Basic Information

Insect: Euproctis similis
Gene Symbol: -
Assembly: GCA_905147225.1
Location: LR990122.1:4083368-4107183[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 4e-08 1.7e-05 25.3 0.0 3 36 13 46 11 50 0.93

2 2 4e-08 1.7e-05 25.3 0.0 3 36 597 630 595 634 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	4e-08	1.7e-05	25.3	0.0	3	36	13	46	11	50	0.93
2	2	4e-08	1.7e-05	25.3	0.0	3	36	597	630	595	634	0.93

Sequence Information

Coding Sequence: ATGGAGCCACAAAAGCGGCGAAAAGTGTACAGTAAAACACAACTAGCCGAAGCAATCAAAGCAATTAATGACGGAGCAAGTGTATATGAGGCATCAAAAAGGTTTAATATTCCTAAAACTACATTACGAGACAAACGGGACGGGAAATATAAGAATGAAATTTGCGGAGTTCAGCCGGTTCTAAATTTAAGTGAAGAAAAACAGATTGTAGACTGGATTCACTACCTTGGCAAGATGGGATTTCCAGTTACAAAAGAACAATTATTAGAAGCAGTGGCTAAGCTAGTCCAAAACTTAAATCGTCCAAACCCTTTTAAAAATGGTATGCCTGGCAGATATTGgtttgagaattttataaatagacatcCAACAGTATCTAAACGCGTTGCACAAAATCTTCCTTCAAGCCGAAATCAAGTCACAGAAGCAGCTATACGTGCATGGTTCGATAGagtgaacaattattttatgacaaataatcTGCATGATGTTTTAGCAGATTCTAGACGAGTGTTTAACTGTGACGAAACTGCTTTCTTTTTATGCCCAAAAGAGAAAGAAGTTTTGGTTAGCAGAGGTAGCAAACGAGTGTATAATCGTGTTGCTAATGACGAAAAAGAGTGCTTGACTGTGCTTGTGAATGTTTCAGCTGACGGAAATCTAGCACCTACAATGATACTTTTTCCGTATAAACGTATGCCAAAAAATCTTGTACCTACAATACCTCGTGGATGGGGACTTGGTAACACGGAGTCGGGTTGGATGAACACAGAagcattttatgaatatataaccaACCGCTTCTATCCGTGGCTTGTTACAAATGAAATACCATTTCCAGTAGTTTTGTTTTTGGATGGTCACACATCTCACATATCACTTCCACTATCAACATTCTGTAAAGAAAAAGCAATCATCCTGGTAGCTTTACTTCCCAACTCTACACATATACTTAACGTAGCTGTTTTCAGACCAGTCAAAGGAACATGGAGGACTGTTGTGCATAAATTCAGAATTCAAAATAACTATGCCAAGCTTAAACGCACTGATTTTGCTCCGgcagtaaaaaaatgttttgaccaaTGCCTTAAGCCTGAAACCATACAGAGCGGATTTCTTTGTTGTGGATTATATCCATTTgatgcatcaaaaataaactactgtaaactgttgccaaatttaaagcatACAGAAGACAATCATATATCCACATCTGAACATGCAGAAAAATTTAAGCATGATTTCGAGGCTAGATTGTCACCTATAaccttaaaaagttttaaagattCGGGAGGCCAATGGATGGGAGATCCaacttataaaaagttattcgaatattggaaaaaaaatagcCCCGAAAACGCCATAAATCAAGAGAGTGAAAGTATTCTGCAATTAGGGGAATcaacactaaataataattttgtgaatgAAACGCCAGATATATCTGAGGCTATCctaaattttgatatagttgGTGAGAGTAATGAGCAAGGTTCAGCAGTATTGGGAGAAGAGGCATCCAACTTAtccttatttattgaaaaacctcTACCCTCGTCGCCTACTGTATACTTATTGACTGTACAAGATGAGTTCAACCAGTTTCAGCAGACATCTACTCCTCAACAAGATAATTTACTTCTACCATTTACCAACAAGTTAACACCCTTGTCCACTTCAATTCTTGCACCAGAAAATAATACTTCAATCGAAATAACCGCGGAGCAGCTACAAACACTTCAGAAaaATATGGAGCCACAAAAGCGGCGAAAAGTGTACAGTAAAACACAACTAGCCGAAGCAATCAAAGCAATTAATGACGGAGCAAGTGTATATGAGGCATCAAAAAGGTTTAATATTCCTAAAACTACATTACGAGACAAACGGGACGGGAAATATAAGAATGAAATTTGCGGAGTTCAGCCGGTTCTAAATTTAAGTGAAGAAAAACAGATTGTAGACTGGATTCACTACCTTGGCAAGATGGGATTTCCAGTTACAAAAGAACAATTATTAGAAGCAGTGGCTAAGCTAGTCCAAAACTTAAATCGTCCAAACCCTTTTAAAAATGGTATGCCTGGCAGATATTGgtttgagaattttataaatagacatcCAACAGTATCTAAACGCGTTGCACAAAATCTTCCTTCAAGCCGAAATCAAGTCACAGAAGCAGCTATACGTGCATGGTTCGATAGagtgaacaattattttatgacaaataatcTGCATGATGTTTTAGCAGATTCTAGACGAGTGTTTAACTGTGACGAAACTGCTTTCTTTTTATGCCCAAAAGAGAAAGAAGTTTTGGTTAGCAGAGGTAGCAAACGAGTGTATAATCGTGTTGCTAATGACGAAAAAGAGTGCTTGACTGTGCTTGTGAATGTTTCAGCTGACGGAAATCTAGCACCTACAATGATACTTTTTCCGTATAAACGTATGCCAAAAAATCTTGTACCTACAATACCTCGTGGATGGGGACTTGGTAACACGGAGTCGGGTTGGATGAACACAGAagcattttatgaatatataaccaACCGCTTCTATCCGTGGCTTGTTACAAATGAAATACCATTTCCAGTAGTTTTGTTTTTGGATGGTCACACATCTCACATATCACTTCCACTATCAACATTCTGTAAAGAAAAAGCAATCATCCTGGTAGCTTTACTTCCCAACTCTACACATATACTTAACGTAGCTGTTTTCAGACCAGTCAAAGGAACATGGAGGACTGTTGTGCATAAATTCAGAATTCAAAATAACTATGCCAAGCTTAAACGCACTGATTTTGCTCCGgcagtaaaaaaatgttttgaccaaTGCCTTAAGCCTGAAACCATACAGAGCGGATTTCTTTGTTGTGGATTATATCCATTTgatgcatcaaaaataaactactgtaaactgttgccaaatttaaagcatACAGAAGACAATCATATATCCACATCTGAACATGCAGAAAAATTTAAGCATGATTTCGAGGCTAGATTGTCACCTATAaccttaaaaagttttaaagattCGGGAGGCCAATGGATGGGAGATCCaacttataaaaagttattcgaatattggaaaaaaaatagcCCCGAAAACGCCATAAATCAAGAGAGTGAAAGTATTCTGCAATTAGGGGAATcaacactaaataataattttgtgaatgAAACGCCAGATATATCTGAGGCTATCctaaattttgatatagttgGTGAGAGTAATGAGCAAGGTTCAGCAGTATTGGGAGAAGAGGCATCCAACTTAtccttatttattgaaaaacctcTACCCTCGTCGCCTACTGTATACTTATTGACTGTACAAGATGAGTTCAACCAGTTTCAGCAGACATCTACTCCTCAACAAGATAATTTACTTCTACCATTTACCAACAAGTTAACACCCTTGTCCACTTCAATTCTTGCACCAGAAAATAATACTTCAATCGAAATAACCGCGGAGCAGCTACAAACACTTCAGAAGTATACACCATCACCCGAAAATGCAACCAAAGAGGCCGCTCCAAAAACAAGTGGGTTGCAACGGTCTCCACGAGCTACTGAGGAATTATCCAATACAATCTTGTATGAGGAGCCGCTCATCACCACTCTGTTCGGTCCTCAAGGAAATTGGCAATTGTGTAGTAACACTTACTATCAAATGAAAGGCATCTAA
Protein Sequence: MEPQKRRKVYSKTQLAEAIKAINDGASVYEASKRFNIPKTTLRDKRDGKYKNEICGVQPVLNLSEEKQIVDWIHYLGKMGFPVTKEQLLEAVAKLVQNLNRPNPFKNGMPGRYWFENFINRHPTVSKRVAQNLPSSRNQVTEAAIRAWFDRVNNYFMTNNLHDVLADSRRVFNCDETAFFLCPKEKEVLVSRGSKRVYNRVANDEKECLTVLVNVSADGNLAPTMILFPYKRMPKNLVPTIPRGWGLGNTESGWMNTEAFYEYITNRFYPWLVTNEIPFPVVLFLDGHTSHISLPLSTFCKEKAIILVALLPNSTHILNVAVFRPVKGTWRTVVHKFRIQNNYAKLKRTDFAPAVKKCFDQCLKPETIQSGFLCCGLYPFDASKINYCKLLPNLKHTEDNHISTSEHAEKFKHDFEARLSPITLKSFKDSGGQWMGDPTYKKLFEYWKKNSPENAINQESESILQLGESTLNNNFVNETPDISEAILNFDIVGESNEQGSAVLGEEASNLSLFIEKPLPSSPTVYLLTVQDEFNQFQQTSTPQQDNLLLPFTNKLTPLSTSILAPENNTSIEITAEQLQTLQKNMEPQKRRKVYSKTQLAEAIKAINDGASVYEASKRFNIPKTTLRDKRDGKYKNEICGVQPVLNLSEEKQIVDWIHYLGKMGFPVTKEQLLEAVAKLVQNLNRPNPFKNGMPGRYWFENFINRHPTVSKRVAQNLPSSRNQVTEAAIRAWFDRVNNYFMTNNLHDVLADSRRVFNCDETAFFLCPKEKEVLVSRGSKRVYNRVANDEKECLTVLVNVSADGNLAPTMILFPYKRMPKNLVPTIPRGWGLGNTESGWMNTEAFYEYITNRFYPWLVTNEIPFPVVLFLDGHTSHISLPLSTFCKEKAIILVALLPNSTHILNVAVFRPVKGTWRTVVHKFRIQNNYAKLKRTDFAPAVKKCFDQCLKPETIQSGFLCCGLYPFDASKINYCKLLPNLKHTEDNHISTSEHAEKFKHDFEARLSPITLKSFKDSGGQWMGDPTYKKLFEYWKKNSPENAINQESESILQLGESTLNNNFVNETPDISEAILNFDIVGESNEQGSAVLGEEASNLSLFIEKPLPSSPTVYLLTVQDEFNQFQQTSTPQQDNLLLPFTNKLTPLSTSILAPENNTSIEITAEQLQTLQKYTPSPENATKEAAPKTSGLQRSPRATEELSNTILYEEPLITTLFGPQGNWQLCSNTYYQMKGI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -