Basic Information

Insect: Euplagia quadripunctaria
Gene Symbol: -
Assembly: GCA_963859945.1
Location: OY982586.1:5505905-5510109[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.34 34 6.1 0.4 1 23 257 279 257 279 0.95

2 10 0.24 24 6.6 0.1 2 23 306 328 305 328 0.93

3 10 0.00098 0.098 14.1 0.6 1 23 351 373 351 373 0.98

4 10 4.2e-06 0.00042 21.6 0.5 1 23 377 400 377 400 0.98

5 10 0.0044 0.44 12.0 3.2 1 23 405 428 405 428 0.96

6 10 0.06 6 8.5 1.5 1 23 434 457 434 457 0.90

7 10 3.1e-07 3.1e-05 25.1 2.7 1 23 464 487 464 487 0.98

8 10 0.0013 0.13 13.7 3.8 1 23 493 515 493 515 0.98

9 10 6.3e-07 6.3e-05 24.2 1.0 1 23 521 543 521 543 0.99

10 10 8.8e-05 0.0088 17.4 2.1 1 23 549 571 549 572 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.34	34	6.1	0.4	1	23	257	279	257	279	0.95
2	10	0.24	24	6.6	0.1	2	23	306	328	305	328	0.93
3	10	0.00098	0.098	14.1	0.6	1	23	351	373	351	373	0.98
4	10	4.2e-06	0.00042	21.6	0.5	1	23	377	400	377	400	0.98
5	10	0.0044	0.44	12.0	3.2	1	23	405	428	405	428	0.96
6	10	0.06	6	8.5	1.5	1	23	434	457	434	457	0.90
7	10	3.1e-07	3.1e-05	25.1	2.7	1	23	464	487	464	487	0.98
8	10	0.0013	0.13	13.7	3.8	1	23	493	515	493	515	0.98
9	10	6.3e-07	6.3e-05	24.2	1.0	1	23	521	543	521	543	0.99
10	10	8.8e-05	0.0088	17.4	2.1	1	23	549	571	549	572	0.95

Sequence Information

Coding Sequence: ATGCAAACAGAAAATCAAAGTAATATAACATATGGGCAGTGTCGCTGCTGTTTAGCTCGAGGCCATCATCGATATTTGATGAAAGAATACTTCTTTAACGGCATACGAGAAGTGtatagtgaaatattttttgaaatctttaatttattaCTCTCCAACAACACACAATTGACCACACTAATATGTACAACATGTATTCAACGATTGCGCGATGCTACGAGTTTTCGAATGATGGTAGTCAGCACCGAGAGGCAGCTACTAGAAGGAATCACAATAGGAAAAGGAAAAAACACTGAGTTTATCGATGTCCTGGATGAGGATACTTCGGACATCCCAGGGATTGTAAAGATGGACTTGCAACAGGAAGTAAATCAGGAAACAGTTGACTGTCGTACTGCACTTGACAATGCAGACTACGGTCTTGACTTTAGTGATTACCTGTCAGACAGTCAATGCGAGGACAGTGTTGAGAGTTTGGTGGACGGTGAGGCGGCACTGCTGGCGAGATTCAAGGAAGTGGCGCCCCTCCCGACTAGGGCTTCCCTACCCAGTTTGTGTCCAGAGTACTGCAAGCAGCTTCAGATGTTTAAagATACAAAAGTTGTTCCACAAACAATATCCAGACTGGTAGAAGATTACGAGTTCATACGGGAGACCAGAAATGTCCGCCGCCAATACGTCACAGAGAAACTAGCTCACATCGTCAACGCAACAACTATTCTAGAATGTTCAAACGTCACTCCCTTCAGAAGCAAAAGCCGGCAAGGTTTTCCCTGCTTCTACTGCAGAAACATCTTCGAATCGATCGATAGACTTCAAGAACACACCGCTCAACACAAAACGCATGAAATACTCAAAGTCCTAAGAACTTATGGAGCAGAATCTTTAGTAGTATACGTAGATATCACAGATctgaaatgtaaaatatgtacccAGGAAATGCCAAATCTGAACGAGTTGAAActacatttaattaatgtacacaaaaagaaaatgcaTCTAGATGTCACTGATAGAATTATACCATATAAACTATCCGATAGTGGAATGTATGAATGTCAAATGTGCGGTTGTAATTATGAGACTTTTGGCGCCATTGAACGTCATATGAACGTACATTTTAGGAACTATGTTTGTAAAGATTGTGGTACAGGCTTTGTCACAAGATATAGACTTAAAGTACATATTAAAAGTATGCATACTGGTGGGACACATCCTTGTCAGGTTTGTGGGAAAATATTCTCGACAAATCAGAAGCATAAAAATCATGTCAACACAGTTCATAAGTTAATGAAACGatttaaatgtacaaaatgTCCTGAACGCTTCGCTGAGTACTTCAGACGGCAGAAGCATATGGTACAAGTACACGGACTAGCCCCGTTGAGGTACAAATGTAATGTTTGTGAAAAAAGCTTTGATAGACGGTACACTTTATCGAGGCATATGAAACGCGATCATTTAGAAGAGCGCGATTTTCAATGTGAGTTATGTTCATATAAGTGTTTCACAAAGAATGAATTGAGAGTGCACATGATTAAACATAATGGCGAGCGTATTTACGAATGCTCGGTGTGTAAGAAGGCCTACGCTAGGAAGAAAACTTTGAAAGAACATATGCGTATACATAATAATGATAGGAGGTTTGCTTGTGCTGTGTGCGGACAGGCATTTGTACAGAAGTGCAGTCTTAAAGGCCATTTGAAGACACATCATCTTGAAtttagtatgtaa
Protein Sequence: MQTENQSNITYGQCRCCLARGHHRYLMKEYFFNGIREVYSEIFFEIFNLLLSNNTQLTTLICTTCIQRLRDATSFRMMVVSTERQLLEGITIGKGKNTEFIDVLDEDTSDIPGIVKMDLQQEVNQETVDCRTALDNADYGLDFSDYLSDSQCEDSVESLVDGEAALLARFKEVAPLPTRASLPSLCPEYCKQLQMFKDTKVVPQTISRLVEDYEFIRETRNVRRQYVTEKLAHIVNATTILECSNVTPFRSKSRQGFPCFYCRNIFESIDRLQEHTAQHKTHEILKVLRTYGAESLVVYVDITDLKCKICTQEMPNLNELKLHLINVHKKKMHLDVTDRIIPYKLSDSGMYECQMCGCNYETFGAIERHMNVHFRNYVCKDCGTGFVTRYRLKVHIKSMHTGGTHPCQVCGKIFSTNQKHKNHVNTVHKLMKRFKCTKCPERFAEYFRRQKHMVQVHGLAPLRYKCNVCEKSFDRRYTLSRHMKRDHLEERDFQCELCSYKCFTKNELRVHMIKHNGERIYECSVCKKAYARKKTLKEHMRIHNNDRRFACAVCGQAFVQKCSLKGHLKTHHLEFSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00157476; iTF_00405308; iTF_00638000; iTF_00909140; iTF_00636796; iTF_01166999; iTF_01502365;
90% Identity: -
80% Identity: -