Basic Information

Gene Symbol
ncor1
Assembly
None
Location
GWHALOE00000006:1970294-1976643[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2 1.5e+03 -1.1 0.1 31 39 151 160 147 161 0.80
2 2 1e-08 7e-06 25.5 0.0 3 43 308 348 307 351 0.96

Sequence Information

Coding Sequence
ATGAAGCAGAAGCATGTACAACAGTTACAGCAACCACTCAGGATAGATACGAGGCCAACAGCGGGTGTTTATACGCCTCAAACGGAAGCCATTTCGCCAACCCTTCCAGAACCTAATACACAAGAGGATGCGGCATTTAGGAGTACCAAAGACGACCTCCTTCAGCAGATCGCTAAAGTTGATCGGGAAATCGCTAAAAGGGAATCTCAGATTAGTAAGCTTCGAAAAAAGCTTAAGGAGTTGGAAGAAGTTGCTAACAAACCCCTGGAAGCACCCGGTGCTAAGCGGCCCGTTGAGGAAACGTCTCTACAACCTAAACATCAGTCGCTTGTACAAAAAATTTATGCTGAAAACAGGAAAAAAGCGGAGGAGGCGCATAGGCTACTGGAGAAACTAGGGCCAAAGGTTAAACTGCCGCTTTACAATCAACCTTCGGACACGAGTGTATATCAGGAAAATCGCACGAGGCATCAATGTATGAAGGCCCGCCTCGTAGCCAGACTTCGCAAGGAACATGCGGAGCGTGCTTCCCTGCATCGTCAACAATCACAGACGTACGCGATACTCGTGCAGGAGTGGCACCGCAAGGTGGAAAAACTGGAGGCAACGCAGAAGCGTAAGACAAAGGAGGTCAAGAACCGGGAGTTCTTCGAGAAGGTCTTCCCAGAGTTGCGAAAGCAGCGCGAGGATAAGGAACGTTTTAATAGGGTTGGAGCGCGTATTAAAAGTGAGGCTGATTTGGAAGAAATAATGGATGGTCTGCAGGAGCAGGAGATGGAGGACAAGAAGATGCGTTCGTATGCTGTGATCCCACCGCTGCTGTTGGACGCGAAACAGCGGAAAATCGCATTTCAGAATCGCAATGGCTTACTGCAACCGGAGGAGCTCGAAGCACTGCACAGCGAGAGAAAACTCATTAATGTCTGGAGCACGACAGAGCACGATATGTTCAAGGAGAAGTATCTCCAGCATCCCAAGAACTTCGGAGCGATAGCTCAATCGTTCGAGCACAAGTCTGTAGCGGACTGTGTGCATCACTACTACCTCACTAAAAAAGCGGAGAATTATAAGCAGCTACTGCGGAAGTCGAGGCGAACGCGTAGTTCTCGAAACAATCCTAACAATAAGGTAAATAATAGTAACTCTACTATCGGACCTATAGATATATTAACGACAGGAGTAACGACGAGGCTGCAGCGTGAGCAGCAACAGAAAACTCAAGAGAATCCGCAGAGTAGCTCGGCGTCGGCAAGTAGTAGTAGTAATGCGACGACGACAACGTCAACTCCATCGACGACTACCTCTTCGTCATCATCAACGTCAGTTACTAATGCGAGTTCCAACAGCACGACGTCATCTTCGTCTAGTGCCGCCGTTGCTGCAAGTTCGTCGGGTAGTAATATTACCGCAAGCACGAGTTTAACCTCGGAATCTTTGCCGACAACGGTGACAACGACGCCTACGACGGCGACAACGATAACGTCTACGGCGTCGGCAGCAGCAGCGTCAGCATCCGTCCCAAATATCAGTGAGATGACCACGACGTCAAGCGTACTCACGACGACGTCAATGTCGTCGACCAGCGCCAAGGACGCCCGTGAAGCGAATAAGGAGAATAAGGAGATTAAGACAGATTCGAAAGATTCGTTACATCTTAAGGATATTAAGGAGGAGTCGCAGTCAAATACCGACACACTCTCTAGCAGGGAAATCAAGTGA
Protein Sequence
MKQKHVQQLQQPLRIDTRPTAGVYTPQTEAISPTLPEPNTQEDAAFRSTKDDLLQQIAKVDREIAKRESQISKLRKKLKELEEVANKPLEAPGAKRPVEETSLQPKHQSLVQKIYAENRKKAEEAHRLLEKLGPKVKLPLYNQPSDTSVYQENRTRHQCMKARLVARLRKEHAERASLHRQQSQTYAILVQEWHRKVEKLEATQKRKTKEVKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDAKQRKIAFQNRNGLLQPEELEALHSERKLINVWSTTEHDMFKEKYLQHPKNFGAIAQSFEHKSVADCVHHYYLTKKAENYKQLLRKSRRTRSSRNNPNNKVNNSNSTIGPIDILTTGVTTRLQREQQQKTQENPQSSSASASSSSNATTTTSTPSTTTSSSSSTSVTNASSNSTTSSSSSAAVAASSSGSNITASTSLTSESLPTTVTTTPTTATTITSTASAAAASASVPNISEMTTTSSVLTTTSMSSTSAKDAREANKENKEIKTDSKDSLHLKDIKEESQSNTDTLSSREIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-