Basic Information

Insect: Eupristina koningsbergeri
Gene Symbol: -
Assembly: GCA_018907245.1
Location: JACCHV010000061.1:2750943-2756500[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.2e-06 0.00084 21.4 1.4 1 23 147 169 147 169 0.98

2 15 4.8e-05 0.018 17.3 0.2 3 23 177 197 176 197 0.99

3 15 0.00045 0.17 14.2 0.1 1 23 284 306 284 306 0.98

4 15 0.0015 0.58 12.5 0.2 1 23 312 335 312 335 0.97

5 15 0.00015 0.055 15.7 1.9 1 23 362 384 362 384 0.97

6 15 1.3 4.9e+02 3.3 0.0 1 23 399 421 399 421 0.86

7 15 0.037 14 8.2 0.3 2 23 429 451 429 451 0.95

8 15 0.0072 2.7 10.4 2.2 2 19 459 476 459 480 0.94

9 15 0.00015 0.055 15.7 3.5 3 23 488 508 486 508 0.97

10 15 0.011 4 9.9 0.1 3 23 515 535 514 535 0.97

11 15 6.1e-06 0.0023 20.1 0.4 1 23 544 566 544 566 0.98

12 15 0.0027 1 11.8 0.2 3 23 574 594 572 594 0.97

13 15 0.0024 0.88 11.9 0.2 3 23 602 622 600 623 0.94

14 15 0.0046 1.7 11.0 0.0 1 23 637 659 637 659 0.95

15 15 0.0061 2.3 10.6 0.0 1 20 1067 1086 1067 1089 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.2e-06	0.00084	21.4	1.4	1	23	147	169	147	169	0.98
2	15	4.8e-05	0.018	17.3	0.2	3	23	177	197	176	197	0.99
3	15	0.00045	0.17	14.2	0.1	1	23	284	306	284	306	0.98
4	15	0.0015	0.58	12.5	0.2	1	23	312	335	312	335	0.97
5	15	0.00015	0.055	15.7	1.9	1	23	362	384	362	384	0.97
6	15	1.3	4.9e+02	3.3	0.0	1	23	399	421	399	421	0.86
7	15	0.037	14	8.2	0.3	2	23	429	451	429	451	0.95
8	15	0.0072	2.7	10.4	2.2	2	19	459	476	459	480	0.94
9	15	0.00015	0.055	15.7	3.5	3	23	488	508	486	508	0.97
10	15	0.011	4	9.9	0.1	3	23	515	535	514	535	0.97
11	15	6.1e-06	0.0023	20.1	0.4	1	23	544	566	544	566	0.98
12	15	0.0027	1	11.8	0.2	3	23	574	594	572	594	0.97
13	15	0.0024	0.88	11.9	0.2	3	23	602	622	600	623	0.94
14	15	0.0046	1.7	11.0	0.0	1	23	637	659	637	659	0.95
15	15	0.0061	2.3	10.6	0.0	1	20	1067	1086	1067	1089	0.94

Sequence Information

Coding Sequence: ATGGATGTTGGTGGTGATTTAACTCTACAATGGGTAGAGGAGGTAGGCAATGTTATTCATGAAGAGGTAATATGTGGTTTAGAGGCAGAATTAGATGCTCCTGTGGAGGAAGTTGTAGGAGCATGCGAAGAAGTAACTGTAGAAGAAACAGTGGAATCTGTTGTAGAAGATTCTACTCCTATAACGGATACAGAAATTTTAATGGTTCCACAGACAAGTGATATGGAATCAATATATATTGTTCCACAAGATCAGGGTCATGATTATCTCAATATCCAAGTTACTGAAGAAGTAATTACTGATAACTGGGATAGATCAGGTCCAGACGATGGAATGGAAGTACCAGAGACCAAAGTTTCACATGATAATTTATTGGAATATGATGATATGGAAATACCTTTACCAATTGATCAAGATTCTTACACAAATACACGACCATATCCTTGTGACTTCTGCAGCAAAAGATTTAGAAAAAAAGCAAATCTTATGAACCACATGGTAACTCATCAAACAGAACGACCTCATGGATGTAATTTATGTGGTGCTCGTTATGTAAGAAAGTCTGATTTAATGAATCATTTAAAAATCCATGCATATGCTCCATCTCGAGATGGTTTAGAAGATGATCTCGAAGATCCATTAGCTACTGAAGAAGAAGAAAATCATCCAATAAAAGGTCGTCGAAAGAGGGTACAGACAAATGTTCCTAGAAAACGTAAAACTACTTCTCTAGGAAATAAGAGAAATATTGATGATGGATCAAAATTAGATATGAGCAAGTGGACAGACCAATTAACATCAGCTGAACAACAGGTACCTCGTTGGCCAGTTACTGACGCTACAAAACCGTATGTTTGCCAATTTTGTGGAGTTGGTTTTGCAAGAGAGAAAGCCTTAGCATCCCATTCTCGCATTCATGGTGGAGATAGTCCATTTGAGTGCACATCTTGTGGTGAAATGTTTTGGGACATCAATTCACTTCAAGAACATATGAGAGTTAAGCATGGAATTGGTATTGTACAATCTGACCAGGATGAAATAGAAAATGAGTCCACATATGCAGGGGATGAAAGATTTGGTGAATTCTTTTGTGACACATGTGGAGTCCCCTTTCATAGATTAGATCTTTTAAAAAGACATAGAAAGATTCACATAAAGCAAGAAATAGATACATTAGAAGGTTCCAGTCAACATCATGTTTGTAATGTATGTGGTGAGTGGTTTGAAGAAGCATTAGCATTACTGGCACATGCAGAATTGCATGCGAGTAGGTCGCCCAGTCGTAGGTGTTTATTATGTGGCGAAAAATGTCGAGATGATGCTGAACTTGCCGAACACGTTCGTGAAATGCATGCAGAAGATGCACCTCCTAATACATGCGTTTTATGTGGAAAAACTTGCAAAGATAAACGAAGTTTGTTAAAACATTCATGGATTCATAATACTGATAAAACATTTGGATGTACAAAATGTGGAAAACGCTTTCACAGTAAAGCTAGGTTACGAAGGCATATGGTGTCACATCGTAATAAAATGGTTGCCTGTGATGAATGTGGAGAGGAGTTTCCAGATGGTAGAGCTTTGGTTAGTCATCGTCATTCTCACAATAAAGACTTGGGTGGACGTACGTTTCCTTGTAGAGAGTGTGGTAAAACTTTTGGTAGTCGTAGCTCACAACAAATACATATCCGGATACATACTGGTGAGAGGCCTTATGGCTGCCGCTTTTGTTGGAAGGCTTTTGCTGATGGTGGAACTTTAAGAAAGCATGAAAGGATACACACAGGAGAGAAGCCATATGGATGTGCCATTTGCCCCCGTGCTTTTAATCAAAGAGTAGTATTGCGAGAGCATGTTAGAGCTCATCATTCAGGCCCTGATCCCAAATGTCACAACAGTCTTACTCCTTATATGTGTAAGGTGTGTGGTGATACACTTTCCAGTTCTGACGAACTTGTTGCTCACATTGTTGCACATTGTGACGAAAATACGGCAATGCGTCGGCAGCCACAATCTGGCCCAAGGAAGTACAAACGCCGACGCAAATTAAAACACGAAGGTTCCGCACTTGGCTCCCGTATAAATGAATCTTTCGATATGTTCGATGGTCCCTCGGATTCAGATGAAAACACAAAACGCAAACTTGGTAAAAAAACGAAGCAACATCGTAGCAACGTTGAAGAAGGATACCAAAATGTTCTTAAAAGCTTTGAAAGCTCATTGCAAAATATAAATTCAATTGTAAGTAATTCAAAAACGTATCCATCGAAGACAAAAACCCCAAAGAAGAAGCTGAAAAAAGAAGAAAAGAAAAGCGCAGGTGCGGCTGTGGTCACGGACGCACCCACTACCAATCACCCAGGAAGACCAAAGATGATTCATACGCAAAAAACGCGCGTGCCCGTGGAAATTGGCACAGATGGGGTGAAAAAAGGTCAAAAGACAAAAACAATGGTGACGCGAACGCCTAAGGTAATACCCAATGAACAAAAAACTTCAGGTATGTTCCCAGGCGGTGAAAGAAATAGGCCACGAACAAAAAACGTTAGTTATCATGTCGAAGGTAGGCAACAGTTAGTTCCTGCAATCTTTCCTAAACCAAGGGATAGTGAGTCTATTGAATCGGAGGTTCCCGGTATTGAGATGGTTAACATTAAAATCGAGCCCGATCTGCATAAGTTATCAGCAAATCAAAATCATACAATCAATAATAATGGTAACATTCTCGATTTTAAACCAGAAAAGCTAAAAAAGGTTGAGAAGCCTACAGTTAAAAAGCGAGTTGCCGTCAAGAGAACGAAACGAAGACAGCCTGTCGGTGCGAAAAGAGTAAAAGAGAAGTCACTTCCGCTCGATACCAGCATGTCCAATAATAACAACCTAGAAGAAGAGGAAGAGGAAGAGGAAGAAATAGAGCAACAGGTACAGCCAGCTCAGCTGTTCGAATCGGTGGTCGATGGAAACAATCTTGAGGTGGCTTTCGAAGCAAGCGTTGTCTCTGAGCAAGATATCATACAGGAATCTATACTTCCGGACCTAGATAAAGTTAATCATGTAGAGGAGATTGATTCACCAGTTGGAAATGTGAAGCTCAGTGTAAAAGTCGAGTCGACACCCGACAGTATACTCGACGTGCACAGTTTGATTGGGGCGGTGGAGGAATCGGTACCAGAAACCATTATACCAGACAATGTTGAGTATACTTGCGAGATGTGTGCTGCGGTGTTTTCTACACGCGCCGAGTTACTGGTGCACGTGCCCATACATATTTGA
Protein Sequence: MDVGGDLTLQWVEEVGNVIHEEVICGLEAELDAPVEEVVGACEEVTVEETVESVVEDSTPITDTEILMVPQTSDMESIYIVPQDQGHDYLNIQVTEEVITDNWDRSGPDDGMEVPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSKRFRKKANLMNHMVTHQTERPHGCNLCGARYVRKSDLMNHLKIHAYAPSRDGLEDDLEDPLATEEEENHPIKGRRKRVQTNVPRKRKTTSLGNKRNIDDGSKLDMSKWTDQLTSAEQQVPRWPVTDATKPYVCQFCGVGFAREKALASHSRIHGGDSPFECTSCGEMFWDINSLQEHMRVKHGIGIVQSDQDEIENESTYAGDERFGEFFCDTCGVPFHRLDLLKRHRKIHIKQEIDTLEGSSQHHVCNVCGEWFEEALALLAHAELHASRSPSRRCLLCGEKCRDDAELAEHVREMHAEDAPPNTCVLCGKTCKDKRSLLKHSWIHNTDKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKDLGGRTFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCHNSLTPYMCKVCGDTLSSSDELVAHIVAHCDENTAMRRQPQSGPRKYKRRRKLKHEGSALGSRINESFDMFDGPSDSDENTKRKLGKKTKQHRSNVEEGYQNVLKSFESSLQNINSIVSNSKTYPSKTKTPKKKLKKEEKKSAGAAVVTDAPTTNHPGRPKMIHTQKTRVPVEIGTDGVKKGQKTKTMVTRTPKVIPNEQKTSGMFPGGERNRPRTKNVSYHVEGRQQLVPAIFPKPRDSESIESEVPGIEMVNIKIEPDLHKLSANQNHTINNNGNILDFKPEKLKKVEKPTVKKRVAVKRTKRRQPVGAKRVKEKSLPLDTSMSNNNNLEEEEEEEEEIEQQVQPAQLFESVVDGNNLEVAFEASVVSEQDIIQESILPDLDKVNHVEEIDSPVGNVKLSVKVESTPDSILDVHSLIGAVEESVPETIIPDNVEYTCEMCAAVFSTRAELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01219230;
90% Identity: iTF_01216956;
80% Identity: -