Equa032300.1
Basic Information
- Insect
- Euplagia quadripunctaria
- Gene Symbol
- THAP3
- Assembly
- GCA_963859945.1
- Location
- OY982589.1:5584178-5606700[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.44 44 5.8 0.3 1 23 365 387 365 387 0.97 2 11 0.0033 0.33 12.4 8.8 1 23 394 416 394 417 0.94 3 11 0.36 36 6.0 3.2 1 23 421 443 421 443 0.97 4 11 5.2 5.2e+02 2.4 6.4 1 23 448 471 448 471 0.94 5 11 0.0012 0.12 13.8 0.2 1 23 475 498 475 498 0.94 6 11 5.1 5.2e+02 2.4 0.2 3 20 512 529 511 531 0.85 7 11 0.31 31 6.2 0.4 2 23 591 613 590 613 0.95 8 11 0.011 1.1 10.8 0.6 2 20 629 647 628 650 0.91 9 11 2.6e-05 0.0026 19.1 1.4 1 23 656 678 656 678 0.99 10 11 4.5e-05 0.0046 18.3 4.5 1 23 685 707 685 707 0.97 11 11 3.8e-05 0.0038 18.6 1.3 1 23 713 736 713 736 0.95
Sequence Information
- Coding Sequence
- atGAGGTGCTGCGTGCCTTACTGCAAGAATGATTCAAGACATATATCTAAATCTCAGGGAATTACGTTTCATGTCTTCCCAAATGAGCCATCATTACGTACAGCCTGGTTGAAGGCTCTGGCTAAAGAAGATTGGGAGCCCAAAGAGCGCAGTGCGGTTTGTTCAGAGCACTTTCTCTGTGAGGATTTGTATGAGACAAAGAGTGGGCTGAGGAAAGTGAGAGTTGGAGCTGTGCCACTAATACTGCAGGATTCAGAAAATATGTGCGACTATGGAGAGCCTGCTAGTTTGAAGGTATGCAGAATTTGCTTAGCAATGGACTCGAAGTTGTTTCCTATAACAATTTACAAGTTGGAACAGGCGTATGAACATTTAACTGGAATATCGttgCAAGCCGAAGACCGTCTACCGCAGAAGCTATGCGTGGAGTGCGCGCAAAGGCTGCTGAACTGCAGCCGCTTTAGGTACAGAACACTGCGAGCCAACTCCCTCATGATGGAGATAGTGAAGAAACAGGAACACctgaCTATCCAcaatattaaatcaattaaCCGCGAAAACAACCATCTCAACTCACCATTGTCGCCAAAACACTTTTCACCGGACCATTGCGATAGCTACTTCGCAGAAAACTTAATAGAACCGCCAGTCATACAAGAAGAAAAACATCCAACCCCTCCAGAAATTGTAGAAATAAAACCGGaaaattacatatttctaaCGGAAGATGTTGGAAAACGTAATGCCCCAGGAGGAGATATCGATAAGAACCACGAAAATGACAGTTTAGAAGAATTCGACAGAGACTTTGTTATAGTAACCGATCAAAATTATTCATCAGATGACAGTTTACCGTTACAGAAGTGCAAAGCGAAAAagttaaagaagaagaagaaggttAAAGTCAAGAAGCCGATGAAGAGAGTGAAGAAAGTGAAAGAGCCTGCGGAACCGAAGATTGACAGAAGAAGAAAACCGTTTTTGAACGATGACTTGAATGAGACTCTGTTCACTATTACTGATTTGAGTTTCGACGAACaaatagctgaaatattgaaGAGACAAGAAAGCTCAAACTATAAGAATGCTGTGTTTAAGTGTACGGCGTGCTTTAAAGGGTTCCTAGACGAAGATGCGTACAATAGTCACGTTATTAGACATACCAATCAATCCGGTGAACACGAGTGTGAAATTTGCAAGACACACTTCAAACACCCGCACGCTCTGAGGAAGCACATCACCGCCCATCACACGCAGAGGTTCAGCTGTAAGCAGTGCACGTACGTCaccacacacagacagacggccAGATTACATGAGAGatggCATAATGGCACTAAGTACAGTTGTCCACATTGTCACCATGAATTTctTAAATTTACAACTTACATGGGACACATACGGATCAAACACCCGTCGGACTTCGTGTGCGAGATATGCGGGTACTCTTTCGTCAGTGCGAAAGGGATAGAACTACACAAGAAACTAAAGCACAGATTAGATAATGCTCAGATACCAGAGGACGGTCCGTTCTGCGAGATGTGTAATGTACGGTTCGTGTCAGTCGAAGCTCACAAACGACATCTGAGCGTGTCCGGGAGACATAACACAGACACAGATAAAGATGGCCGGGAGTCAAACAAACCGAAGAAGGGGAGAAAGTCAAAAGAGTCGCAAGAGATCGAAAGGAGATCGAGGGAGATGGAGAAAGAGACTGATGACAAGAAAAAGATGTATCCGAGTCAGATAAGGAAAGCCGAGGGACCTATACCTTGTGAGCAATGCGGCCTTCAGTTGGAAGATTCCAGAGCTTACCACAGCCACTTCAGACGAGTGCATCCGGATAAGAATCGCACCAACTACCCTTCGATGAAGTCACCTTGCATGTGTGAAGTGTGCGGCAGAATGTTCCAGAGCTACGCGCTCCTCAAGGACCACACGTGGGTCCACACGGGCGAGCGCCCGTTCAAGTGCGACAGTTGCGGCAAGTCGTTCCGCATGAAGCAGCGCCTCGTGGCGCACCGGCGCGTGCACAGCCAGGTGCGCGCCAGCTACGTGTGCGCGCTGTGCGGGAAGCACTTCAGCACGCACAGCAACAGGCAGCGGCATATGTTTATCCACACGGGTTTGAAGCCTTTCAAATGTGAAATGTGTGGGAAGGGCTTCAAGCACGCGAGCGAGAAGAGAGCTCACATTACATATGTTCATCTGAAGAAGCCTTGGCCAAAGCGAGCCAGAGGAAAGAGAAGACCTGATACTAGACAGGGTCAGCTGCTTCCTCACCAGGGTCAGACAGACAACGAGATGGACCTCTCAACACCAATTTGGCCTCAGTGTGACCCCAAACTGGGTGATATTAATGATATGATAGTTGATAAGCCAGTTTATTACAACTTGaagatatag
- Protein Sequence
- MRCCVPYCKNDSRHISKSQGITFHVFPNEPSLRTAWLKALAKEDWEPKERSAVCSEHFLCEDLYETKSGLRKVRVGAVPLILQDSENMCDYGEPASLKVCRICLAMDSKLFPITIYKLEQAYEHLTGISLQAEDRLPQKLCVECAQRLLNCSRFRYRTLRANSLMMEIVKKQEHLTIHNIKSINRENNHLNSPLSPKHFSPDHCDSYFAENLIEPPVIQEEKHPTPPEIVEIKPENYIFLTEDVGKRNAPGGDIDKNHENDSLEEFDRDFVIVTDQNYSSDDSLPLQKCKAKKLKKKKKVKVKKPMKRVKKVKEPAEPKIDRRRKPFLNDDLNETLFTITDLSFDEQIAEILKRQESSNYKNAVFKCTACFKGFLDEDAYNSHVIRHTNQSGEHECEICKTHFKHPHALRKHITAHHTQRFSCKQCTYVTTHRQTARLHERWHNGTKYSCPHCHHEFLKFTTYMGHIRIKHPSDFVCEICGYSFVSAKGIELHKKLKHRLDNAQIPEDGPFCEMCNVRFVSVEAHKRHLSVSGRHNTDTDKDGRESNKPKKGRKSKESQEIERRSREMEKETDDKKKMYPSQIRKAEGPIPCEQCGLQLEDSRAYHSHFRRVHPDKNRTNYPSMKSPCMCEVCGRMFQSYALLKDHTWVHTGERPFKCDSCGKSFRMKQRLVAHRRVHSQVRASYVCALCGKHFSTHSNRQRHMFIHTGLKPFKCEMCGKGFKHASEKRAHITYVHLKKPWPKRARGKRRPDTRQGQLLPHQGQTDNEMDLSTPIWPQCDPKLGDINDMIVDKPVYYNLKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167152;
- 90% Identity
- iTF_00707029; iTF_00823106; iTF_01197799; iTF_00823478; iTF_01198174; iTF_01502157; iTF_01502470; iTF_00157273; iTF_00157607;
- 80% Identity
- iTF_00707029;