Ekon058773.1
Basic Information
- Insect
- Eupristina koningsbergeri
- Gene Symbol
- mbr-1_1
- Assembly
- GCA_018907245.1
- Location
- JACCHV010001910.1:6021-7449[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5e-13 1.4e-09 39.3 0.1 2 43 147 189 146 190 0.93 2 3 8.4e-15 7.9e-11 43.3 0.0 5 39 301 335 298 339 0.93 3 3 0.046 4.4e+02 2.5 0.0 2 15 358 371 357 376 0.87
Sequence Information
- Coding Sequence
- ATGACCAACGGCGTGCAGCCGAGCAGTGATCGGGAAGAGTCGAGTCCATTGGCTCGCACCAACAGCATCCTGTCTTCCGGCAACGCACACAGTGTGAATTTGCAAACGCTAACTCCCCAGATCCTCAACCTAATCCATCTCGTCCAACAAAATCCTCTGCTGCAGCTTCTTTTGATGCAGTGGAGCCAAAAGCTTAGTCAGGCGAGCGTCGAAAACTCCACCCTACAGATTCAGCATCTTCTCGCTTCGAATCTGGTCAACATTCAACAGTTGTCAGTCAATGATGGCAACTGGCAGCTAGCAAACGAGCACCTGATGCTCGACAACCATGGTCAAACGCAGCAAGGACCGGTGGAGACAGCGAAGATGGAGCTGGATACTGACTCTGACAATGTTGACTTGCCACGTCCGTTGCGTGGAATCAAGCGCTCCTACTCAGAGAAAGAGCTCAACGTGGCAATCAATAAGATCAGGAACGGCGAAATGGGAACCCGACGCGCCTCGGCCATCTACAAAATTCCTCGCTCAACATTGCGCAATAAAATGAATAAAACTCGAGAGTCGGTCACAAGCGCGCAGCATCTGCATTTTGACTCGACTCAACAGCTACCTCAACTATTTGCGCCGAATCAAGAGTCGGACAACATTGACAGTCAGAATATCACTAGATCAGCCCTTGCTCCAATTAAAGCAGAAGTGTTGCCGACCAATGACATGCCACAACCTCAGAACATGGATCTGCTTTTCTGTCTCGTGAACTCAATGCAGCCGAGTCAGTTTCAAAACGCTGGTCGTTTATCTGGCTTTCAATTGCCGCTGTCGAGTCCGTTCAACAACTTGCTGAACCAGAAGCCGGCGCGAGGCAAGCGCGGCCAATATCGTCGCTACGACAAAAGCTCGCTGGACAATGCAGTTAAGGCCGTCAAAGAGGGTATGTCGGTGCACAAAGCGGGCACAATATACGGCGTTCCGCATTCTACACTCGAGTACAAAGTGAAGGACAGATCGCGCAAGGGTCAGCAGCAGCGTCTGGAAACCGAGCTCAAACGACAACAGAAGCTGATCACGCAAGAAGACGGCTTGAGCCAGGCTCTTGACGCTTGCGCTAATGGGTTACCGGTCGATAAGCCATCCAGCTCAAAGGATTAG
- Protein Sequence
- MTNGVQPSSDREESSPLARTNSILSSGNAHSVNLQTLTPQILNLIHLVQQNPLLQLLLMQWSQKLSQASVENSTLQIQHLLASNLVNIQQLSVNDGNWQLANEHLMLDNHGQTQQGPVETAKMELDTDSDNVDLPRPLRGIKRSYSEKELNVAINKIRNGEMGTRRASAIYKIPRSTLRNKMNKTRESVTSAQHLHFDSTQQLPQLFAPNQESDNIDSQNITRSALAPIKAEVLPTNDMPQPQNMDLLFCLVNSMQPSQFQNAGRLSGFQLPLSSPFNNLLNQKPARGKRGQYRRYDKSSLDNAVKAVKEGMSVHKAGTIYGVPHSTLEYKVKDRSRKGQQQRLETELKRQQKLITQEDGLSQALDACANGLPVDKPSSSKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -