Basic Information

Gene Symbol
-
Assembly
GCA_018907245.1
Location
JACCHV010000008.1:3745305-3752017[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.63 2.3e+03 0.6 0.2 30 44 602 616 598 616 0.80
2 3 9.5 3.5e+04 -3.2 0.0 21 31 999 1009 988 1012 0.78
3 3 1.9e-07 0.0007 21.5 0.0 3 46 1352 1397 1350 1397 0.90

Sequence Information

Coding Sequence
ATGGATGACTCTACAGTAGAAAACAGTTTGTCCTTTTCATTTAATTTAGATTTGGACACTGTTGATAGTGATGGTTCATCAGATTCAGATACAACTGGATTACAAATTGATGTTTCAGAAGTAGATAATTTTAATGATACTAATAAATTAAGAAGACAAATTGTTGATGATGCATCTTTTTTAAACAAAATGGAAGAAGAAATAGAAAGGCAATTAGATGCAAAAGCATCTAAAACAAATTTAACTGCAACAAATGTTAAAAATATTTTAAAACATGTCATTTCTAACGAACATGTTATGGCAATGGTTCAAACACGACTTACGAAAGGAGAAGATGATATAGTTTTTGAACCAAAATTAACAAGAGCTAAGGCAAAAGAATTAGCGATGGCACAACCTGATATTCCTTGGCCTATAACACCTGTAAAAAGTACAACTTCTGATGTACAAATACTTATTCAAGAAGAATTTTCTGAAGATTCATCTGATGAGGAGTATCGCCCAGATCAAGATCAACAAAGTGATGATGATAAAGATGTTGATAATTCTGTAGGAAGTGATGTAGACTCTCAACCATCTACACCAGCAACTCCTGGTGATAAGTCAAATTATTTTGAAACATCGAATGTTCAAAATATTCAATATGATAAGGAAGGAATTTTTAAAATACCACTTATGATTCCACATGTTCCAACAGAAGAAGAAAGTATAGGCCACAGGACACGTTCAAAACTTTGTCTTAGTGAAACACCTTTAGAACAAATTGAACAAGCATTTATTCCACCAGATATTACAACTGATATGTATGATTGGGATTGGGAACCAGAAGATGAATATATTAATTTTTTAAAAGAATTATATACTCAACCTCTTCAAAAAGAAATAAACGTTGAAGATGATCCTGAAGCAGATCCAGAATATAATATTTTGGAAGATGAAGAAACAGATTTACGTAAAGCAGTAAAAGTGTCAAAAAAAGAATTAAAAACATTAATAGCCGAGCTTGATGAATTTGCGGATCAATATACCAAACAGCAACAGCAACAACAAGCACAGCAACAACAAAAAATACCAAAGAAAAAAAAAACTCTTGATACTTCAATCACATTAATAGAAAACACTTCTCTAGGAAATCCGATGGTTGATCTATTACCTGTATTATCTGAACCAGATCTTCCAGAACTAATTAATCCTAATCAACGTTACTTATTATCTGTACAAATTTCTCAGCATGTTCAATTAATGGTACAACAATATGTCATGAGTTATAAGCATCCTAAATGGCATAAACAATCAGTAATTTGTAAAAGTAATTTAAATAGTTTAAGAACACTAGGGGATAAATCAAATTCAGAATTCATAGCTAATAATCTTGATGATGCTTTTTCTTTAGTTTCTGATTGGGATTTAAAATTATCTGATCCAAAGTTTTTAAATGAGTATATTTACCATTTAGAAACTGAAGCAGAAAATGAAGCAATTGCTTATAGATCAAAAAAAAAGTATAAAAATAAATTTCATCCTGAATTAATTAAATTAATGGCTCACAGTAAAGCACTAATGCATCCCCAATTACTACCAGACTCATTTCCAAGTTCTCTTGAAATAAATAATTCATCATATTTACCATCTGAAAATAATCTTATTGCTTTGGGATTGGAACAATTTTTACCATATGTAAAAGCAATACCAAAAAAATTTTCAAGTAACCGCAATAGATTTATTGATGCTGTAAAAGAAATACAAAAATATTTGATTCCAGTTAAAACTATAATTGGATTAATTTATTATATACAAAAATGTAAAAATAGTAAAACGCATAATTCTATCAAGCACTATTTTATAAATGGATTTGCTCCAAGAACAGAACATCGTATTTTGAAGGAATATCAGTTAATATCTCCAATAGATCAACCAATAGAATATTTGCCACCAGTTTGGAAAGATTTTGTGCATATGTTAAAAAAGGGCAATATTGATGATTACTTAATATTTTTAAAAACTCAGAAAAATAAAACACTCGACTATGATAACGAATTTATTTCTATTTCTTCTGATGAAGTCTTACATACAGGTCATCACTTGAGAAATCCAATTATAAATATGTTTAGACACATGCCTTCATTGACTACTCCTCAGAAAATTGAATCCAGTAACTTATTATCTAAAATTAACAATACAAAAACCAAAGCAATGCAATTAAAAATGAATGAAGCAGAATCTGATGTCGAGTCTGCTGAGAGTTTAAGAACATGTGAAACAGATGAAGAAGAATCACGTCCAACACGTTTAAGAATGACTACACCGCGTTTAGCAAAAATTAAAAGTGTGCAAAATATGAAATTACTGGCTCAAAATTTATCTCCCAAAGCATCGACATCAAATAGTCATACTAATGAAAGCTTTGATAAGATTGATGATGATGCATCTTCTTTTACAAAAGGGGATAATGAAGATGAAATAGCTGAACTTATGTTGGCTAGCACAACTATTAAAAAAAACACAGCTAGTCGCAAAAAAACTAAGCAAGCTAGAGAATTAGAAAACTTAAAAAGATTGTTAGAAGTAGAAAATAATATAAATGAAGACGAAAGAGCAACAAAATTTGCTGCATCGTTTATTCAAAAAATACATGTTAAATTAGAATCAAAAGATCCAGAATTATTTAAGACTGTATTAAAGGTTTTTTTGGATTATAGTGAAAAGTTAGAAAATTCTAATCAACCTAATAGTGATGATTATTTTTTAAATGAAGTGTCATCCCTAGATTGCGAAAGTAATCAAACTAGAGACAAATGTGAAATAGATAGAGATAAGCTTGCAGTGAATCTTTATAAAGAAGTTTGTGAAAAATTATATGAGTATCCAGATCTTTGTTCCGATTTCCTATTATTTTTAACACCTCATCAGGCTGCTCTTATTGATAAATCTATAGATCATACAATGATGTTAAAAATGAAAGAATTTGTAAATATAACTCAAATGTATTTTGCAAAGCAACCCTCTCGTATTGCAAAGGTAATGCAAGCAATGACACAAATGGCTTCAGACCCTTATGTAACTGTTGAAATTGCACAAAATACTATGGCTACAGCACTCAAGGGTCATCCTTTAATTATGGACATGTTTTTGCAAATTTTACCTACGGGTAAACCTCCTCATAGCTTATTTGTTGCTCATTTATTTGAAAACTTATCGTGTCCAGTGGGACCACATGATAAAAGTAAAACATACGATGCAGATGCTCCAGAATTATATGAAAATATTGAATTACCAGTATCCACACCACAAGAGGATCCTTATGGAGGTGATGGTTGTAAATGTGATTGTCATAGTCTAGTCGATTCAAAATTAAAAGGAATTAATGAACATTGTGCATCATGTGGAACAAGGTTTTTAAATGGAAGAATATATTTACAAACTTCTGAGGGTCTGAGACCAGCCAAAATTACGTTTCCTGGTGCAGATGAAGAAAAATTAGAAAATATTTCACGTGTATCCCTTAAGACTACTGAAAGATTTATTCCTTGTCCACCAACTAGAAAGCGTCGGAAATCTTCGAAGCGCGATTCTATATCGGAAGAGTCTAGCTTGAAACCTTGTTCATCCAAGGGTTCTCCTGTGAAGGATAATGAAGACAGTGATAGATCAACATCGAAACCTAAAAAAGGAAATAAGTCGCCATCAAAAACAACAGAGCATAAGAAAGCAACTAAGCAATCAGCGTCTGTGAAATCTAAACGAGAAAAAAAGACTGAAAAGAAACATAATAAATCTGAGCAAAGAATTGATGATGATCAAAATGAATTTAGTGTAAATAGAGATAATGTGGAGTTTGAAGAAAGTGGTGTAAGCACTGTAAATGAAGACTATGTAGAATTAGATACATTTGGGACAAAATTTGGAGAAATAAGTACCGATAGTCATGAAGAAGATACAATGACTAGTCCAGAAAAAATTAATATTTGTTCTACAAGTGCAGATAAATTAGACGCTTCTTCTGATTCGGATAGCAGTACAAATATAGAGGCAGAAAAATCATTTACAAATACGCCATGGACAATGCAGGATGATAAAATACTTTTAGAGGGAGTTCAAAAAGAGTATTCTGAAAAAACTTTTCTTGCAATTAGTTTAATCTTGAAAAATCGATCCGTTGAACAAGTGAAAGAAAGGTGTCAATATTTACTCTCGTTAATAGAAAAAATGGCATAA
Protein Sequence
MDDSTVENSLSFSFNLDLDTVDSDGSSDSDTTGLQIDVSEVDNFNDTNKLRRQIVDDASFLNKMEEEIERQLDAKASKTNLTATNVKNILKHVISNEHVMAMVQTRLTKGEDDIVFEPKLTRAKAKELAMAQPDIPWPITPVKSTTSDVQILIQEEFSEDSSDEEYRPDQDQQSDDDKDVDNSVGSDVDSQPSTPATPGDKSNYFETSNVQNIQYDKEGIFKIPLMIPHVPTEEESIGHRTRSKLCLSETPLEQIEQAFIPPDITTDMYDWDWEPEDEYINFLKELYTQPLQKEINVEDDPEADPEYNILEDEETDLRKAVKVSKKELKTLIAELDEFADQYTKQQQQQQAQQQQKIPKKKKTLDTSITLIENTSLGNPMVDLLPVLSEPDLPELINPNQRYLLSVQISQHVQLMVQQYVMSYKHPKWHKQSVICKSNLNSLRTLGDKSNSEFIANNLDDAFSLVSDWDLKLSDPKFLNEYIYHLETEAENEAIAYRSKKKYKNKFHPELIKLMAHSKALMHPQLLPDSFPSSLEINNSSYLPSENNLIALGLEQFLPYVKAIPKKFSSNRNRFIDAVKEIQKYLIPVKTIIGLIYYIQKCKNSKTHNSIKHYFINGFAPRTEHRILKEYQLISPIDQPIEYLPPVWKDFVHMLKKGNIDDYLIFLKTQKNKTLDYDNEFISISSDEVLHTGHHLRNPIINMFRHMPSLTTPQKIESSNLLSKINNTKTKAMQLKMNEAESDVESAESLRTCETDEEESRPTRLRMTTPRLAKIKSVQNMKLLAQNLSPKASTSNSHTNESFDKIDDDASSFTKGDNEDEIAELMLASTTIKKNTASRKKTKQARELENLKRLLEVENNINEDERATKFAASFIQKIHVKLESKDPELFKTVLKVFLDYSEKLENSNQPNSDDYFLNEVSSLDCESNQTRDKCEIDRDKLAVNLYKEVCEKLYEYPDLCSDFLLFLTPHQAALIDKSIDHTMMLKMKEFVNITQMYFAKQPSRIAKVMQAMTQMASDPYVTVEIAQNTMATALKGHPLIMDMFLQILPTGKPPHSLFVAHLFENLSCPVGPHDKSKTYDADAPELYENIELPVSTPQEDPYGGDGCKCDCHSLVDSKLKGINEHCASCGTRFLNGRIYLQTSEGLRPAKITFPGADEEKLENISRVSLKTTERFIPCPPTRKRRKSSKRDSISEESSLKPCSSKGSPVKDNEDSDRSTSKPKKGNKSPSKTTEHKKATKQSASVKSKREKKTEKKHNKSEQRIDDDQNEFSVNRDNVEFEESGVSTVNEDYVELDTFGTKFGEISTDSHEEDTMTSPEKINICSTSADKLDASSDSDSSTNIEAEKSFTNTPWTMQDDKILLEGVQKEYSEKTFLAISLILKNRSVEQVKERCQYLLSLIEKMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-