Basic Information

Insect: Eupristina koningsbergeri
Gene Symbol: -
Assembly: GCA_018907245.1
Location: JACCHV010000005.1:4010407-4011855[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0031 1.2 11.6 0.2 2 23 55 77 54 77 0.91

2 9 0.0005 0.19 14.1 2.8 1 23 81 103 81 103 0.99

3 9 0.13 47 6.5 5.7 1 23 109 132 109 132 0.95

4 9 0.00013 0.049 15.9 4.1 1 23 139 162 139 162 0.96

5 9 1.3 5e+02 3.3 0.8 3 15 169 181 167 188 0.75

6 9 6.9e-06 0.0026 19.9 1.8 1 23 199 221 199 221 0.98

7 9 3.3e-06 0.0012 20.9 0.1 1 23 225 247 225 247 0.98

8 9 0.0018 0.66 12.3 2.1 5 23 255 273 251 273 0.92

9 9 1.3e-06 0.00047 22.2 2.7 1 23 279 301 279 301 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0031	1.2	11.6	0.2	2	23	55	77	54	77	0.91
2	9	0.0005	0.19	14.1	2.8	1	23	81	103	81	103	0.99
3	9	0.13	47	6.5	5.7	1	23	109	132	109	132	0.95
4	9	0.00013	0.049	15.9	4.1	1	23	139	162	139	162	0.96
5	9	1.3	5e+02	3.3	0.8	3	15	169	181	167	188	0.75
6	9	6.9e-06	0.0026	19.9	1.8	1	23	199	221	199	221	0.98
7	9	3.3e-06	0.0012	20.9	0.1	1	23	225	247	225	247	0.98
8	9	0.0018	0.66	12.3	2.1	5	23	255	273	251	273	0.92
9	9	1.3e-06	0.00047	22.2	2.7	1	23	279	301	279	301	0.99

Sequence Information

Coding Sequence: ATGAACAAAAGCTCCAGTGGCCCTGAAAAAGAAAAAACGGGTACAGTAAAAGAAAGCTGTCCCGAGGTCCTCGAGTCTAAGCTTGTTGGCAACTCGTATCGCGTGCGCCGAAAGCCAGGCTGGCTCAATGACAGTGTCACTGACTTCGATAGTCTCAGGGATGTTTGCCCGTTTTGTGACAAGCGCTTTAAAGATGATCGTCGTGTGGCTATGCACGTGCGTAACGTCCACAAAAAGCCTTACAAGTGCGACTTGTGTCGACGCCAGTACTTTAGCCGGGATGTCCTGGAAAAGCACCGGAAAACTCACAATATCAACTCGCATTTCGAGTGCTCGGTCTGCCACTTCAAGTACAAGCGCGAGGAAACTCTGCAGTGTCATTATCTGCGCGAGCACAGTAACATCGAGGCAAATTTCCGATGTGGACACTGCAACAAGTGCTACAAACTTAAGCAGGACCTGATTTTGCACATCAATCAGGTGCACTTGTGCAGCTATCAGATATGTCGTTTTTGTGGAAAAACCGTGAAGAATGTCAAGGCACACGAATGGCATCACCAAAAGAAACTCGGCATTTTAAATAGCTCCCAGGTGTTCCCGTGCAGCCTCTGCTTTAAAAAGTTTCGCAGCGAGTCGAAACTCGAGAATCATCTCATGCGTCATGTGCAGAGATATCGATGCGAAGAATGCGGTGAGACTTTCCCAGGTCCAGGGCAGCTCATGAATCATAAGTCTAAGCACAGACCCCAGATCATGTGCATTATGTGCACGAAGCACTTCAGCTCCAGAAGCAATTACTATCAACACGTGCTCATGCACGCCAAGGTCAGACCTTATAAATGCGACGTCTGCCACGAAGACTTCACTCAGAGGTCAACATTAGTCAGACACAGAAAGATTCATCCAGATCCGTTGCCCCGTTCTTTGGCCCAAGTACCAATTGCTGAACTCGCCAGACAGGTTCTAAAGAGCTTTAAAAATTTTACTTAA
Protein Sequence: MNKSSSGPEKEKTGTVKESCPEVLESKLVGNSYRVRRKPGWLNDSVTDFDSLRDVCPFCDKRFKDDRRVAMHVRNVHKKPYKCDLCRRQYFSRDVLEKHRKTHNINSHFECSVCHFKYKREETLQCHYLREHSNIEANFRCGHCNKCYKLKQDLILHINQVHLCSYQICRFCGKTVKNVKAHEWHHQKKLGILNSSQVFPCSLCFKKFRSESKLENHLMRHVQRYRCEECGETFPGPGQLMNHKSKHRPQIMCIMCTKHFSSRSNYYQHVLMHAKVRPYKCDVCHEDFTQRSTLVRHRKIHPDPLPRSLAQVPIAELARQVLKSFKNFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -