Basic Information

Gene Symbol
Xbp1
Assembly
GCA_905147225.1
Location
LR990116.1:18114451-18115910[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.8 9.6e+03 -2.4 0.1 16 25 32 41 30 42 0.73
2 3 8e-18 1.1e-14 55.1 10.0 2 62 46 106 46 109 0.94
3 3 6.5e-06 0.009 16.9 1.7 27 55 85 113 83 118 0.91

Sequence Information

Coding Sequence
ATGAGTGCTCCGATAATCATCACTGTGCCGAATAACTACTTGGCTATGGACGAGGTGGAGATTGATACCAAGCCGATTGTTGATGTGGCTTCTCCAGCTCCATCAAGAAAACGGCGGCTGGATCATCTAACATGGGAGGAAAAAATGCAAAGAAAGAAGTTGAAGAACCGAGTGGCAGCTCAGACCTCACGCGACAGGAAAAAAGCTAAAATGGATGAGATGGAATCTAAGATTCAGCATTTTATTGATTTGAATGAGCGTCTAACCAGTGAAGTTGAGAGTTTGAAAGCTTTGAACGAGCGTTTGTTGAGTGAAAACGCAACGCTACGTAGCGAGGCAGCGGCGCGGACCGTCGCGGGAGCCCCCAGACCAGCAGAGTCTGATCCTCAGCAGAAGGAAGGGCCCCCGACGGCGATCCGCGCGGCTCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCTCAATTCGACTCTGAAGAGTACATCACTACCCTCAATCAACTTGCAGACTCCCTCCTCAAAGAAATTGATGCAAGTACTGCAGGAGCGGCTCAAAATGAGCCAATCAGGGACACTGGAGAGTGCACTGAAAGAACTGAAGTGGTGGGGACCTCAGCAGAGCACATGGAATCCAATGAAGGTTCAGTGA
Protein Sequence
MSAPIIITVPNNYLAMDEVEIDTKPIVDVASPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESKIQHFIDLNERLTSEVESLKALNERLLSENATLRSEAAARTVAGAPRPAESDPQQKEGPPTAIRAARLLLAMCLLSQTSSLNSTLKSTSLPSINLQTPSSKKLMQVLQERLKMSQSGTLESALKELKWWGPQQSTWNPMKVQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00869363;
80% Identity
-