Ever008348.1
Basic Information
- Insect
- Eupristina verticillata
- Gene Symbol
- -
- Assembly
- None
- Location
- GWHALOE00000405:5014519-5028338[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 8.8e-05 0.0064 16.4 2.7 1 23 10 32 10 32 0.97 2 27 2.3e-05 0.0017 18.2 2.2 1 23 41 63 41 63 0.98 3 27 6.9e-06 0.0005 19.8 1.0 1 23 69 91 69 91 0.97 4 27 3.6e-05 0.0026 17.6 1.9 3 23 99 119 97 119 0.97 5 27 1.6e-06 0.00012 21.8 2.4 1 23 125 147 125 147 0.98 6 27 3.7 2.7e+02 1.8 0.3 1 8 153 160 153 162 0.91 7 27 0.00084 0.061 13.3 0.3 1 23 265 288 265 288 0.94 8 27 3.4e-06 0.00025 20.8 2.2 1 23 294 316 294 316 0.97 9 27 1.3e-05 0.00097 18.9 6.8 1 23 336 358 336 358 0.97 10 27 0.0012 0.09 12.7 5.9 2 23 364 385 363 385 0.97 11 27 0.0019 0.13 12.2 0.1 1 23 390 412 390 412 0.98 12 27 3.4e-06 0.00025 20.8 0.9 1 23 420 442 420 442 0.98 13 27 7 5e+02 0.9 2.0 1 23 448 471 448 471 0.93 14 27 0.00024 0.017 15.0 0.3 3 23 484 504 482 504 0.96 15 27 1.4e-06 9.8e-05 22.1 1.8 1 23 510 532 510 532 0.96 16 27 3.5e-08 2.6e-06 27.0 0.2 1 23 538 560 538 560 0.98 17 27 2.8e-07 2e-05 24.2 0.9 1 23 566 588 566 588 0.98 18 27 0.059 4.2 7.5 0.2 1 14 594 607 594 608 0.91 19 27 3.6 2.6e+02 1.8 0.1 1 8 852 859 852 870 0.79 20 27 6.3e-06 0.00045 20.0 6.1 1 23 881 903 881 903 0.98 21 27 0.017 1.3 9.1 3.6 1 23 912 935 912 935 0.95 22 27 1.1e-05 0.00081 19.2 2.3 1 23 941 963 941 963 0.99 23 27 0.00063 0.045 13.7 2.0 1 23 968 990 968 990 0.97 24 27 0.0012 0.084 12.8 0.7 1 23 996 1018 996 1018 0.98 25 27 3.2e-07 2.4e-05 24.0 0.4 1 23 1022 1044 1022 1044 0.98 26 27 0.00011 0.0082 16.0 0.0 1 23 1050 1072 1050 1072 0.95 27 27 0.00099 0.071 13.0 0.6 1 23 1078 1101 1078 1101 0.97
Sequence Information
- Coding Sequence
- ATGAACAGCAAACACGAAGCCAAAGAGCATGTGTGTCATGTTTGCGACAAATCCTTGCCAAACAGCCACTCACTGGCTCGACACGCAATGATGCACGACCCCAACTTCGAGCCTATAAAGCACCAATGCGAATTCTGTGGCAAAACTTTTGCTTACAGAAATTCACTCGTTTCTCATGTTAAATCGCACACGGGGGAAAACAAATTCGATTGCCACCTTTGTGGAAAATCGGTCTCGTCGAGAGGATCGTTGCAAGATCACTTAAGGTTGCACGGTGGCGAGAAGAATCTTGCATGTGATATATGCGGAAAAACCTTTCACAAGAGGACGACTCTCGTTGTTCACAAAAGAACTCACACTGGTGAAAAGCCATATACATGTGAAACCTGTGGCAAAGCTTTCACTCAGCACTCAACTTTGGTGATTCACAGACGGTATCATACTGGCCAGAGACCTTATCAGTGCAGTATATGCGAGAAATTCGCCTACCCCGAGCGCTATTATCCACTGACGATACTGGACCACGACATCGATGTCAAAATTCCTGCCATGGCAAACAGCATAGTTGACAGTTCGGCAAGTCCCGTACCCATCATCACGAAGAAAAAGCAACAAATGAAGAAGCTCGAAGCTGAACCCGAACCGGTTATAGTGAAAATTGAAGATGACGAGGATCAAGTGATGCTTAATGATGAGCAGGTGATGCTTAACGATGAGCAAACGATGCTTGATGAAGAGAAAACTATGCTCGATGATGAGCAGATGATGCTTGACGATGACCTTCCACTTGCGTATTATTGTAAATCCTGTGGAGTATTTTTTTCCTCCCAAGAACTCCTAGACACACACCTGTTAGCACTGCACAAAGTAAAGAAAAGGTACGACTGTGCCCACTGTGGCAAGAGCTACCGAACAGCTCAGAGCCTTCGTCAACACATAAAGTACCATAAGGTTACTAAAAAGTCTGACAAGGAAAAGAATCAGCATCAGCAAGAGGAAACGGAATTCACGTGCAAGACCTGCAATAGGTCATTTCGTCATAAGAGTAATTATCAGAAGCATCTGGTAAGACACACAGTCGGTGACCTTACATGCAAGCACTGCTCCAAGAAATTTCGTCTTTTCCGAGATCTCACGCGCCACGAAAAGACTCATTTTCTGCCGTCTTACATGTGCAAGGAATGTGACTACGAGACTACCGTGTTGGCAGCCTTGAGCATTCACATGACAAGGCACACCGATAAAGCCGATCTCCCCTTCAAGTGCAATGATTGCGAGAAGCGTTTCCGGAAGGCAGTCGAGCTCCAGGAACACTACAACATTCACTCCGGTGAAAAGCCTTTCTCTTGCCAGGCTTGTCCAAGTGCGTTCTTCCTGAGGAGGCAACTCTCGGCGCACTGCCGACGTCTCCACCCCGAACTGAAAGCTCAAAAAGTGACGAGCACCGCCTGTGATATATGTGGCAGAGTTTTGGCCACTAAGCGTTCGCTTTTTAGGCACAAAGAGAGCCACAATCCAGTTAAATTATATTTATGCGACTACTGTGGCAAGAGTCTGAGTAGTGCCGAGCATCTCAAGAAGCACCGGAGGATACACACCGGCGAGAAGCCCTACGTGTGCGACATTTGTGGAAAGGGATTCACAGACTCCGAGAATCTCAGGATGCACAGGAGAGTTCACACCGGGGAGAAACCGTACAAGTGTGATCAGTGTCCCAAAGCCTTCAGCCAGAGGTCGACTCTGACGATTCATAGGAGAGGTCACACCGGGGAGAGACCCTACGTTTGTCAAATTTGCCAGAGAGGATTCTCGACACAGACATTATGTTTACAAGGCTCTAACAACCAACTCATATTCATTAGAGTAAAAAATGAATTTGATAAGCAAGTGCAGCAGCAAACAATACCATCTCTAACACAATCTGAAGAACAACAACCAATTGTATTGATAGAACAACCATTGTTTATATTACAAGAGGTGCAAAAAGAAGAAAAATTAGAACCCCTTTTGATGTTGGAACGTAAAATAATAAATAAAAAAAAATCGAAAGTACAAAATCAGCGAAAATTAATATTGAAATCGTCAAGCCAGCTGCAGCAAAATTGCAATAATCAAATAATTAGTTTAGATACGGAAGACCCTCTCGGTATTTCTGTACCTATCTTAAAGGCAATAGAGCCACAAAAAAAAATTGGAAATTATAAATTAGGATGTACGAATTCTAAATTAAATGCATCAAAAATATTACAATGTCAAAAAAGGATAAAATTAAAAATTCCTGCTGAACAGCTTCAAGTAAAAAAAGAACCTTTTAAAATAGAAAATTTTTTATTACGTCAAGATAACATCTCAACAGATCTAGAATCATCATCAATAATGGAAGATTTATCTCCAATAGAAAAGTTCCCTTCTACTTCTCAAGAGATTTTTCCTGATATTTATAATCCATTTAATTCCGAAAACGACGAAAGCGAACCTCTCGAAGACTTTAATTTCAAAGATGATGAAAACGAAGAAATGAAAGATATCTACACTAGAATCGATTATGGTGGTTACCAGTGCAATATTTGCCAATTAACAAGACTTGACCGATGGAGCATGTTATTTCATATATCTGGTCAGCACAGTCATTTGCGTCCCTTTAAATGTAACTCATGTGATAAAACCTTCAAAAGAAAACATTCATTAAAACTGCACCAATTGTCTCACAACCTCAAAAATGCGGTTGTAAATTATTGTTGTGAAAAGTGCGATTATCGGACACCAAATAAAGTATCGTTACGTTATCACTATTATCGGGTACATACAAATGAGTATCGATTCACATGTGAACACTGCGAAAAGCGTTTTAAGGTCAAGCGAGAGTTGGCGGATCACCTGATGACCCACAGTGGCGTTCAGCATATGTGCGACATTTGTGGAAAATTGTACAGAGGCGAACATTTACTCAGAGCTCATCGTAGATTGCATTTAGACCTTTATAAATACCAGTGCGTAATGTGCAAAAAAAAATTGGCCACAGAATTCGGTTTGAGCAATCATATGAAATTACACAGTAGGACCTACGAATGCGATGAATGCGGTATGAAGTTCCCTAGCAAGTATAATCTTATTAAGCACAGAAATGTTCATACAAGAGAACAAGCTTTTCCTTGTCCCGAGTGCGGAAAGGTTTTTGCTGATCAACCAACGCAAAAAGTCCATTCACTCATTCATGCTGGTATAAAACCCTACAGGTGTAACGTTTGCGGATTAGGATTTACTCAAAGGACCCCAATGATGCTGCATTGGAAAAAGAAACATCCGGGGGAGACCGATCCTCCTCCGCCAGTAATTTTAAAGAATATATTAAAAAGTATTGAAGAGCAAAATAAAAAAAAATCAGCAAAAAAATAA
- Protein Sequence
- MNSKHEAKEHVCHVCDKSLPNSHSLARHAMMHDPNFEPIKHQCEFCGKTFAYRNSLVSHVKSHTGENKFDCHLCGKSVSSRGSLQDHLRLHGGEKNLACDICGKTFHKRTTLVVHKRTHTGEKPYTCETCGKAFTQHSTLVIHRRYHTGQRPYQCSICEKFAYPERYYPLTILDHDIDVKIPAMANSIVDSSASPVPIITKKKQQMKKLEAEPEPVIVKIEDDEDQVMLNDEQVMLNDEQTMLDEEKTMLDDEQMMLDDDLPLAYYCKSCGVFFSSQELLDTHLLALHKVKKRYDCAHCGKSYRTAQSLRQHIKYHKVTKKSDKEKNQHQQEETEFTCKTCNRSFRHKSNYQKHLVRHTVGDLTCKHCSKKFRLFRDLTRHEKTHFLPSYMCKECDYETTVLAALSIHMTRHTDKADLPFKCNDCEKRFRKAVELQEHYNIHSGEKPFSCQACPSAFFLRRQLSAHCRRLHPELKAQKVTSTACDICGRVLATKRSLFRHKESHNPVKLYLCDYCGKSLSSAEHLKKHRRIHTGEKPYVCDICGKGFTDSENLRMHRRVHTGEKPYKCDQCPKAFSQRSTLTIHRRGHTGERPYVCQICQRGFSTQTLCLQGSNNQLIFIRVKNEFDKQVQQQTIPSLTQSEEQQPIVLIEQPLFILQEVQKEEKLEPLLMLERKIINKKKSKVQNQRKLILKSSSQLQQNCNNQIISLDTEDPLGISVPILKAIEPQKKIGNYKLGCTNSKLNASKILQCQKRIKLKIPAEQLQVKKEPFKIENFLLRQDNISTDLESSSIMEDLSPIEKFPSTSQEIFPDIYNPFNSENDESEPLEDFNFKDDENEEMKDIYTRIDYGGYQCNICQLTRLDRWSMLFHISGQHSHLRPFKCNSCDKTFKRKHSLKLHQLSHNLKNAVVNYCCEKCDYRTPNKVSLRYHYYRVHTNEYRFTCEHCEKRFKVKRELADHLMTHSGVQHMCDICGKLYRGEHLLRAHRRLHLDLYKYQCVMCKKKLATEFGLSNHMKLHSRTYECDECGMKFPSKYNLIKHRNVHTREQAFPCPECGKVFADQPTQKVHSLIHAGIKPYRCNVCGLGFTQRTPMMLHWKKKHPGETDPPPPVILKNILKSIEEQNKKKSAKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -