Esim029922.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990123.1:7646802-7647356[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-08 5.4e-06 26.9 0.0 3 35 18 50 16 54 0.94
Sequence Information
- Coding Sequence
- ATGGCTCCACGAAAACCAATTTCACAAAGAAAACGCCAAACTTGGAGCAAGGAGTCAATGAAAATGGCTATCGAAGACATGCGGAATAAGAAAATGGGCTCATTAAAAGCGTCCAAACTGTACAAAGTGCCCCGAACAACCTTAAGACGCTTAGCAGCTAAAATTGATGTATCTGCTGAAGAAGCTACTTGCGCGAAACTTGGAAGAAAACCAACATTGCCACAAGAATTAGAAAAAGAGTTAGTACTATACGTTCTGATAATGGAAGCAAAGTTGTTCGGCTTAGCCCGAAAGGATGTTATGGGGTTAGCCTATCAGctggtaataaaaaataatataactcatAACTTTTCGGCAAAAAATGAAAGCGCCGGTAAAGATTGGCTTAAATCATttttagagaggtatccagaactTTCTTTTCGTCGTCCAACAGGAACTTCTTTTGCTAGAGCCAAGGGTTTTAATAGAGAAAGTGTGAATCATTTCTTTGATCTCTATGAAAAATTGATGGATAACTATAAATTCCCTCCAGCCTTCCCTTGGCCATATTAA
- Protein Sequence
- MAPRKPISQRKRQTWSKESMKMAIEDMRNKKMGSLKASKLYKVPRTTLRRLAAKIDVSAEEATCAKLGRKPTLPQELEKELVLYVLIMEAKLFGLARKDVMGLAYQLVIKNNITHNFSAKNESAGKDWLKSFLERYPELSFRRPTGTSFARAKGFNRESVNHFFDLYEKLMDNYKFPPAFPWPY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01157612;
- 90% Identity
- iTF_01157612;
- 80% Identity
- -