Basic Information

Insect: Euplagia quadripunctaria
Gene Symbol: -
Assembly: GCA_963859945.1
Location: OY982572.1:3801580-3811407[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.2 2.2e+02 3.6 1.2 1 23 361 383 361 383 0.95

2 11 0.029 2.9 9.5 0.4 2 23 391 413 390 413 0.95

3 11 0.00086 0.086 14.3 0.6 1 23 417 439 417 439 0.97

4 11 0.017 1.7 10.2 0.2 1 23 444 466 444 466 0.99

5 11 0.0063 0.63 11.6 0.2 1 23 475 498 475 498 0.96

6 11 0.25 25 6.5 0.1 1 22 510 531 510 535 0.92

7 11 0.0077 0.77 11.3 1.1 2 23 554 576 554 576 0.95

8 11 0.00095 0.095 14.2 2.2 2 23 629 650 629 650 0.97

9 11 0.00066 0.066 14.7 0.1 2 23 656 677 655 677 0.97

10 11 1.9e-06 0.00019 22.7 1.3 1 23 683 705 683 705 0.99

11 11 6.8e-07 6.8e-05 24.1 1.0 1 23 711 734 711 734 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.2	2.2e+02	3.6	1.2	1	23	361	383	361	383	0.95
2	11	0.029	2.9	9.5	0.4	2	23	391	413	390	413	0.95
3	11	0.00086	0.086	14.3	0.6	1	23	417	439	417	439	0.97
4	11	0.017	1.7	10.2	0.2	1	23	444	466	444	466	0.99
5	11	0.0063	0.63	11.6	0.2	1	23	475	498	475	498	0.96
6	11	0.25	25	6.5	0.1	1	22	510	531	510	535	0.92
7	11	0.0077	0.77	11.3	1.1	2	23	554	576	554	576	0.95
8	11	0.00095	0.095	14.2	2.2	2	23	629	650	629	650	0.97
9	11	0.00066	0.066	14.7	0.1	2	23	656	677	655	677	0.97
10	11	1.9e-06	0.00019	22.7	1.3	1	23	683	705	683	705	0.99
11	11	6.8e-07	6.8e-05	24.1	1.0	1	23	711	734	711	734	0.98

Sequence Information

Coding Sequence: ATGGTTTCGTATTGCTGTGTGAAAGGTTGCAGTAACAACAGCAATCATAAGAAGAAAGATCCCAATACTTTAATCTCATTTCATGCTTTTCCATGCAATCAAGAGCTCAAAACAAAATGGTTAagagccataggacgtccaaaTTGGGTGCCTCCTAGTCATGCCCGTATCTGTAGTACCCATTTCAACCATGATCAGATTAATTATGAAGGATGTCGAATAAGAATTAAAGATGATGCTACACCTCTCAATTGTTTACCTGTAAACTCCAATTTTGAAGCAACAAATGTAGAAGCATGCAGAATTTGCCTGGCAACAGATATGAAGTTATACAACTTAGGAGACAATAAGTTGAGCACCTGTCTGGACTCTGTTATTGGATTCAAcGAAAATTACAATATAGGAGGTCTACCACAATATGTATGCTACCAGTGTGCTGCCTGTTTGATTAAATGTAACAGACTTGTAGAGAAAAGTATGATAGCTCAAGCAACACTGTTGGATATCTTTGCAAGAAATGGTCAgATAACCACAAGTCTAATAAAACagcaaaatagaaataaattgaatttaaactcACCACTAAATTGTCACTCAATCAAAGACTATTATTACTACAAACAtgatgaaaataatagtttagagAAAACATCTCTACATTGTAttgatacttatttaaaaaacgaaaatgatgatgatgacattcAATCCGATTTTAAAGCTGATACaaagaatgaaagaaaattatgtaaaatggagttaaaagaaaataagctaaatgaagaaataaataatttaaatgacaaCCATTTAGATTCTTATATGGACAGTCCAATCGCGAATTCTGTATCTGATGAAGAGATAAGTGAAGAGAATATAAAGTATAGAATTTTGAAAAAGcGAGTTAAATCTGAAGACAGGCCAGttcgaaaaaaacttaaaagaaacaaaGCCAATGGTCTAACTCCAGACGAAACAGACATGCAGACATACTTCGATGTGGTGAAATTATCgTTGCAGGAACAGATAGAAGAATGGAAAAGAGCAACAGTGAGAAGAACTCTGACTAGTGAAGCTGTATATGAATGTGAGGCATGCTGCAAAATATTCGCTCATGTTAACAGTTACCGTGTGCACCTCGCCGGTCACGACCCGGCCCGAGGTAAAGTCGAGTGTCAAATCTGTAAACTGCGCTTCAAAAACGATGTCCTTGTGAAATCACATACCAACCGTGCCCACGCCAAGAAGTTCTACTGCAAGACATGCCCGAAGGTATTCAATAACGTCGGCGTAGCCAAGAAACATCAGCGTTGGCATTCAGGCTACAGATACAAATGTGCGTCGTGCCCCTTCACAACGGTGCACGAGTCTGCGCTAGGGGTGCACGTGCGGGTGCACGTGCGTGGCGCGCACGCGCTCGCGCACACGTGCGCGGTGTGCGGCCGGCCCTGCGCCAGCCGCCGCGGGCTCGCGCTGCACGTGGCCACCGCGCATCGCGGTGTCAAGGACACAGATTTGACGAAAGCGTATCGGTGCGAAGCATGTGATATCAACTTCGTGTCGGAAGGAGCCAGGCGGGTACACTTACTGACCTCCAGCCAACACAGGAACAAGTCTAACCTTTGCGATCCTTCAAGTCAATCAGCAGAGCTTCGCAATACATGCAGCAAGTGCGGTGTAAAATGTTCGTCGTTCAGTGAGTTAGTATCACACGCAAGGGCCGAACACCCGCGTGTCAACAGGAAAAAATGGCGGGTACTAGACAGCTATCCAACACAGTGTGAACTTTGTGATGAAACGGTAACCTGTCGACGGAAACATTGGCAGCACGTACGCAGGCAACACCCAAAGGAGATTGATACCTACCGTCCCGTGGTCACGGCTGTATGTGACACCTGTGGAAAAGGGTTCCAGAATTCAACTAAACTCCACCTTCATCAACTAAGACATCGTGCGCCTACAGTTCGGTGCGAAACTTGTCCTCGGCTATTTTATGACAAATACGCTTTAGCTCGCCACGCGATCACACACAAAACGAATAAACCATATCAATGTCGCACCTGCGGAAGAGCATTCAAATTGCGTAGCAATTTAGAGCGGCATTCGAGGGTACACTCAGATATTGCTCCATATGAATGCACGATGTGtggtaaaaagtttaaatactcGTCAAGCGTAAACTTGCACATTCGCACCGTGCACTACAAATTACCGCATCCACCTAGAAAGAAGAGGAACAAATTGGTGAAAAGTGGTGTCAGCCATAATGACTTGTGa
Protein Sequence: MVSYCCVKGCSNNSNHKKKDPNTLISFHAFPCNQELKTKWLRAIGRPNWVPPSHARICSTHFNHDQINYEGCRIRIKDDATPLNCLPVNSNFEATNVEACRICLATDMKLYNLGDNKLSTCLDSVIGFNENYNIGGLPQYVCYQCAACLIKCNRLVEKSMIAQATLLDIFARNGQITTSLIKQQNRNKLNLNSPLNCHSIKDYYYYKHDENNSLEKTSLHCIDTYLKNENDDDDIQSDFKADTKNERKLCKMELKENKLNEEINNLNDNHLDSYMDSPIANSVSDEEISEENIKYRILKKRVKSEDRPVRKKLKRNKANGLTPDETDMQTYFDVVKLSLQEQIEEWKRATVRRTLTSEAVYECEACCKIFAHVNSYRVHLAGHDPARGKVECQICKLRFKNDVLVKSHTNRAHAKKFYCKTCPKVFNNVGVAKKHQRWHSGYRYKCASCPFTTVHESALGVHVRVHVRGAHALAHTCAVCGRPCASRRGLALHVATAHRGVKDTDLTKAYRCEACDINFVSEGARRVHLLTSSQHRNKSNLCDPSSQSAELRNTCSKCGVKCSSFSELVSHARAEHPRVNRKKWRVLDSYPTQCELCDETVTCRRKHWQHVRRQHPKEIDTYRPVVTAVCDTCGKGFQNSTKLHLHQLRHRAPTVRCETCPRLFYDKYALARHAITHKTNKPYQCRTCGRAFKLRSNLERHSRVHSDIAPYECTMCGKKFKYSSSVNLHIRTVHYKLPHPPRKKRNKLVKSGVSHNDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01502154;
90% Identity: iTF_00707030;
80% Identity: iTF_00707030;