Basic Information

Gene Symbol
-
Assembly
GCA_018907245.1
Location
JACCHV010000034.1:2906381-2910290[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 2.1 7.8e+03 -1.1 0.0 3 17 171 185 170 186 0.90
2 6 0.2 7.3e+02 2.2 0.0 22 43 230 253 216 256 0.73
3 6 2.2e-10 8.1e-07 30.9 0.3 1 44 262 307 262 309 0.96
4 6 8.1e-05 0.3 13.1 0.0 2 43 317 362 316 365 0.96
5 6 9.8e-13 3.6e-09 38.4 0.0 1 45 371 416 371 417 0.93
6 6 2.1e-11 7.6e-08 34.2 0.1 1 44 424 467 424 469 0.94

Sequence Information

Coding Sequence
ATGAGTGAGGATGAGGATAATCAATCTCTAATAGATGAAATTGAAGCGTTAGAAAATGCATTAGACCAAAAACGAACTTTAAGTAATAATGACTATGCTTCAACTAGTGGTATTGCAAATTCTAATGTATTGAAACAAGAGATACAATCTGCTCAAGAAATTGAATATTGTGTTGATGAAGATGGAGATCTTGTTATTGATGACATTTATGAAAATTATGAATGTAATGATTTGCAAGATCTATTAGAATTAAATAGAAAATTAATTGAAACAGTTGCAATATCTCGTGAAAAAGTTATGAAACTTCTTGATGAATGTACAAAAAAACAACGATTAATTGATGATCTAGTTTCTAAAGATGTATCTACTTGGCATTCAAAAGTAGTAAGTTTTAATGCTGGAATGCCTTATTTTAAAGATTCAAAATATTTTACACCTAAACAGAATGAAGATACACTAACTAAAATAAGAAATGGGGAATTACGTTTAGCTGAGCTTCAACGTATTCATCGGTGGAATCAACAAGATAAAAGTAATTTATTGAAAGCCATTAGGCATGAAGTGACATTAACTTTATTAAATAAAGATGAACCTGATGAAGCATATATTGATAATACAATCACCAAAACAAGTCAGCTTCCAAGTGATGTAAAAAAAGCCATTGGATCATTAGGTTCAATGAAATTTGATTGGTTAAAAATAGCTAATAATATTCCTGATAACAAACACAATGCAGAAGAATGTGAAGTTATGTGGAATGTATTTTTGCATCCAGATATTAATAAACAAAAATGGACTGCCAAAGAAGATAAAAATTTAAATCGCATCGTAGAAGATTATGATTTTGAGGATTGGGATAATATTGCTAAAAGTTTAGATACAAAACGTAGTGGTTATCAATGTTTTGTTAGATATAATACAAACAACTGGAAAAATCTCATGAAAGGCCAATCTTGGTCGCCGATAGATGATAGAACTCTTATTTATCTGGTGTCACAACTAAAAATAGGAGATTACATTCCATGGGGATATATTGCTGGCTGCATGAGTAATTGGACAAAACAACAGGTATATTTTCGATGGACATATAGTTTAGCATCGCATTTAAAAAAAGGAAGATTTTCAAAAGAGGAAGATAAAACACTTTTAGATGCAGTAGCTAAACATGGATTAAATTTTGGCAAAATATCTGCTTTAGTAATGACTAATAGAACCAGCATTCAATTAAAAGAACACTTTCAAACTTTAACAGCTAGAAATTGTAATAATAAGAAGACTTGGACAGTAGAAGAAGATGCAGTACTTTTAAATCTGAAGAAAAAATATGGTTCAAATTGGGTTAAAATTGCTCAAGAAATGCCAAATGTTACTAGAGTTCAAGCTAGACAACGCTATGCATCACTGGTGCGTTATGAACAAAAAGGTATTCCTTTAGAAAATATTAATCGGAGTGAAAATCCAGTTAGTCCACAGTCCAATCACACTACTGTTACATATACTACCAATACACCTTGGTCTCGTGAAAATAAGGAAATTTACATTAAACATTTAAAAATTGATGATCAACTTATTCATTTTTTCAAGAAGGATAATATGATTAGAAAAATGGAACAAAAAAGAAAAACATATCAACCAGAAAAATTACAGGATGATACAAAAAAGCTGTACCGCATGTTATTAAAATTAAATGCAAATTTAAATATACCTGAATATATTGATGATGATTTAGAATTAAGTGAATTACATCAAGAGCTATTAGTATCATTACAAGATTATACTGATGAACGAAAACTAACTTATGATGAAGAAATAGAACAAGTTAGATTAAAAATGTTTGGTTCTCAGGAGTCAGTATCAGATAAACAAAAATTTATACCTCCTTTACCCTTTAATTTTTGCCTTCCAAAATATAAAAGAAATAATTCTAATACAATTAATGCTACAATAAATATTGAAGAATTTCATCAAACAGAACTTATTATGAAGTTTGAACCTAGTAAAAATGTGACAGAATATCTTGGAGAAGATGTAGAATATCAGTTTGAAAAACTAAAAAAAATTATTACAACAGGTATGAAAAAATCAAAGAAGGTTTATTCAATAAAATGCAAGCCATTTGCAAAATCAGTTTACTTTCTGCAAGCAGAAAATAATGATCATGAACAAAATAATGCATTTGTTCCACCGATTACTAAAGAAGAAATGAAGTATGACTGGGAACTGAATAAAATGGTTCCTAAAAATTCAATTAAAGAAAAAATTAAAGACGACAGTATTTCAGTACCATTAATAGAACCAAATAGAACAACGCTTCAAGCTTATCAAGAAATTTTACTTATTTCTGGAAGGTTTCCTTCTGAATCAACAAATCAAACAAACCGAAATTATAAATTAACATGCAGAGGTCGTGAAGCTTTATATTTATTAAAAAGACGTTATAAACAATTGTTTCATATTCCAACTGGCTTATCAAGAATAGTACCACCGGACACAGTTGATGAAAGTGCATTTTTGCCAGCACTGGAAAAATTACAAAAAAAACAAGTTAAAAGAAAGCGTCTAAGAAAAATGATTAATACAGACAATGATTATTTATATTCTAAATAA
Protein Sequence
MSEDEDNQSLIDEIEALENALDQKRTLSNNDYASTSGIANSNVLKQEIQSAQEIEYCVDEDGDLVIDDIYENYECNDLQDLLELNRKLIETVAISREKVMKLLDECTKKQRLIDDLVSKDVSTWHSKVVSFNAGMPYFKDSKYFTPKQNEDTLTKIRNGELRLAELQRIHRWNQQDKSNLLKAIRHEVTLTLLNKDEPDEAYIDNTITKTSQLPSDVKKAIGSLGSMKFDWLKIANNIPDNKHNAEECEVMWNVFLHPDINKQKWTAKEDKNLNRIVEDYDFEDWDNIAKSLDTKRSGYQCFVRYNTNNWKNLMKGQSWSPIDDRTLIYLVSQLKIGDYIPWGYIAGCMSNWTKQQVYFRWTYSLASHLKKGRFSKEEDKTLLDAVAKHGLNFGKISALVMTNRTSIQLKEHFQTLTARNCNNKKTWTVEEDAVLLNLKKKYGSNWVKIAQEMPNVTRVQARQRYASLVRYEQKGIPLENINRSENPVSPQSNHTTVTYTTNTPWSRENKEIYIKHLKIDDQLIHFFKKDNMIRKMEQKRKTYQPEKLQDDTKKLYRMLLKLNANLNIPEYIDDDLELSELHQELLVSLQDYTDERKLTYDEEIEQVRLKMFGSQESVSDKQKFIPPLPFNFCLPKYKRNNSNTINATINIEEFHQTELIMKFEPSKNVTEYLGEDVEYQFEKLKKIITTGMKKSKKVYSIKCKPFAKSVYFLQAENNDHEQNNAFVPPITKEEMKYDWELNKMVPKNSIKEKIKDDSISVPLIEPNRTTLQAYQEILLISGRFPSESTNQTNRNYKLTCRGREALYLLKRRYKQLFHIPTGLSRIVPPDTVDESAFLPALEKLQKKQVKRKRLRKMINTDNDYLYSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00708470;
90% Identity
-
80% Identity
-