Basic Information

Gene Symbol
KDM5A
Assembly
None
Location
GWHALOE00000468:670322-684276[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-25 3.2e-22 78.2 0.0 2 89 116 199 115 199 0.94
2 2 0.75 1.8e+03 -1.2 0.0 44 65 1074 1096 1072 1108 0.74

Sequence Information

Coding Sequence
ATGGTCTCGAAGCTCCACGGGGGCAACAACAGATACCAGTGCCAGGGCCCCTTCATCGATAGTCTCGGGGCGAGCAGGCGGGCTACCGAGAACTCGGCGATGGGCCAGAAGGAGGACTTTGAGTTCCGGATACCGCCCGAGGCCCCGGTCTTCGAGCCGACGAGCGAGGAGTTCCTCGACCCTCTCGGCTACATCGCCAAGATCCGCCCGATCGCGGAGAAGTCGGGCATCTGCAAGATAAAACCGCCACCCAATTGGCAACCACCATTTGCTGTGGATGTAGACAAATTTAAATTTGTTCCAAGAATACAAAGGTTAAATGAGTTAGAAGCAAAAACAAGGATCAAACTTAATTTCTTGGATCAAATTGCAAAATTTTGGGAACTTCAAGGATCTTCTTTAAAAATTCCATTAGTTGAACGTAAAGCTTTGGATCTATATTCATTACACAGAATAGTGACTGATGAAGGTGGAATTGAAAATGTAACAAAAGAGAGGAGATGGGCAAAAATAGCAAATAAATTAGGCTATCCTTCCGGACGCAGTGTTGGAAGTATTCTCAAGAGTCATTATGAAAGAATTTTATATCCATTTGACGTTTTTAAACAAGGAAAAACTTTGGCTGATATAAAAATTGAACCAGACAGCGATGCAAATGAAAAGAAAGACAGAGATTATAAACCACATGGAATTATTTCGAGGCAGCAGATCAAACCACCACAAGAAAAGTTTTCTCGACGATCAAAACGTTTTTCTGGACAAGATGAGAAACAAAATGGATGTCAATCAACCATTAAACAAGAAGATTGTAAGGAGGAACTGGATATGGATTGTAAAATCAATATTAAAAGTAAAAATTTTGTTGATACTAAGGATAATATGAAAGGTAAAAACCTGATAGACTCCAAGGACAATATTAAAGGTAAAGTTTTGCCAGACTCAAAGGATAATATTAAAACTAGAGGTGCAACATCAGAAAAGGATAAAGAAAACAGTAAAGAACTTAAAAAATTACAATTTTATGGAGCTGGTCCAAAAATGGCTGGCTTTAATACCAAAGAAACAAATAAGAAATCAAATAAAACTAGGGGAGTAAAACTAGTCTATGAATTTGACCCACTGGCTAAATACATTTGTCATAATTGTGGAAAAGGAGATAATGAAGAAAATATGTTACTTTGTGATGGATGTGACGACAGTTATCACACGTGTTGTCTGATGCCTCCATTAACAGAAATCCCTAAAGGAGACTGGCGATGTCCCAAATGCGTTGCAGAAGAAGTATCAAAGCCCATGGAAGCTTTTGGATTTGAGCAAGCACAGAGAGAATACACTCTGCAACAGTTTGGAGAAATGGCAGATCAATTTAAAAGCGACTATTTCAACATGCCCGTACATATGGTACCTACTGAACTTGTGGAAAAAGAGTTTTGGAGAATAGTATCATCTATTGATGAAGATGTTACTGTTGAATATGGAGCTGACTTACATACAATGGACCATGGATCTGGTTTCCCAACAAAAACAAGTGTCAATCTTTTTACTTGTGATCAAGAATATGCAGAATCTTCTTGGAACCTAAACAATTTACCAGTATTACAAGGAAGTGTTCTTGGACACATTAATGCAGACATTAGTGGAATGAAAGTTCCATGGATGTATGTGGGAATGTGTTTTGCAACATTTTGTTGGCATAACGAAGACCATTGGAGTTATTCTATTAATTATTTACATTGGGGGGAACCAAAAACATGGTATGGTGTCCCTGGTTCCGAAGCTGAGAAATTTGAACGATCTATGAAATCTGCTGCACCTGAACTTTTTCACAGTCAACCAGATTTACTTCATCAATTAGTAACCATTATGAATCCTAATATTCTTACAAGTGAAGGTGTACCAGTATTCAGAACAGACCAACATGCTGGTGAATTTGTTGTTACTTTTCCTAGAGCTTATCATGCAGGTTTCAACCAAGGCTATAATTTTGCTGAAGCTGTAAATTTTGCTCCTGCAGATTGGTTGCAGATTGGCAGAGACTGTATTGCTCATTATTCAAATCTTAGACGATTCTGTGTTTTTTCCCATGATGAATTAGTTTGCAAAATGTCTTTAGAACCAGACACATTAGACATTGGAATAGCTACTGCAACATATCATGATATGTTAACAATGGTTGAGGATGAAAAGAAACTACGAAAGAATTTACTAGAATGGGGTGTTACTGAAGCAGAGAGAGAGGCTTTCGAACTTTTACCTGACGACGAAAGACAGTGCGAGGCATGTAAGACTACATGTTTCTTGAGTGCAGTGACCTGCGTGTGCCACAAGTCACAATTGGTTTGTTTAAGGCATTTCACAGAACTCTGCGAATGCCCTCCTGAAAAGCATACTTTACGATACAGATATACTCTAGACGAGTTACCAATCATGTTGCAAAAATTAAAATTAAAAGCAGAGTCTTTTGACTCATGGGCTAGCAAGGTGAAAGAAGCTATGGATCCAAAAGGAGAGAAAATTGAACTGAATGAATTGAAAGAATTGTTAGATGAAGCAGAAGTAAAAAAATTTCCAGAAAGTGAATTACTTACTGCTCTAACAACTGCTGTTCAAGATGCTGAAAAATGTGCTAGTGTTGCGAGACAGTTGTTGAGTAATAAGCAGAGAACAAGGACAAGGCAATCTGTTGATGCAAAGTTCAAACTGACAGTTGAAGAACTTACTCTATTTCATCAGGAAATTACAAACCTTTGCTGTGAACTTAAAGAAGCTGATGGTGTTAAATACATACTAGATCAAGTTCTTCAATTTCAAAGGGATGCAGAGGAAATAGAAAGTGAAGAAATTGATTGCAATATTGAAAAACTTGAAAAGTGTATTGAGTATGGTGATTCAATTTGTATTGAATTACCACAGCTTGCGAGATTAAAACAGAAATTACAACAGCTGCGTTGGTTGGAAGAGGTTAAATCCATTCAGGAAGAATCAAAATCTGTAACAAGACAAGATTTAGGAAAACTTATAGAAGAAGGGATGAACATTCCTCCACATTCAACTATTGAAAATGCTTTAGCTCAACTTCAAGCTTTAATGATTAGTATTGATAATTGGGAGGACAAGGCAAAACTTTATCTTCAAGCATCTAAAAATAGACAAACAATTTCATCTGTTGAAGAACTAATTATAGAAGCAGATAATATTGATGCATATTTACCAGGATTAGGAAATCTAAAGGACGTTTTGAACAAAGCTAAGAATTGGACCAAAATTATTGAAGAAATTCAAGCTAGAGAAAATTTTCCATATTATGATACTTTAGATGAACTAGTTCGTAAAGGTAGAACTATTCCATTGCATCTTGCTGCTTTACCTGTTCTTGAATCAACTTTAGCCCAAGCAAAAATATGGAAAGAAAGAACAGCAAGAACATTCCTTAGAAAAAATTCGCATTATACATTGATGGAAGCACTTTCACCGAGAATTGGGGTTGGACTTCATGCTATGAAAACTCGTAAAAATAACAAAGGAGAGGATTCTATTGGCGCCGTGTTTGTTTGCGATACTAAATTAGATGATTCTAATGATTCGGCGACTGTTGTGGCTGCTTTTAAATTAGCTGAACAACGTGAAATGGAAGCTATGAAAAACTTAAGAGAAAGAAACGTGAGCAAAATGGAAATTGATGACTCAAGGTTTTGTGTTTGTCGACGATCAAAATTCGGCCAAATGTTACGTTGTGAACTTTGCAAAGATTGGTTCCACACTAACTGCGTTCCAGTACCAAGAACTCCTTACAAAGGCAAACAACAGACTTCAAGAGTGACTAAATTTTTATGCCCATGTTGCTTACGTTCACGTAGACCACGCTTAGAAACTATTTTATCACTTTTAGTAAGTCTTCAAAAAATTCCTGTTCGTTTACCAGAGGGTGAAGCTTTACAATGTTTGACAGAACGTGCAATGAATTGGCAGGATCGAGCAAGACAAGCTTTGTCTGCTGAAGAAGTATCTTCAGTATTAGCAAAACTCAGCATTTTATCGCAAAAATTAACGGAAGCAGCTGCTAGAGAGAAAACTGAAAAAATTATAAGTACTGAATTAAAAAAGGCAGCAAATAATCCAGAACTTCATCAAAGGGTTCAAGTTATCGCTTCTTTGAGTGGTGTACATTCTGATGATAGTGTAATAAGTGTTCCTGATGATGATGAAAGAATTGATGAAGATGATGATGATGATAGCGATGATGATGTACTAACAATTGACGAAGATGAACCAAGTAGTAGTGCTTTCAATAGCAATGAGCATGCTTATTCATCAGCGTCAAAATTCCCTTCAAAATCGGCATCAGGCGAAGATAAGGATAAGATAGTAACATTATCGAATAGTACGACTACGCACTTAGAGGAACTGATGATGGAAGGAGATCTTTTAGAAGTTGCTTTAGATGAAACTGAGCACATATGGCGAATCCTTAGTCAAACGTGTACACCCACAAAAAGCATTCGTAAATATGCACCATTGGACCAAGCAACACCCATCATAGACTCTAAAGATCTTAAAAAACAGCCCCAACAGAGAGGCCGAAAACGTAAATCTGATGAATTTGAATTGATGAAAAAATTTGGTCGTCAAAGAACAGATGAAAAGCCTATAGTAAAACGCAAAGGATTAACTAAAGATACAAAATCAGCTGTTCCAGTAACATCTATGAAGAGAGGACCTCGTAAGATGAAACGAAAGGACAGTGATGAAGGGCCAAAAAGACGAACTGGAAACAGGAAAAAAACCAAACAAGATACATCCGATGAAGAAGAGGATTGTGCTGCTGTTAATTGTTTAAGACCTAATGGACGTGAGGTAGACTGGGTTCAATGTGATGGAGGTTGTAATGGCTGGTTTCATATGCATTGCGTTGGTTTGGATCGTACAGAGCTTGCTGAAGAAGATGATTATATTTGCAGTAATTGCAGTGAAGCAGAAGTAAACTCATCGAGTCAACAGGATTACCATTCATCGCAGTCGTCGCACACCGAGGCCTCCGACAATGAAGACGAGTTGGAAGAGGACCTACAAGAGACTGTCGATGTCATTAATATCTATTAA
Protein Sequence
MVSKLHGGNNRYQCQGPFIDSLGASRRATENSAMGQKEDFEFRIPPEAPVFEPTSEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIENVTKERRWAKIANKLGYPSGRSVGSILKSHYERILYPFDVFKQGKTLADIKIEPDSDANEKKDRDYKPHGIISRQQIKPPQEKFSRRSKRFSGQDEKQNGCQSTIKQEDCKEELDMDCKINIKSKNFVDTKDNMKGKNLIDSKDNIKGKVLPDSKDNIKTRGATSEKDKENSKELKKLQFYGAGPKMAGFNTKETNKKSNKTRGVKLVYEFDPLAKYICHNCGKGDNEENMLLCDGCDDSYHTCCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLQGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAEKFERSMKSAAPELFHSQPDLLHQLVTIMNPNILTSEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLQIGRDCIAHYSNLRRFCVFSHDELVCKMSLEPDTLDIGIATATYHDMLTMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCVCHKSQLVCLRHFTELCECPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWASKVKEAMDPKGEKIELNELKELLDEAEVKKFPESELLTALTTAVQDAEKCASVARQLLSNKQRTRTRQSVDAKFKLTVEELTLFHQEITNLCCELKEADGVKYILDQVLQFQRDAEEIESEEIDCNIEKLEKCIEYGDSICIELPQLARLKQKLQQLRWLEEVKSIQEESKSVTRQDLGKLIEEGMNIPPHSTIENALAQLQALMISIDNWEDKAKLYLQASKNRQTISSVEELIIEADNIDAYLPGLGNLKDVLNKAKNWTKIIEEIQARENFPYYDTLDELVRKGRTIPLHLAALPVLESTLAQAKIWKERTARTFLRKNSHYTLMEALSPRIGVGLHAMKTRKNNKGEDSIGAVFVCDTKLDDSNDSATVVAAFKLAEQREMEAMKNLRERNVSKMEIDDSRFCVCRRSKFGQMLRCELCKDWFHTNCVPVPRTPYKGKQQTSRVTKFLCPCCLRSRRPRLETILSLLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALSAEEVSSVLAKLSILSQKLTEAAAREKTEKIISTELKKAANNPELHQRVQVIASLSGVHSDDSVISVPDDDERIDEDDDDDSDDDVLTIDEDEPSSSAFNSNEHAYSSASKFPSKSASGEDKDKIVTLSNSTTTHLEELMMEGDLLEVALDETEHIWRILSQTCTPTKSIRKYAPLDQATPIIDSKDLKKQPQQRGRKRKSDEFELMKKFGRQRTDEKPIVKRKGLTKDTKSAVPVTSMKRGPRKMKRKDSDEGPKRRTGNRKKTKQDTSDEEEDCAAVNCLRPNGREVDWVQCDGGCNGWFHMHCVGLDRTELAEEDDYICSNCSEAEVNSSSQQDYHSSQSSHTEASDNEDELEEDLQETVDVINIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309292;
90% Identity
iTF_01218866;
80% Identity
-