Ever007533.1
Basic Information
- Insect
- Eupristina verticillata
- Gene Symbol
- bab1
- Assembly
- None
- Location
- GWHALOE00000177:9526673-9532053[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.7e-06 0.0066 15.6 0.1 2 38 210 245 209 251 0.88 2 4 9.6e-14 2.3e-10 39.4 0.0 1 39 259 296 259 300 0.95 3 4 0.0001 0.24 10.6 0.0 7 34 317 343 313 349 0.89 4 4 6.2e-14 1.5e-10 40.1 0.1 2 44 372 414 371 415 0.94
Sequence Information
- Coding Sequence
- ATGTCCGAATCGGCAGCTACAGCAGCGAATGACGAGGCGCAGGTAGACACCTCGTACTGCTTCAAATGGAGCAACTACCAGAGTCACTTGTCGGAGGTGGTGCGCCAGCTACTCGACGAGGAATGTATGGTCGACGTGACGCTGTACGCGGGCGGGGAACGCATCCAAGCTCACCGACTCGTTTTGTGCGCTTGCAGTACACTATTCCAAGAAATCCTGAGCCAGGTTAATGAAGAACATCCAACTATTATCTTGAGTGATATATCCCCTCAGGATGTGAGGTCAATCGTGGAATTCAGTTATAATGGAGAAGTCAGGATTCCTGTTGAAAATATTAACAATTTGCTGGACGCTGCACATTCCTTAAAAATTTGCGGCTTAATGGAGATTGAAGGACTTGATGAATCTGAAATACCATATGACAAAGATGTAAGTTTTGAAGATTCATATCTTCTTAATGAATTAACTAAAGCAGAAGAAGAAGAAGAAGAAATGAAATTATTTGATCGAATAAATAATGAAAAAATAATATGTAAAGAAAAAAAAAGAAGTATCTCTGATGATGACACAGATTCTTTTCTTAAGAAGAGAAGGCGAAGAAAAAGCGTTTGCAAAAAAGAATATAGTGATGAAATGTTAACGGCTGCTATTGCTGACATACGAGCTGGAAGTTCATTACTAGATGCAGCTGCAAGAAATCATATTCCTAGATCTACTCTGTATATGCGTGCAAAAGTATTAGGAATACCTTTAAATCCTTCTAGAAGTGAATATACAAATGAAGATATGAGATCAGCCATAGAGGCAGTGATTGCTGGATCCAGTCTACAACAGGCATCAGATTTATTTGGGATACCAAAAACAGTTTTATGGAGGAGAATTCAGAAAGAGGGTTGTCAAACTCCTAGACACGATACAAGAAAGAATTATGGAGCTGAAAAGAGAGAAGCTGCTGTTAAGGCATTAGCAAGAGGAGAAACACTAACAAAGGTTGCAAACGAATATAAGATTCCAAAAACAACATTATTTCGAGATAAAGCTAGATTAGTAGACGAAGGAAAATTACCTTCGTCATATTGGAGAAAACGTAAAACTGATACTGAAGATCTCAAGCGAACTCGTTTAGAAGAAGCAGTGGCTGCATGTAAAGATGGTAAAATGTCCCAAGCAACGGCATCGGTAACTTATCAAATACCTAAAACAACTATATGGAGGCGTCTCCAAAAGGATATGACTAGAAAAGAGTCATCGATATCTAGAAAGTTAGAAATGAAACATGCAGAAAAGTGTTCAAATATTGTAAAAACAGAAGAATTAAATGAAACTGATTTTGAAGCATATTGCCCTGATGATTCAGACATGAATATAACATATATTGATGAAAGTAATATATCAGATGATCCAGTAATAATCCTTGCAAGTGAAGATGTATCTGATCTTAATTTACCTAACAGATCATTAGTTGTTGTTCATGAAAACAGTGATGAAAATTTTATAGCGTGTGATTTAGAATTGGATGAAAACTCAAGTTTTGTATCAAAAAGTTAA
- Protein Sequence
- MSESAATAANDEAQVDTSYCFKWSNYQSHLSEVVRQLLDEECMVDVTLYAGGERIQAHRLVLCACSTLFQEILSQVNEEHPTIILSDISPQDVRSIVEFSYNGEVRIPVENINNLLDAAHSLKICGLMEIEGLDESEIPYDKDVSFEDSYLLNELTKAEEEEEEMKLFDRINNEKIICKEKKRSISDDDTDSFLKKRRRRKSVCKKEYSDEMLTAAIADIRAGSSLLDAAARNHIPRSTLYMRAKVLGIPLNPSRSEYTNEDMRSAIEAVIAGSSLQQASDLFGIPKTVLWRRIQKEGCQTPRHDTRKNYGAEKREAAVKALARGETLTKVANEYKIPKTTLFRDKARLVDEGKLPSSYWRKRKTDTEDLKRTRLEEAVAACKDGKMSQATASVTYQIPKTTIWRRLQKDMTRKESSISRKLEMKHAEKCSNIVKTEELNETDFEAYCPDDSDMNITYIDESNISDDPVIILASEDVSDLNLPNRSLVVVHENSDENFIACDLELDENSSFVSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00464086;
- 90% Identity
- iTF_00707776;
- 80% Identity
- iTF_00708618;