTGCGAAGCTTCTTACAGCAGAGGTAATACTCTACGAAGTCATATTATGCGTTCGCATACCGGAGAAAAGCCGCACAAATGTGAGACGTGTGGCAAAAGTTTTAGCGTGAAAGTTGATTTAGTAAGACATAtacgtatacacactggtgaaaaaccatttaaatgtgaagtGTGTGGAAGATGTTTTAACCGAGAGAATAGTTTGAAAATGCATATGCGTATACACACTGGCGAGAAGCCGTACAAGTGTGAACAGTGCGGGCAACGTTTCAGTCTGATGAACTGTTTGAATGCACACATTCGTAGACATACTGGTGAAAAAGAATTCAAATGCGATGTGTGCGGCAAACATTTTCTATTGCGAAGCAATCTATACCAGCATATGCGAACGCATACTGTTGGCAAAACAAATATATGTGACATTTGTGGCAAAGGATTTGTTCGGGAGAAAAATTTAAGGGAACACATTTATATGCACAACGGGGAAACTCCTTATGTATGTGATATGTGCGGTGCCAGTTTTTATCAAGAAAAACGTTTACAAGATCACATTCTTCAACACACCAGTGAGGAGCCAAAGAAATGTGATGCGTGCGGCAAAAGTTTTGTACCTACCTTGTTTCGTAAACATCTTAGAATTTGTGTTTACAATCAGTCTGCAGACAGAATTTTGGAACTAAATAGGGCTTCGGCGAAACGTATTAAAAATCGGTTTCAATGCGATATATGCAAGAAATATTTCAGCGAAAAATACGTTTTGAAAGGTCATATGAACGGACATATCGGTATAAAACCTTACAAATGCGATAAATGTGAAAGAAGTTTCACACAAAAGGGTCTTTTAACACGTCACGTGCGTACACACACCGGTGAGAAGTATCAATGTGACATATGTTATAAATGTTTCACCCGTAGGCACAGTTTGAATTATCATAGGAAGAAAACACATGAAATAACAATCAACTGA
Protein Sequence
MSIRKRPYCIFGCTYLGTHMHSFPHPEKRPGMFKEWVSIVGNKLKQTDPFKIYLHNEVCIYHFKLVQRAARRRLKETKLSPPLEDAAPVAVKTEILEEDLQSINSGCLEIDVKPEPDKAIFSQCLEDQIVMNGGTNSNIDLKAVVTPIKCDRCNKSFNDQYDLMIHSCTNLDIKPFICDICGVCFNLESDLVNHNRIHTGEKPYKCYLCGKCYSHEHSLQKHVLRIHDDEKPYICSVCGWCFNRESDLIKHICAHNQTEEYANEISDKIDSHEQEDKTPFKCDKCGSCFELELELTRHIRRHNGEKPYQCDICGTSFSREITLKQHMRTHVGEMPQKFKCDICVKSFKNKAVLMKHNRKIHADNKPHKCHICGICCSRADALKRHIFSIHMCEKLHKCDQCGKSFTGKLKLYNHVRRHKSKKTYECDICGKFSNDKFDLIAHLRTHSGEKPYKCHMCEASYSRGNTLRSHIMRSHTGEKPHKCETCGKSFSVKVDLVRHIRIHTGEKPFKCEVCGRCFNRENSLKMHMRIHTGEKPYKCEQCGQRFSLMNCLNAHIRRHTGEKEFKCDVCGKHFLLRSNLYQHMRTHTVGKTNICDICGKGFVREKNLREHIYMHNGETPYVCDMCGASFYQEKRLQDHILQHTSEEPKKCDACGKSFVPTLFRKHLRICVYNQSADRILELNRASAKRIKNRFQCDICKKYFSEKYVLKGHMNGHIGIKPYKCDKCERSFTQKGLLTRHVRTHTGEKYQCDICYKCFTRRHSLNYHRKKTHEITIN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-