Basic Information

Gene Symbol
kn
Assembly
GCA_905147225.1
Location
LR990105.1:20436202-20451960[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5e-142 4.4e-138 462.1 0.0 182 387 24 247 11 250 0.98
2 2 2.4e-08 0.00021 20.7 1.1 420 468 256 306 248 347 0.86

Sequence Information

Coding Sequence
ATGGGTGCTATCTTTATAAATGTGCTCAAAGAATACCCGATGCAAATAAACATAGTCTATGCCAACTCTTGGTTTTTCTTGAAGTTTTTCCTCAAATGCAACCAAAATTGTTTGAAAAATGCCGGCAACCCTCGAGACATGAGAAGGTTTCAgGTGGTGATATCAACCCAAGTGATGGTGGACGGTCCACTTTTAGCGATATCTGACAACATGTTCGTCCATAACAACAGCAAACATGGCAGAAGAGCGAAGAGATTAGACCCTAGCGAAGGTATTGAGGTCAACACAGACAATACTTCAGGTCTGTATCCCCCGTTGCCAGTGGCAACGCCGTGTATCAAAGCGATATCGCCCAGCGAAGGTTGGACATCCGGCGGGTCAACTGTCATTATAGTTGGAGACAATTTCTTCGATGGCCTTCAAGTTGTATTTGGTACTATGCTCGTCTGGAGCGAGcttaTAACATCTCACGCTATAAGAGTTCAAACTCCTCCCAGACATATTCCAGGTGTTGTTGAAGTGACACTCTCCTATAAGAGCAAACAGTTTTGTAAAGGTGCACCTGGCAGATTTGTTTATGTTTCAGCGTTGAACGAGCCGACGATAGATTACGGCTTCCAAAGACTACAGAAACTCATACCGAGACATCCAGGGGACCCGGAAAAATTGCCCAAGGAAATAATACTAAAACGTGCAGCGGACTTGGCGGAGGCTCTCTATTCAATGCCACGGAATAATCAACTTGGTTTAGGTGCTCCTCGCTCACCGCCGGCAAGTATGCCCTTCAACTCGTACACTGGACAGCTGGCAGTGAGCGTGCAAGACACTGCAGCATCACAATGGACTGAAGAGGATTTCGCGCGTAGTGGTGGTTCGGTGTCGCCCCGGTACTGCAGCGCGGCGTCCACACCGCATGCTGCTCCACCTGCATACCCTCATCCTCAACATTACCCCGCGCCACCCACATCACTCTTCAATACCAGCTCACTGTCTCTGGGACCCTACCATCCGGCGAACATGAATGGACACTTGCCATCTGACCGACACTATAACGCGTATAACACGAAAGATAGCGGGCATTACAGTGAAAGAAATACCACTAAAGGCATGGCCGACTGTCCTGTAAACATTCATACAAAATGCGCCGGCGATATGAAAGGCTTACAGACTAAAGACGCTAAGCTGAGAAGCGCCTTTGCCGTTGTGAGGCAAAGAATGGGTGGTTTGGTCTCATCGCCTTTCAGCGTGAATCCATTCTCGCTGCCCACGTGTAGCGCTCAACAATACGCCCAGACAGCACCACTTGCATCAAAGTAg
Protein Sequence
MGAIFINVLKEYPMQINIVYANSWFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGIEVNTDNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEDFARSGGSVSPRYCSAASTPHAAPPAYPHPQHYPAPPTSLFNTSSLSLGPYHPANMNGHLPSDRHYNAYNTKDSGHYSERNTTKGMADCPVNIHTKCAGDMKGLQTKDAKLRSAFAVVRQRMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00277115;
90% Identity
iTF_00176893;
80% Identity
-