Basic Information

Gene Symbol
rbr-2
Assembly
GCA_905147225.1
Location
LR990107.1:24407152-24432116[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.8e-19 1.2e-15 58.6 0.0 7 89 744 823 739 823 0.91

Sequence Information

Coding Sequence
ATGGCTGATAAATGTGCACAAGAAGTTATCAATgctgttgttgttaaaaataaaatggatgTTCCTATGACAGATTATCTGCAATATATCGATAAAAGGATTAATCAGTTATGGTTAGAAATGTGGAAAAAAGATCAAGATACAAAGGGAAAGTGGTATGGAAGTATCCAAGAGAACTTACCGACTAAACCTTGTGTAACTAGAAGAGTGACTGCTCAGCGCAAGTTTGCCCAAGGCGCTTTCGTGCCATCTTTTGCTACTGCAGCTCCACCAGCAGCTGTAGTTGTTAGTAATGGCTCAGTTGAAAGAACATCAAGTAATCAAGACAAATATACAGTACATATCAGTAATATGTCTACAGAGGTTATGCTTGATGTGGCTTGCTTCGAAAACTCTCATACACATCAACCTATAGTTATTTTGGAAAGAATGCCAGATCCTGAAGACTTACCCTTAAATATAACGCTACATAATCACACACCAACAACAACGATACAACAAGCAACAGAGGCGGAATGTTCTGTTCAATCTAAACAACAAGGTCGCAAAACTGCTGTCAAAAAAAAGGTACATGTGATGAAACTGCGGTCCCGTAAATCCAAAAGAATTTCAAAGTCAAAAACAAGGTCAAAACGGCGTGCTCAGCCTGTACGTGTGCAGTCTGCAGCCACCCAGCCTGCATTGCCAGGGCAGACCAAACGTAAAAGTGTCGGTTATGTATATGAATTTACGTTGGACGATAATAGGCCTTTGAAATACTTAGCGACAACTAGTACCTCTGATGATAACACACTGACTTTACAATCGCAATCCGCCACTAGGGCACCAACTATTCAGCAAAAAGAAGGGGTAAACGTACCCCGGGGAAGAGCACCGGTAGACCCATCTCCAGGTTCATCAAGAGAACCAGATAAAAGTATTACTGAAAAAAGAGCACAGTCAGAATCTGATTCATCAATTTCCCTACATTATGGTGATCGAGAAACATCCCCTCTGCTAAATAGGGTAGTGTCCACCGCTGCAGATGCGAAGTCCTCTAAGGCAGGAAAACAAAAGTCAGTAGCAGAAAACCAGCAAACAGCAGATACTCCGAGACCTCCTGTCACAAAACTTGCCAACGATATTAGAGGCGTCCACAATTTGCGTTCTGTCACCGAAGAGCCGATAGTTAGCGGCGTGCAAAATAACGTTGCTTGTAAGAATCAGAATTACTACAACGAACAAGTTATCCATCGCTGGATGGACAATTCCTTGACCGACAATGGGAAGACTGTACCCAGTGCTGCGACAGATGGACCTGATGCTGCAGTTCAGAATGTGAACGGTGTATCCGGTCCCGTGAAGCAGTGCTACTCAGTGTCCTGGCACACAGTGGACGACGTTTTGAGCGCATCCAACATAGAGTACAACTCACGATGTAGAACTTGTACTAACTGCGAACTTATACAGAAGTACACTAGCGTGTGCAAGCTGCTGAAGATCAAGTATAACATAGATGATATAGTTGGTAACACATCATCAGAGATAGAGATTCCCGAATGGAATGCACTGCCCGTGCAAAAAGATACCAAAGATCCCAAAGGCAATAGGTCCTCACCTAAGAACAGTAGTAAAACACTGTTTGTGGAATTGATTCCTAGGCACCcaaatataatgataaaattacGTCTGCAGACATCGAATCATTTACGAGGCTTTTATATTTCACTTGTTCCGAGATCGAAATTAAATACAAGCGATGTATTCGTGTTTGCTTCCCACGATGTCATCATTAATACATTGCTAAAGAGTCTGAACGTAGTTTATAAGCATCCGCCTCTTTCCAACACTGTTGCGCGCATCGCACCAGGACGATCTTCTGGATCTAAGGATCTAGGAGTAGATCAAGAGCCAGTGGCTGGACCATCTGGCCTTCAGAATATGCCACACGCTGCACATTCCGGAGAGATTGAAATAATAGAGTTGGAAGACGACGGCACCGACGATGGTGATCAAAGCGGTAAAATATTAGATGCGCCCACATACTACCCGACCCGCGAAGAGTTCCAGGACCCAATGGcgtattttgaaaaaattaaagatcaGCTCGTCAAATATGGCATATGCAAGATAGTTCCGCCGGCCGGGTTTAAGCCTCCGTGTAAGCTCGACGATGATGTCACCTTTGAAGTATCAGATCAGTACATAACAAGAATGTACAACAGATGGGGCTCCGCCACCAGGGAGCTGTGCGCGATAAGGAAGTGTCATGCCGCGAGCCAAGTGAGCGCCACACGTCGACCAATGaTTGACGGTATAGAAGTGAATTTACCGAAACTGTACCACCTAGTACAACGGTATGGTGGCCTGGAGACTGTCATGAACAAGAACAAGTGGTGCAAGATTGGTGAAGAAATGAATCTGGTGAAAGGGCCGGCCACAGCGAGGAAACTGGATCAGATATACGTCACATTCTTGTTGCCGTACGAAACGTTACGGTCAAAGCAGAGGCAGGACGTGCTTTCAATGGTGGAAGTGGCCTGGCAGATGAGACTCGAGAAGATAATGAGCCGCGTCAACAATCCATTATATCGTCAGCAGGCCATTCTTGACGGCTCCGTGTACAGAGCTGATGATATCGATGACGACATCACTAAACAAACGGAGGACTGTGTTATTCCCGGCGTATCCATGAACTTGGCTAAATTTAAAAAGATATCTCTGAGTGCTTTGAGCCAGTTTCTGGGTACCAAAGCGCCCAGTACTACTTTGGTCGAAGACGAATATTGGAATATTGTGATATTGGCAAGCGAACACGTCTGTGTGAACACAGCCTCCATCGACACCAGTGAACAAGGGATTGGTTTTCCGACTAACTCTGATGACCCTTATTCTAACCACAAATGGAACTTAAAGGGAAAATTTGGGGAGTCGCCCATGGAGGACAATAAACTACCAAAGACGAAAAAGAAAAGGTTATGTCATACAACAGAACCTGATGATTTGGATTTAGATGCTATACGCAATCATATTTATCGTTACTACTACGAGGTGAACTACCGACCTGCCAGAAGTTATTATCTTCATTAA
Protein Sequence
MADKCAQEVINAVVVKNKMDVPMTDYLQYIDKRINQLWLEMWKKDQDTKGKWYGSIQENLPTKPCVTRRVTAQRKFAQGAFVPSFATAAPPAAVVVSNGSVERTSSNQDKYTVHISNMSTEVMLDVACFENSHTHQPIVILERMPDPEDLPLNITLHNHTPTTTIQQATEAECSVQSKQQGRKTAVKKKVHVMKLRSRKSKRISKSKTRSKRRAQPVRVQSAATQPALPGQTKRKSVGYVYEFTLDDNRPLKYLATTSTSDDNTLTLQSQSATRAPTIQQKEGVNVPRGRAPVDPSPGSSREPDKSITEKRAQSESDSSISLHYGDRETSPLLNRVVSTAADAKSSKAGKQKSVAENQQTADTPRPPVTKLANDIRGVHNLRSVTEEPIVSGVQNNVACKNQNYYNEQVIHRWMDNSLTDNGKTVPSAATDGPDAAVQNVNGVSGPVKQCYSVSWHTVDDVLSASNIEYNSRCRTCTNCELIQKYTSVCKLLKIKYNIDDIVGNTSSEIEIPEWNALPVQKDTKDPKGNRSSPKNSSKTLFVELIPRHPNIMIKLRLQTSNHLRGFYISLVPRSKLNTSDVFVFASHDVIINTLLKSLNVVYKHPPLSNTVARIAPGRSSGSKDLGVDQEPVAGPSGLQNMPHAAHSGEIEIIELEDDGTDDGDQSGKILDAPTYYPTREEFQDPMAYFEKIKDQLVKYGICKIVPPAGFKPPCKLDDDVTFEVSDQYITRMYNRWGSATRELCAIRKCHAASQVSATRRPMIDGIEVNLPKLYHLVQRYGGLETVMNKNKWCKIGEEMNLVKGPATARKLDQIYVTFLLPYETLRSKQRQDVLSMVEVAWQMRLEKIMSRVNNPLYRQQAILDGSVYRADDIDDDITKQTEDCVIPGVSMNLAKFKKISLSALSQFLGTKAPSTTLVEDEYWNIVILASEHVCVNTASIDTSEQGIGFPTNSDDPYSNHKWNLKGKFGESPMEDNKLPKTKKKRLCHTTEPDDLDLDAIRNHIYRYYYEVNYRPARSYYLH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-