Basic Information

Gene Symbol
-
Assembly
GCA_905147225.1
Location
LR990104.1:21901533-21903944[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.9e-07 0.00028 21.8 0.1 3 45 285 329 283 330 0.90
2 4 1.2e-07 0.00019 22.4 0.1 2 44 337 383 336 385 0.95
3 4 2.1e-10 3.2e-07 31.3 0.0 1 43 389 431 389 433 0.97
4 4 8.4e-05 0.13 13.3 0.0 3 45 441 485 439 486 0.90

Sequence Information

Coding Sequence
ATGGATACAGACTGGTTCTCCAATATGAAAATGGAAGATAACTGTGATACTAACGACGAGGACGACGACTACGAAGACGACGATGAAGAAGAAATTCGCCAACTTGACGCTGTATTAGAGGAGGCTGATATTGATATTTGTGAGAATAGTTCAGATGAACCGTTAAAACGGCAATCGCACCCTGGCTCGTCACAAATTGTATCATCGTCATCATATAATACCAGAGCCTCTACACCTACAGAAATCTCGAAAATAGATTCAGTATTGGCACTCAATAAAATGTACGATGAAAAATTACGACGTCTAGAAAAAATTTTAGGTTTTCGTTTACGCGAATGCCGCACTAAACTTAAAGATATACAAACAAACACCTCGTCTACAGATAAACAAGAACTATTTCGTTATATAAACTGTGGTCGACCATATTTTAAAGATCAAGCTAATTTTCCCGCGCCAGTCAATGAAGATACTATTATTGTTAAAAATCAAATGTATGACTTTTCCTTAGTTTCTTCAGTTCCAGGGTGGACAGTCCGTGATAAAAACCAATTCACTGATGTGATGACAGAAATTTCATTAAGATTAAAGAAAGATGCTtgtaatgaaaaaattttggatCTACAACAATCTCTTGTGAAGAAACCAAACAACAAGGATGTCCTCAACGAGATAGCCAAGCTGGAGAAAGAGATGAGTATGTTGAATTCAAAAACGCCATTATCAAAACTCGCACTGCCGCTAGATGAGGAATATGATTGGCATATGCTAGCTGAGAATTTAAACAAAAGACATACTCCACACGAGTACCGCTGTCTATGGAGATtatattttcatccaataataaataaatctggTTGGAATAATAGTGAACACAGCCAGTTACAGGCGATTGCAGCTGCCCAGAATTTTCAAGATTGGGATGAGATAGCCAAGAAATTAAACACAAACAGAACTGGGTACCAATGCTTTGTATATTACCGTACAAATATCAATACCACTTCTATTGGAAAGAAATGGACCCCTGAAGAGGTCACATATCTGAAAAGGTTAGTTGACTATTTTAAGGAAGACTATTATATACCATGGGGTAAAATAGCAGGAGCAATGGAAAACAGAACTAAGATACAgatttacaataaatacttaCGTATTATTGAACAGAGAAAAGGCAGATTTTTACCAGAAGAAGATGCTGTTATACTAAATTGTGTGGAAACATTTGGGCCTAATTTCAGGAGAATACGAGAATATTTAGCCCATAGATCAATAGTCCAAATACGCTCAAGATACAATGTACTTAGTAAAATGAGAATTTCAACTGTTTGGTCAGTGGAGGATGACAAGAGACTAATTCAAATAATGAGCAACCAGGACTCAAAAATGACATTTTCAATTGCTACCAAATTTTTTCCAGGTAGGACTAGGATGAATATTAGATCCAGGTATATGACAGTGATAAAATGGCTAGCAAATCATCCTAATTTAGGCATAGAACATGCTCCTAGGCGAGGTGCACGTCGTCTCAAACATGGACATGCTACCTGTGACTTAAACCAAGCtattgaaaatctaaaaaatactttaaatacagAAGTGCAAACTAAAAAAGTTCGCAGGAAGATTAGTAGAGAGTCTGATGAATGTGATATAGAAGATGCTATTGTTGCAACTCTAGTTAATGAGGCAGTGAAAGAACAAGAATTGGGGAATCACcccattgaaaataaatttatattgccagATGAAACAATAGTTAGTAACAAACAACTAGATTTAACTAACTTGCGaaaatgtcttatatatttaggaTCAAAGTTAAATAAAGTCCTCTATAAAcagtccagtcattataaagACTACCCTGATCTTGGCAATTCAAGTCAGGATGTTAGTCTATTTAAAGTCAAGTCGTATTCTAAAAAACAATCGGTTGTGACAATTAATGTTAAAGGGTCCCCTGACATATGGGGAAATGCTAGACTTGGCCAGCGACTCTATGTTCTTCCTCCTCATTATGCCACTATAACAGGTTGTAAAGCTTTGATGTCACATGTTTCTGCACTGTACTCTAGTACAATGAGTTTACCTGTTCTATCAAAgcgtaataatttattaaaacagcAAATGGAAATGCTGCTAGAACGTTTCTATATATTGTTCCTTTGGCCAATGTTACTTTCAAATGAGGGACCCactgattttaataataccAAATTACGTAAAATAGATTCCTATTATGTGACTGAAAATGAATATACCTTCCCTAAACCAACAAAAATAATTGTCAAAAACGAAAATTCCGATAAATACCACGTGCATAAATCTGAAAAAATTGATTCAACTGATAGCAAAGTTGATAGTATAGATAAAATCATTATTGAACTtcataaagttaataatatgGACACATAG
Protein Sequence
MDTDWFSNMKMEDNCDTNDEDDDYEDDDEEEIRQLDAVLEEADIDICENSSDEPLKRQSHPGSSQIVSSSSYNTRASTPTEISKIDSVLALNKMYDEKLRRLEKILGFRLRECRTKLKDIQTNTSSTDKQELFRYINCGRPYFKDQANFPAPVNEDTIIVKNQMYDFSLVSSVPGWTVRDKNQFTDVMTEISLRLKKDACNEKILDLQQSLVKKPNNKDVLNEIAKLEKEMSMLNSKTPLSKLALPLDEEYDWHMLAENLNKRHTPHEYRCLWRLYFHPIINKSGWNNSEHSQLQAIAAAQNFQDWDEIAKKLNTNRTGYQCFVYYRTNINTTSIGKKWTPEEVTYLKRLVDYFKEDYYIPWGKIAGAMENRTKIQIYNKYLRIIEQRKGRFLPEEDAVILNCVETFGPNFRRIREYLAHRSIVQIRSRYNVLSKMRISTVWSVEDDKRLIQIMSNQDSKMTFSIATKFFPGRTRMNIRSRYMTVIKWLANHPNLGIEHAPRRGARRLKHGHATCDLNQAIENLKNTLNTEVQTKKVRRKISRESDECDIEDAIVATLVNEAVKEQELGNHPIENKFILPDETIVSNKQLDLTNLRKCLIYLGSKLNKVLYKQSSHYKDYPDLGNSSQDVSLFKVKSYSKKQSVVTINVKGSPDIWGNARLGQRLYVLPPHYATITGCKALMSHVSALYSSTMSLPVLSKRNNLLKQQMEMLLERFYILFLWPMLLSNEGPTDFNNTKLRKIDSYYVTENEYTFPKPTKIIVKNENSDKYHVHKSEKIDSTDSKVDSIDKIIIELHKVNNMDT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-