Basic Information

Gene Symbol
zfy1
Assembly
GCA_963859945.1
Location
OY982589.1:2261685-2277820[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.002 0.2 13.1 0.4 1 23 230 252 230 252 0.98
2 11 0.015 1.5 10.4 1.4 1 23 259 281 259 281 0.98
3 11 0.27 27 6.4 1.8 1 23 285 308 285 308 0.92
4 11 0.036 3.6 9.2 1.7 1 23 315 338 315 338 0.97
5 11 0.00052 0.052 15.0 4.0 1 23 344 366 344 366 0.97
6 11 0.0014 0.14 13.6 1.7 2 23 373 395 372 395 0.92
7 11 0.0045 0.45 12.0 1.1 1 21 400 420 400 425 0.92
8 11 2.8e-05 0.0028 19.0 1.1 1 23 433 456 433 456 0.98
9 11 0.023 2.3 9.8 1.3 1 20 462 481 462 485 0.93
10 11 0.00011 0.011 17.0 3.1 2 23 494 515 494 515 0.97
11 11 0.013 1.3 10.5 0.2 6 23 525 542 523 542 0.96

Sequence Information

Coding Sequence
ATGACTGAATGCAATAGTTCTAATAGTTATTATAGCAAAAGTACGTGCCGGGCTTGCCTCAAAGTAACAGAAGAAGTGTTTCCAATGTCAACTGAGGAAATAAACGCGTATCAGAATTTCGCCGACAAGaTTAACGCAAATGAATTTGACATGGTGCTCTGTTTAATATGCAAATGGCTGCTAAATAAATGTATCAAGTTTATCTCACAAGTACAGAAAGCAAGTCAGATATTGAATCAGGTTTCAGAAATGGACTCAAAAACATTCTTACATATTCAACTAAGTAACTACGATATTAGAACTATGGCGCCTGTTATAGTCTACATTGGCCCAGAAGTAGACATAGAAAATGAAACTGAAGAGTATATGGCTGAAGATAATCtagaagatgatgatgagataCCGCTAGTGATGTTACAAGATTTCAAAAGCaagaagagaaagaaaaaagaagagCTGACAGTAGAGACTGCTATAAAACAAGAACAAGAAATGAAAGTTGAATCTGACAGTCTAGAAGACAAGTCTTGTAACAAGAGAGCGAGAAAGAAGAAAGAGATGAGAGAAGGATTCACTTCTAGAATGAGACAAGAGACTGATGaatatatagttattaaattGACTGCTGATCAGGTGCGGCAAGAGCTAAAGGAGAAAGCAAAAACAGAGCCTTATTTACGGGCTCCTTTCAAATGTGACAATTGCGTCAAAGGGTTTAACTTTGAAGACGTACTGTTAAGTCACATGGAGAAACATAGACTGgaaCATGGGTCTTTTCAATGCAACATATGTACACAATATTGtccaagcattgtttcactgagAGGGCATTTGAAATCACATACTACAAGGTATAAATGCAAGCTGTGCGGTCAAGTTCGTCTCTCACGCCAACATTTACTAGAACATTACACAATTAGTCACACATCGGCGCCTATTACCTACAGCTGTGATAAATGCGACTTTACTACcaaTAAACGCACAGTGATTCAGCGCCACGTTCGATCCCAACATGGCGCCGGCGAGAGACACTCGTGTCACACTTGCGGGAAACTGTTCAATACTATTGAGAGTCTCCGGGTACATACTATGCGCCACGACAAGACGAAACGGCTCCACTGCGATCGTTgcgacaaatattttatatatccgTCTCTCTTACACAAACATGTTCAGGCCGTGCACGAAAAGAGAGAGTACTATTGTGTGGAGTgtgatataaaattcaaatcacCGGAAAGTATGAGACTACATTTTAAGAAAGCAAAAAAGCACCGAGACGATTCAtcttataaGTATGAGTGTCCTCATTGCAGTGAGCGGTTCGTGTCCACGTCTACGCTGTCTGTACATTTGAGCACCAGCCACGGGGAGGCGAAGCAACATGTCTGCGATATGTGTAACAACCATTATAGCAGTAAGGAGTCTCTAAGAGGGCATATATGGAGGGTCCACAATCAAAAGAGGGAGCCTCCGGCTAGCTGTCACCTGTGCGAGAAAAGTTTCACGCGGAAGAGCATCCTGAAGGTCCATGTGAGGAGTCACACTGGTGAGAGACCATACATGTGTAGCTGTGGCGCGGCTTTCACTCAGAAAGCGAGCCTGAAGGTGCATGCAGCTAGACATACGCAGGTAACTGCTTTGTAA
Protein Sequence
MTECNSSNSYYSKSTCRACLKVTEEVFPMSTEEINAYQNFADKINANEFDMVLCLICKWLLNKCIKFISQVQKASQILNQVSEMDSKTFLHIQLSNYDIRTMAPVIVYIGPEVDIENETEEYMAEDNLEDDDEIPLVMLQDFKSKKRKKKEELTVETAIKQEQEMKVESDSLEDKSCNKRARKKKEMREGFTSRMRQETDEYIVIKLTADQVRQELKEKAKTEPYLRAPFKCDNCVKGFNFEDVLLSHMEKHRLEHGSFQCNICTQYCPSIVSLRGHLKSHTTRYKCKLCGQVRLSRQHLLEHYTISHTSAPITYSCDKCDFTTNKRTVIQRHVRSQHGAGERHSCHTCGKLFNTIESLRVHTMRHDKTKRLHCDRCDKYFIYPSLLHKHVQAVHEKREYYCVECDIKFKSPESMRLHFKKAKKHRDDSSYKYECPHCSERFVSTSTLSVHLSTSHGEAKQHVCDMCNNHYSSKESLRGHIWRVHNQKREPPASCHLCEKSFTRKSILKVHVRSHTGERPYMCSCGAAFTQKASLKVHAARHTQVTAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00824197;
90% Identity
iTF_00823407;
80% Identity
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