Ever002674.1
Basic Information
- Insect
- Eupristina verticillata
- Gene Symbol
- -
- Assembly
- None
- Location
- GWHALOE00000574:2064075-2095620[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.016 1.2 9.2 1.0 1 23 362 384 362 384 0.97 2 17 0.068 4.9 7.3 1.3 2 23 429 450 429 450 0.94 3 17 4.6 3.4e+02 1.5 0.6 2 21 512 531 511 532 0.91 4 17 0.00032 0.023 14.6 4.9 1 23 585 607 585 607 0.98 5 17 4.3e-05 0.0031 17.3 1.1 1 22 641 662 641 665 0.91 6 17 0.0003 0.022 14.7 1.2 1 23 744 766 744 766 0.97 7 17 0.00033 0.024 14.6 4.1 1 23 811 833 811 833 0.96 8 17 7.8e-05 0.0057 16.5 0.9 1 20 838 857 838 859 0.95 9 17 0.14 10 6.2 0.7 2 23 870 891 870 891 0.97 10 17 2.8e-05 0.002 17.9 1.7 2 23 929 950 928 950 0.97 11 17 1.9e-05 0.0013 18.5 1.6 1 23 955 977 955 977 0.95 12 17 0.00044 0.032 14.2 1.1 1 23 983 1005 983 1005 0.99 13 17 3.3e-06 0.00024 20.8 0.4 1 23 1021 1043 1021 1043 0.95 14 17 2.7e-07 1.9e-05 24.3 0.6 1 23 1049 1071 1049 1071 0.99 15 17 1.3e-05 0.00093 19.0 0.2 1 23 1077 1099 1077 1099 0.98 16 17 0.00011 0.0078 16.1 4.1 1 23 1105 1127 1105 1127 0.96 17 17 0.0076 0.55 10.3 0.4 1 20 1133 1152 1133 1154 0.89
Sequence Information
- Coding Sequence
- ATGGATACTGTACAAATAAATACGTCGGAGAATTTGCAGCCGTTACCGTTAAAAGAGGACAACATCGACATGACATCAATACACCAAGTAGAAATATGTCGTATCTGCCTTGTTGGTAATTCCATGATGCGAGGCCTGTTTCACATGAACGATATTTTATCCCTGTCTAATAAAGCAATGAGTCTTGCATGTGTTAAGATGTCACCTGGAGATGGATTACCTTCTTATATCTGCTGTGATTGCAGTGATAAACTTGAATTAGCATATAAATTTAAATTACAAGTAGAACATGCAGATAATATATTACGTCAAAAATTAGACTCGTTAAAAATAAAGAATGAAATTTTGTTTGATAATATAAATATTGATGAATCTACCCATATACAACATATTAATGATGTAACAGAGAGGAATTTACTTTTAAAAAATCACATGTATTTATCAAATGTTCAAAAAATATATAAGAAAAAAAATATTTTGCAAAATGGTGGTACCCAGAAACATGAAATTAATGATGATATTAATAAACATGAAATAAGTAAGCAAAAAAATAAAAGTAATTTCCAAAACTCAAATAAAAATAAAGATCAAATTAAAATTACAAAAAATCAGAATTTATCACAGATTAATAGTGATGAACAAATTCATAATCAAGAAAATCAACAAATACAGGAGATATCAAATGAACAAAATAATCATTCTTTTCGAACACATATTTTACAAGCAATAATGCTACATGAAATTAATAATGAAGAAAAAGTACAAGAATTAAATCAGACTCATCCATTAGCAATATGTGAGCACAATTATGTTGCAGAATTACATTCATGTAATATGACAAATGAAAATAATGCTTTGAATTCAGAGGAATTAGATGGAGATAATAAAATAAACATGGAAAATTATGATGTATATAATATACCAGAAAAATCTTTGATGATTGAAGTCACTAGTAAAAATAAACATAAAATTAATCAAAAAAAAATTTTGTTTAATGAACATGTTCATGAACATATTGATTTTGAAAATCCTAATTTGAGTTTTAGATTGAAGGCTCAGTCGGAAAAATTAGAAAAGACCTTTTTTATATGTTATTTATGTGATAGTCAATTTTTGTCAAAAGACACATTAAAAGAGCATATGAATTCTCACGAAGAAGTAATAAAAACTCTTTCTTTGATGAAAAATGAAGTAGAGGAATTAGAAAAAACATTCGAGAAGTCTGAAAGTGATCCTACAAATTTATTTCCATTGAAATCACTTTCAAGTGGAAAGCATCCAAATACTTGCCCTCATTGTGGAAAAGAGTATCTTTATATAATATCATACAATAAACATTTGAAACAACATGAAAACAGTAAAGATAAGGATGAGGTTATGCCTTTAGAAGTCTCTTTTCAAGAAGATTATAACATATTAAATTTTCATGGATGTAATGATGATACTTCAATTAATTCAACAAGCAATGAAAATGAGAAAAATGATAAAAATAAATTAGAAGTAGAAAAAGAATTTAATATAAATAATCCAATAAAGTGCAATACTTGTATAAATGAATTTGATACAATAAAAAAATTAAAGAATCATCAATCAAAGAACATTATTGAAAGTGTATGTATTGATCAAGATTTAAAAAATGAAATTGAACAATCCAATATTGAAGGTAAAACCGTTAATAGCGAGGAAAATAATATAAATATTAATACACATAAGTTAAATGAGTGTCTGATGAAAAAAGATAATTCAAGAAATTTTAAATGCCCTCATTGTTCGTTAAGCTATGCTCATAAAAAATCTTTTGCTAAACATATAAGTAGTCATTCCGATAACAACTATACTTCTAAACTTGATAATCAGAATTTTAAAGGAAAAGATCAGTTTTTTCATTATACAGAGGAACATAGTGACCTATTGAAAAATTTCAGATGCACACAATGTAATAAAACTTTCAGTAATGAACTTACTTTAAGAACCCATATAATAGTCACGAACCATAAGACAACATTATATGGACAAGAATATGATTTAGACAAAAGAGTAAAAAGAGTAGCCGCTAGAGCAGCTCAAAGGATTATTGATCAAATTAGAACAGACCTGAATGTTGATGAATCCGAGGAGGATGAACAAGAGAAGCAAAGAGATAAGGATTTTGATGAAATAAAAGCAGAAATTTCTGAACAAAAAAAAAAATATATGGTACTGAGGAAATTGCAACGTAATTCAATGAAATTTTACTGCGCAACCTGCAATCAAAGATATGCATCAAAATTTGCACTTAATAAACATATGGAGCAACATGTAAAGGATGATAGTTCAAGAAAGCAAGAAAAAAAAAAAAATTGTATTAAATATCAAGAAAATCAAGAAAATGAAGATAATGACGTAGAAGATGATGATTTCGAAAGTGGTCTTGAATGGCCTACTGACAGTCATGAATGCGTCACTTGCAAAAAACGTTACAGTACAAAAAAATCTCTTTTGCGTCATCAATTATTACATGAGGAACCAAATTTTCAATGTGATATTTGTAATATTAAGTTTTATAGAAAAGATAAATTGAAAGCTCATTACGATAAATGCTCTGAAAAAAATCCTGATCAAGTACGCAAGTGTAATATTTGTGGTGACAATTTTGAAAACAATGAAATTCTAAAAGATCACAGAACAAAGCATGTAACAGAAGGAATATTAACGGAAGAGGATCTTTTAGAAATACAGCCAAGGCCAGAGGATAAAACTGAAGGAAAGGTTATACGCAAAAGGCGAACAGATATTGTAGGTCTTGAGTGCACTGAATGCAATAAACATTATACTTCTAGAAAAGGATTATTAAGACATATCCAGGTACATGAAGGAAAGAAGTACTTGTGTGATATCTGTCCAAAGAAATTTTACAGACGAGAACATTTAAAAATTCATGTAGCAAAACATAATATGATAAAGCCATACAAATGCCCTCGGTGTATAAAGCGTTTTATTAAAGAAGAGCAATTAAATAATCATCTCATGAAACATGATAGAAGTTTTAAAAAAATGAAAGAAACTGATACCTCTAAAAGATTTTTATGCGAGATATGCTCCAAAAGCTTCACACAGTCCACAACCCTTATAGCACATTTACGAGCCCATAACGGTATTAAACCCTATGTTTGTGAAGTATGTTCAAGGCCGTTCACAACAAATGCTTATTTAAAAATGCATATGAGAACACATACTCAAGAAAGACCTTATATTTGTCAATACTGTTCTAGAGCATTTGCTAGAGCCGATACTTTAGCAAACCACTTAACTACGCACACTGGAGAAGCTAAATATCACTGTAAATATTGCCCAAAAAACTTTAGAAGACTTAAATCTCTTAAAGAACACGTTTTTATCCATACCGGACAAAGACCATACGCATGCCCTACTTGTGATAGAAGATTTAACAATAATGGCAGTAGATATGCCCATAGCAAAAGATGTAAGCAAACTTCGCTCCAAACGAGAAATTCTTTATTTAATCATCCGATACCTAATACTGAATACGAATGTGAGGAAGAACAAGAGCAGCGAGGACTACAAAATCAACTACAATCTGAAAAGTTAAATGATACTATCATAGATCAAACTCAGATTATGAAATCACAAAATATAAAAACTATTACAATTACAAGACCCGGTAATGGTGTTAATGAATCACACATTATGGCACATCAGGAAATTTTAATGCCTTTAATATTACCTCTTACGGTCACTTTGACTGATGTTGGTGAGGAAGTTATTTTACCCGAGGGAACAAAAATTTTCACATCGTAA
- Protein Sequence
- MDTVQINTSENLQPLPLKEDNIDMTSIHQVEICRICLVGNSMMRGLFHMNDILSLSNKAMSLACVKMSPGDGLPSYICCDCSDKLELAYKFKLQVEHADNILRQKLDSLKIKNEILFDNINIDESTHIQHINDVTERNLLLKNHMYLSNVQKIYKKKNILQNGGTQKHEINDDINKHEISKQKNKSNFQNSNKNKDQIKITKNQNLSQINSDEQIHNQENQQIQEISNEQNNHSFRTHILQAIMLHEINNEEKVQELNQTHPLAICEHNYVAELHSCNMTNENNALNSEELDGDNKINMENYDVYNIPEKSLMIEVTSKNKHKINQKKILFNEHVHEHIDFENPNLSFRLKAQSEKLEKTFFICYLCDSQFLSKDTLKEHMNSHEEVIKTLSLMKNEVEELEKTFEKSESDPTNLFPLKSLSSGKHPNTCPHCGKEYLYIISYNKHLKQHENSKDKDEVMPLEVSFQEDYNILNFHGCNDDTSINSTSNENEKNDKNKLEVEKEFNINNPIKCNTCINEFDTIKKLKNHQSKNIIESVCIDQDLKNEIEQSNIEGKTVNSEENNININTHKLNECLMKKDNSRNFKCPHCSLSYAHKKSFAKHISSHSDNNYTSKLDNQNFKGKDQFFHYTEEHSDLLKNFRCTQCNKTFSNELTLRTHIIVTNHKTTLYGQEYDLDKRVKRVAARAAQRIIDQIRTDLNVDESEEDEQEKQRDKDFDEIKAEISEQKKKYMVLRKLQRNSMKFYCATCNQRYASKFALNKHMEQHVKDDSSRKQEKKKNCIKYQENQENEDNDVEDDDFESGLEWPTDSHECVTCKKRYSTKKSLLRHQLLHEEPNFQCDICNIKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDNFENNEILKDHRTKHVTEGILTEEDLLEIQPRPEDKTEGKVIRKRRTDIVGLECTECNKHYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCPRCIKRFIKEEQLNNHLMKHDRSFKKMKETDTSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTTHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQTSLQTRNSLFNHPIPNTEYECEEEQEQRGLQNQLQSEKLNDTIIDQTQIMKSQNIKTITITRPGNGVNESHIMAHQEILMPLILPLTVTLTDVGEEVILPEGTKIFTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -