Esim003676.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990104.1:19833006-19833317[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-11 3.6e-08 33.9 0.0 3 36 13 46 11 51 0.93 2 2 5.9 2.5e+03 -0.8 0.0 2 10 85 93 84 97 0.81
Sequence Information
- Coding Sequence
- ATGGAGCCACAAAAGCGGCGAAAAGTGTACAGTAAAACACAACTAGCCGAAGCAATCAAAGCAATTAATGACGGTACAAGTGTATATGAGGCATCAAAAAGGTTTAATATTCCTAAAACTACATTACGAGACAAACGGGACGGGAAATATAAGAATGAAATTTTCGGAGTTCAGCCGGTTCTTAATTTAAGTGAAGAAAAACAGATTGTAGACTGGATTCACTACCTTGGCAAGATGGGATTTCCAGTTACAAAAGAACAATTATTAGAAGCAGTGGCTAAGCTAGTCCAAAACTTAAATCGTCCAATATAA
- Protein Sequence
- MEPQKRRKVYSKTQLAEAIKAINDGTSVYEASKRFNIPKTTLRDKRDGKYKNEIFGVQPVLNLSEEKQIVDWIHYLGKMGFPVTKEQLLEAVAKLVQNLNRPI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01340019;
- 90% Identity
- iTF_00709135;
- 80% Identity
- -