Basic Information

Gene Symbol
Xbp1
Assembly
GCA_018907245.1
Location
JACCHV010002904.1:5423434-5425525[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 4.3 1.6e+04 -2.2 0.0 41 57 76 92 71 95 0.62
2 4 5.3e-13 2e-09 39.2 13.5 2 61 99 158 99 162 0.93
3 4 0.038 1.4e+02 4.4 0.3 33 55 144 166 141 168 0.80
4 4 1.3 4.9e+03 -0.6 0.5 35 50 230 245 227 257 0.80

Sequence Information

Coding Sequence
ATGAGCGCACTGAAAAGCGTCATCATTACCTTGCCTTCCAAAGGCTTGGCCAGCGGTAAGACAAACATTCAGAGCATCGCCAACAGCGATATGACTAAATCCGTCTCCAAACTCAATTTCACCACCTCCATCCTGATGGACAAGATCAAGTTGGAGAACAGCAGCAAGAGTATTTCCTCGGTTAAACATATGGAGCTCGACCTGCCCGTGTCTTATGCAGCAGATAACATGGTCTTTAAGCAGGAGAACGGAACGTTACGGGGAAAGAAGCGAAGGCTTGATCATCTCACTTGGGAAGAGAAACTCCAAAGAAAAAAACTAAAAAATAGAGTAGCAGCACAAACATCTCGAGATCGTAAAAAAGCTAAACTTGATGAATTGGAAGAGACAGTAAGGCTTCTAAAGGAAAAAAATGAAATTCTAATAGAAGAATGCACGATGTTAAGAACACAAAATGAAATGCTTATTTCTGAAACAAAAAGGCTAAAACAGGAGAAAGAGTTTTCAAATGACAAGGAATCAAAAGAGCAGGCGTGCACAAGTTGTCAAGCTTGTGTCAGTTGGTGGAACAGTACAAACGGCACAATCTCTGACACTGAAACCAAGCGCTACCATACTCCTGAAGATACTGACTCTCTACCTCCTCTCGAAGATCTATTCGGTGAATTCCAAGCAGACAATTACATCGAACGACTTGAAGAACTTGCCGAAAGCCTTCTGCGAGAAGTTACCTCTGAAGTGGAAGCAAATTCTACTTCATCAAATGAACAGGACACAATTAAACAAGAAAATGCCCATCAAGAATTTGACACTAGAGAAAAAATGGTGGGGAAGACATCAAGTTATGTGGAAGCCAATACATCCTGTGGAAGCATAACAACAAATAATACTCAGTTGTCAGATAGCATTTGTGACAGTACCTCTGTTTCGTTGATGCCGAGAATCTCCTCTAATGCACCTAGTTCAATCACCATAGCTAAAAAGCTCGAGATCAAAGAAGAACCCATACACGACGCGGAAATGGTATACGGCACTTATGATGAAGCTACTAACTGTATTACAATTATTTATCCCGAAGAAGAGATGACGCCTCTTACGCCAAGAGAACAAGGGCAACTCGGGCTCCAGCTGGAATCGCCTTCACATTCATACGACTCCATGTCGCCTACGAGTGTACATTCTGAAGACATAGAGCCTGATCCCTTGGCATCCGAAAAATTAGACTGCATACAATCAGACGGAGGATACGAATCGCATGGGTCACCTGCGAGTTCTGTCAGTGGCACCAATAATACCCTCGCAGATCTTTGGCACGAGAGCTTCTCCGAGCTATTTCCTAGCCTTGCCTGA
Protein Sequence
MSALKSVIITLPSKGLASGKTNIQSIANSDMTKSVSKLNFTTSILMDKIKLENSSKSISSVKHMELDLPVSYAADNMVFKQENGTLRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRLLKEKNEILIEECTMLRTQNEMLISETKRLKQEKEFSNDKESKEQACTSCQACVSWWNSTNGTISDTETKRYHTPEDTDSLPPLEDLFGEFQADNYIERLEELAESLLREVTSEVEANSTSSNEQDTIKQENAHQEFDTREKMVGKTSSYVEANTSCGSITTNNTQLSDSICDSTSVSLMPRISSNAPSSITIAKKLEIKEEPIHDAEMVYGTYDEATNCITIIYPEEEMTPLTPREQGQLGLQLESPSHSYDSMSPTSVHSEDIEPDPLASEKLDCIQSDGGYESHGSPASSVSGTNNTLADLWHESFSELFPSLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-