Equa029885.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Euplagia quadripunctaria
Gene Symbol
-
Assembly
GCA_963859945.1
Location
OY982586.1:5668980-5682699[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.028 2.8 9.5 1.1 1 23 235 257 235 257 0.96
2 16 0.034 3.4 9.2 0.0 3 23 287 308 285 308 0.94
3 16 0.19 19 6.9 0.2 5 23 332 351 328 351 0.92
4 16 0.00034 0.034 15.6 2.6 2 23 357 379 356 379 0.95
5 16 0.0017 0.17 13.3 0.7 1 23 384 407 384 407 0.96
6 16 0.44 44 5.8 0.5 2 23 410 432 409 432 0.92
7 16 0.18 18 7.0 2.0 2 21 439 458 438 459 0.92
8 16 0.0054 0.55 11.8 0.6 1 23 519 542 519 542 0.90
9 16 0.033 3.3 9.3 0.1 3 23 571 592 569 592 0.94
10 16 0.039 4 9.1 0.2 3 23 616 638 614 638 0.94
11 16 0.00056 0.056 14.9 0.6 3 20 645 662 643 666 0.90
12 16 0.0086 0.86 11.1 0.3 1 23 671 694 671 694 0.97
13 16 0.00038 0.038 15.4 0.2 2 23 700 722 700 722 0.94
14 16 0.00013 0.013 16.8 4.7 1 23 726 749 726 749 0.97
15 16 0.00018 0.018 16.4 0.6 2 23 756 777 755 777 0.96
16 16 0.0056 0.56 11.7 3.3 1 23 783 805 783 805 0.97

Sequence Information

Coding Sequence
ATGGAGTTTGACGAGATTGTGGTGAAGGAGAGCCCGGGGCTATGCCGGTGCTGTCTTTCAGAAGGATGCTACAAAGACTTGGGATCTGAGTACACTTGGATGAATGAGACTGAGGTTTATGCTGATATGCTGCTTGAATGTTTTGATATTAGCATAACCCAACACAATGAAGGCCCAAATGGACCCAATCGCCTCATTTGTGAAGTATGCATCACACGTTTGCGAGATGCTTGCAATTTCAAGAAACAAGTGCTGGACTctgaaaaaaagtttattgacATGTTGGGTCGAGGAGAGTTTAGGCCTAAGATGCTTATCTACCAAAcacaaatgaaatgtgaagacCCAGTAGTGGATGCACCTGCTGAGGAGACGGAAGTGGAATATTTAGACGATGACATTGACTTTGCCGATGATGCAGAAGAATTGAAAGACGAGTCAGAGCCTACAGTTTCTGACATCACAGTCAGTTCCTTACCGATTAAGGGCAAAAGAGGCAGACCCAAGAAGACTGTTGTTAAAAGTGAGAAGAAGACCAAAGTCTCCAAGTTGGAGGAGAAACCCAAGAGTTCAAAGGCTGTTACTAAAGATGTTAAACCGAGGAAATACAAAGGCTGCGAATCATCTTCTATGCGCAGGCGTCGAAACCTTCAAATTCTATTCAACAATACAAcaataataccttttaaatggCGAGGAAAATACTTATGCTTTTATTGTAGCAAAGATATAGCTGAATATTCAGAATTAAGAAAGCATACCAAATCGCACGGGAACTGCTCCACTCGAGATCATTCTTTGAAAGTGTTAAAGGGCGGACAGAATATGGAGATCAAAATTGATGTCTCCGATATTGCTTGTGAAATTTGCTCCGAACCTTTTCCGTCTTTTGACGAAATGATCAACCATTTATATGTTAAACACAAACTTGAATATGACAAATCAGTAGAAATGGCTATAGAGGAATATAGATTAGTTGACCTCAATTGTATAGTTTGTGAGGAAAAGTTCACGTATTTCGGTTATTTAGTCTCTCACGTTAATACAAATCATCCGAAAAATTGTCTAATTTGCGATAAGTGTAACCAAAAGTTTAACAAAAAGCGAGATTTGTTTTCTCACATGAAAAATTATCACAGAGAAGGAGGCTATCAATGCGAATTGTGTCCTCAAGTTTTTAGTTCGCTTAATATATTGAGAAAACACAGAAATAACAGACATTTGACTAGATGTAATATTTGTCATCTCAAACTACCCTCAGCTGCTTTGAAACAAAAACACATAGATTTAGAGCACCCAGACGATGGGTCTCTCCAATGTGACAGTTGTTTCAAAGAGTTTCACACAAAACAAGGTCTTAGGATGCACAACAGAAAGTGCAAAGGCGAAGGCATCTTcgaatttgcaataaaaaaagaagaatatgtTGCTATGGATTTGGATCAAAATTACGACGACCAAGTGAAGAGGCCTAGCGTTAAACAAATTCGAGAAAATATAGTCATTGTCATAAATATGTCTACTGCgattccttttaatttttataaaaataagtttaactGTTTTTACTGCTCAAAAGATTTCGCAGATTCTGACTCGATGAGGGAGCACACTGTTTTAGAACACCCTGTGTGTGATGTTAAACAAAAATGCATTCGGAAATGTAGGGAATCGGTCGCTTGTGTCAAAATTGACGTTTCCTCTTTAGCTTGTAAAGTATGTTTTGAATCCATTAGCGATTTGGATAACTTACTCGATCACTTGATATCCAAACATGACGCGAACTACGATAAGTCTATAACAACGTGTCTCCAGCCTTACATACTCATCAAAGACCATATGGCATGTCCAAATTGTCCAGGAGAAGTCTTCAGATTTTTTGGTACCTTGCTAAAACACATGAACAAGAAACACACGAACAATAACATAATCTGCGTGTATTGCGGCCAAACTTTCCGCCGGGATCAAAACCTTCGCGTACATATATGGAGACATCACCGAGATGGCAGGTTCAAATGTAATATATGCGGTGCTGAGTGCAATATTCCATCCAGATTATATATGCATATGGCTAGAGCTCATGGTGTTAAGGCAGCAAAATGTCCAAAATGCCCCGAGAGCTTTGCCACTCAATATCTGCGGCAGAAGCATTTGATAGAAGCTCACGATTGCGGACACAAATGCTCGTACTGCGGGAAGCTTTTTACACGTAATTCGTTTATGAGGGACCACGTAAGAAGAACGCATCTCAAGGAGAAAAATGTTGAATGTTCCATTTGTAATATGAAGTTCTTTAACAATATTCTCCTTAGAAGGCATATGGTGAAACACAGTGGGGAGAAAAATTTCCATTGCGATATCTGCGGTGAAAGATTCTTCTGGAGGAAAAGTTTAAGGACCCATATGACTAGGCATAGTAAACATCTGAACCCAGTACAGATTTAG
Protein Sequence
MEFDEIVVKESPGLCRCCLSEGCYKDLGSEYTWMNETEVYADMLLECFDISITQHNEGPNGPNRLICEVCITRLRDACNFKKQVLDSEKKFIDMLGRGEFRPKMLIYQTQMKCEDPVVDAPAEETEVEYLDDDIDFADDAEELKDESEPTVSDITVSSLPIKGKRGRPKKTVVKSEKKTKVSKLEEKPKSSKAVTKDVKPRKYKGCESSSMRRRRNLQILFNNTTIIPFKWRGKYLCFYCSKDIAEYSELRKHTKSHGNCSTRDHSLKVLKGGQNMEIKIDVSDIACEICSEPFPSFDEMINHLYVKHKLEYDKSVEMAIEEYRLVDLNCIVCEEKFTYFGYLVSHVNTNHPKNCLICDKCNQKFNKKRDLFSHMKNYHREGGYQCELCPQVFSSLNILRKHRNNRHLTRCNICHLKLPSAALKQKHIDLEHPDDGSLQCDSCFKEFHTKQGLRMHNRKCKGEGIFEFAIKKEEYVAMDLDQNYDDQVKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFADSDSMREHTVLEHPVCDVKQKCIRKCRESVACVKIDVSSLACKVCFESISDLDNLLDHLISKHDANYDKSITTCLQPYILIKDHMACPNCPGEVFRFFGTLLKHMNKKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNICGAECNIPSRLYMHMARAHGVKAAKCPKCPESFATQYLRQKHLIEAHDCGHKCSYCGKLFTRNSFMRDHVRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCDICGERFFWRKSLRTHMTRHSKHLNPVQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00013343;
90% Identity
iTF_00795069;
80% Identity
-