Esim009674.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990108.1:11717531-11722237[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00098 0.42 11.3 0.0 1 18 30 46 30 50 0.90 2 2 7.3e-11 3.2e-08 34.1 0.1 4 39 56 90 54 94 0.92
Sequence Information
- Coding Sequence
- ATGATCGATCATTCAGTGATGAAAGCTATAAAGGTAGATGGAGcGGAACCACAACGAAGATATTATGAAgaagaaaatgatgatgatgatgaagaagaAATACAGCGGGCTATCAATGCAGTAAGAAGAGGAATGACTGAAATACAACGAAGATATTATGAACAAGAAATACAGCTGGCTGTCAAAGCAGTAAGAAAAGGAATGAGTATGAGATTAGCAGCCGTCACGTTTGGAATACCAAGAGCGACCATCTTCTATAGGTTAAGGCAAAGTCTCATCACTCGTAATTCCGGTGCATCAGAACGTAACACAAGACTATCTGCTGCTGAAGAAATTGAACTTGTCAACTGGGTCCAACTACAGACTGCAGGTGGAAATGTGTGGACCAAGAAAGATTTATTATACAATGTCTCCGAAtaccttaaaaatataaacagggATTATATGTTTAAAGATGGTGTGCCCGGAGAGAAATGGTATTGTTTGTTTTTGCGGAGACATCCAGAGATCAAGAAGTGTATGCAAATAAGGAAGCCGCCCCATAATAAAAAACGTAGAGACTATTAG
- Protein Sequence
- MIDHSVMKAIKVDGAEPQRRYYEEENDDDDEEEIQRAINAVRRGMTEIQRRYYEQEIQLAVKAVRKGMSMRLAAVTFGIPRATIFYRLRQSLITRNSGASERNTRLSAAEEIELVNWVQLQTAGGNVWTKKDLLYNVSEYLKNINRDYMFKDGVPGEKWYCLFLRRHPEIKKCMQIRKPPHNKKRRDY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -