Esim031272.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990124.1:13773636-13781779[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8e-11 7.9e-09 36.0 0.0 4 39 144 180 141 184 0.90 2 4 9.5e-11 4.1e-08 33.7 0.3 2 39 196 233 195 237 0.92 3 4 2.6e-14 1.1e-11 45.1 0.2 2 45 251 295 250 295 0.96 4 4 7.2e-16 3.1e-13 50.1 0.0 1 44 302 346 302 347 0.95
Sequence Information
- Coding Sequence
- ATGCTCGGCCATACACTATGTTCGGTGAAACGTGAACCGCTGTCAGACGAAGAGGATACTGAGACGCAATATACGGccaattatattttaacaaatcagAACAATGGGCTGGAGGAGTTATCACCTCTGACACCGGCTGGTCCGGCTGCGACTCCAGTATGCGTCAAACAGGAACGCACTTCGCCACCAGCCACCACCCTCGAGGTCCTCGAGTGCACTTCACAACATGCTAAAaaCGTGTCCCTCCTGGCGATGATAAACAACAGTAATGTGTCCGGCTCAACAGAATATATGCCATTGACAGTTGTGAAAGATGAACTTTCGTCTGAAGGTGAGCAAGTCCATCTAAGCGGTGATGACACAAGTGACTCGTGTGAACGTCACATGTCTCCAGTGCAGAGGAACAGCCCCAAGAGCTGGACCCAGCACGACATGGAGCGAGCCCTACACGCACTTAGACAACACCAAATGAGCCTCACCAAGGCATCGGCAACTTACGGCATCCCGTCCACCACTCTCTGGCAGAGAGCTCACAGGTTAGGTATCGACACACCAAAGAAAGAGGGCGCCACCAAGACTTGGAGCGAAGCTGACCTGCGGGGAGCTCTGCACGCCTTGCGCGCCGGAGCTATATCGGCGAACAAAGCCAGTAAAGCTTACGGCATTCCGAGCAGCACCCTGTACAAGATCGCGCGGCGCGAGGGCATCCGGCTGTCGGCGCCGTTCAACGCGGCGCCCACAGCCTGGCGCCGCGCCGACCTGCGCCTGGCGCTGGCCGCCATCCGCAGCGGCGCCAGCTCCGTGCAGCGCGCCGCCGCCACCTACGGGATACCCAGCGGCACACTCTACGGTAGATGTAAGAGAGAAGGTATAGAGCTGTCTCGCTCTAATCCAACTCCTTGGTCCGAAGATTCAATGGGGGAAGCGCTTGAAGCAGTCAGacTCGGTCATATGTCAATCAACCAGGCGGCAATACACTTCAACCTACCCTACTCTTCGTTATACGGAAGATTCAAAAGATGCAAATATCAGATGCAGAACATCACAGACAACCAGCAGTCTACTCCAGATCATCAAAAACCAGTCCAGGAATCCCAGCAGATGTCTGTGCACCAGTGTCACTCGCAAGTTCCCGCGCCGCACACACACATGTACACACATGCGCACAGTTACGCGCAcgacgcacacacacacgcccAGTACACACACTACTACCACAGTTTCCAAGGTCACGGAACACATGGAATAGCGACCAGCTGA
- Protein Sequence
- MLGHTLCSVKREPLSDEEDTETQYTANYILTNQNNGLEELSPLTPAGPAATPVCVKQERTSPPATTLEVLECTSQHAKNVSLLAMINNSNVSGSTEYMPLTVVKDELSSEGEQVHLSGDDTSDSCERHMSPVQRNSPKSWTQHDMERALHALRQHQMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGATKTWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRADLRLALAAIRSGASSVQRAAATYGIPSGTLYGRCKREGIELSRSNPTPWSEDSMGEALEAVRLGHMSINQAAIHFNLPYSSLYGRFKRCKYQMQNITDNQQSTPDHQKPVQESQQMSVHQCHSQVPAPHTHMYTHAHSYAHDAHTHAQYTHYYHSFQGHGTHGIATS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -