Esim009111.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- JRKL
- Assembly
- GCA_905147225.1
- Location
- LR990108.1:1850065-1852203[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-08 5.3e-06 27.0 0.0 2 36 16 50 15 58 0.89
Sequence Information
- Coding Sequence
- atggtaaataattataaaagaaaatccaATCGAAATTCCTGGGATGAAGCCAGCATGAAAAATGCAATCGAGAAAGTGGCAGCTGGAGAAATGGGCCTCAATAAGGCTTCTAATCAATTCCTGGTACCAAAGACTACTCTGAAGAGAAAATTAGAGAAATATAAGGCTACTCAAAATATTGATACAGCCACACATAAGAAACTGGGTAGATTTGAACAAGTTTTTACTAAGGCTCAAGAGACTGAATTAGCTACTTATGTGAAACAGATGGAAAGTCGTTTGTTTGGATTAACCACAGAAAATCTAAAGAAGTTGGCATATGATCTAGCTGAGAGAAATAACATAAGTCACAATTTTGATACTTGCAAGAAGATGGCAGGTAGAATTTGGTTAGAAAACTTCTTAAAACGTAACCCAGATCTTAGCTTGCGTAAACCTGAACCAACATCTGCAGCCCGAGCAGCTGGCTTCAATCAAGTTgcagttaataatttttttgatTTGCTGACACATGCAATTGAAACTTATCATCTGAATCCAgataaaatttttaatgtaGATGAGACAGGAATCACAACAGTCCCCAAGAGTATATCAAGAATTATTGGCACAAGAGGGAAAAAACAAATCGGCTTATTAACTTCTGCTGAGCGGGGTCAACTAGTCACTGTAGTGTTTTGTTTTGGAGCAGATGGGTCCTATATGCCACCTCTGTTTATTTTTCCCCGTAAAAGGATGAAGCCTGAATTGATGAATAATGCACCTCGTGGATCTTGGGCTGAGTGCCATGAGAGTGGCTGGATTCAGAAAGATATTTTTACCTCTTGGTTTCGGAAATTCATTGTTTTTTCTAGAGCTTCCAAAGACAACCCGGTGCTGTTGATATTAGATGGACATAAAAGCCATACTATGAATCTTGACATTATTGATCTAGGGCGAGAGAATGGAGTCCAAATTTCGGCAACCCCACCGCACTGCACTCACCGTCTCCAACCACTGGATGTGGCTTTTATGAAACCTTTGTCAACTTATTACTCGGAAGCAGCACAGAATTGGTTGAGGATGAACCCAGGAAAGGTTATTACACAATTTCAGATTGCAGAATTGGTTGACAGAGCTTTTCAGAAAGCTGCTACAATGACAACAGCTTTCAATGCCTTTCGTGCCACAGGAATCTGGCCTTTAAATCGTGATATATTCACAGAAGCTGACTTTTTAGCAGCAGCAACTACTGACATCGAGCTACCGAATCCAAGTTCGAACCCGTATTCCTCGACAGTTGTTTCAAGCGCCAAAGATCCTCAGCCGTCAACATCAAAAGCTAGTCAGCCCTCACCACCAGTTTTGAGCACCGAAGATCTTCAGCCCTTAGTATCACGAGATAACCAGCCCTCGACATCAAGGACTAACGAGGCAGCAAACgatgttgaaaatatttcaGCATCCACTACTCCTTCCATCGAGGATATTGATTCAAGGGTGTCATCGCCGTCTATATTAAATGATAGTCAAATTGACAACCAACCTGCATTGTCTACCACTCCAACAAAAAATGCTGGCGAACTAACAGTTTCACGGCCATCACTTCTGAATGAAGGTGATACTGAACTTTCCACTTCCTCTACAATTATGGACAATGAAACTAGCAGTGTATTTCATTTCGGACCAAAAGATATAATGCCTTTTCCGAAAACAACTAAGACTAAAAGAGCCAACGTCAAACGAGGTAAAACAGCAATTATTACGTCATCACCCTACCGCCTTGAAATGGAAGCTTCTCAAAATAAACAGGCTGAGAAGATCAAGAAAGCACTTATTTTCCAGAAAGACATGAAACCTACAAAAAAAGAAGCAAAAAGTAAGACAGGAAAAAagaaaatcaagaaaaataaacGAAAAATTTCAGAAAAAGGAAAAGCTAGCAAGATGTCTGATGTAAAAAGGTCAAAAACTAAAAACAATTATAGTTCATCTGAGGAAGATGACACTGAGTGTCTGTACTGTTCTCATTTGTACTCAGAATCAACCGGGGGTTGGGTGCAATGTCCAGTATGTCGTTTATGGGCACACTGCCTTTGCGCAGGAGTCGAAGATGAGGACGAGGAGACAGAATTTACGTGTGAAAAATGTGCTAActga
- Protein Sequence
- MVNNYKRKSNRNSWDEASMKNAIEKVAAGEMGLNKASNQFLVPKTTLKRKLEKYKATQNIDTATHKKLGRFEQVFTKAQETELATYVKQMESRLFGLTTENLKKLAYDLAERNNISHNFDTCKKMAGRIWLENFLKRNPDLSLRKPEPTSAARAAGFNQVAVNNFFDLLTHAIETYHLNPDKIFNVDETGITTVPKSISRIIGTRGKKQIGLLTSAERGQLVTVVFCFGADGSYMPPLFIFPRKRMKPELMNNAPRGSWAECHESGWIQKDIFTSWFRKFIVFSRASKDNPVLLILDGHKSHTMNLDIIDLGRENGVQISATPPHCTHRLQPLDVAFMKPLSTYYSEAAQNWLRMNPGKVITQFQIAELVDRAFQKAATMTTAFNAFRATGIWPLNRDIFTEADFLAAATTDIELPNPSSNPYSSTVVSSAKDPQPSTSKASQPSPPVLSTEDLQPLVSRDNQPSTSRTNEAANDVENISASTTPSIEDIDSRVSSPSILNDSQIDNQPALSTTPTKNAGELTVSRPSLLNEGDTELSTSSTIMDNETSSVFHFGPKDIMPFPKTTKTKRANVKRGKTAIITSSPYRLEMEASQNKQAEKIKKALIFQKDMKPTKKEAKSKTGKKKIKKNKRKISEKGKASKMSDVKRSKTKNNYSSSEEDDTECLYCSHLYSESTGGWVQCPVCRLWAHCLCAGVEDEDEETEFTCEKCAN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00709161; iTF_00709162; iTF_00745611; iTF_00745612; iTF_01338668; iTF_01361551; iTF_01361552; iTF_01280209; iTF_01361553; iTF_01363057; iTF_01338643; iTF_01338646; iTF_01338648; iTF_01338649; iTF_01338682; iTF_00967964; iTF_01338652; iTF_01338680; iTF_01338650;
- 90% Identity
- iTF_01338650;
- 80% Identity
- -