Basic Information

Insect: Euplagia quadripunctaria
Gene Symbol: -
Assembly: GCA_963859945.1
Location: OY982574.1:16816020-16818934[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.5e-06 0.00025 22.3 3.6 1 23 271 293 271 293 0.96

2 11 0.00027 0.027 15.9 1.2 1 23 299 322 299 322 0.95

3 11 0.00012 0.012 17.0 0.4 1 23 334 356 334 356 0.98

4 11 0.0021 0.21 13.1 2.2 1 23 363 385 363 385 0.97

5 11 0.001 0.1 14.0 0.8 1 23 391 413 391 413 0.96

6 11 0.00058 0.058 14.8 0.7 1 23 419 442 419 442 0.97

7 11 0.0026 0.26 12.8 1.4 2 23 448 467 447 467 0.97

8 11 9.8e-06 0.00098 20.4 1.4 1 23 473 495 473 495 0.98

9 11 7.3e-06 0.00073 20.8 1.6 1 23 501 523 501 523 0.98

10 11 6.9e-05 0.0069 17.7 0.3 1 23 529 552 529 552 0.97

11 11 2.5 2.5e+02 3.4 2.0 1 22 558 579 558 579 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.5e-06	0.00025	22.3	3.6	1	23	271	293	271	293	0.96
2	11	0.00027	0.027	15.9	1.2	1	23	299	322	299	322	0.95
3	11	0.00012	0.012	17.0	0.4	1	23	334	356	334	356	0.98
4	11	0.0021	0.21	13.1	2.2	1	23	363	385	363	385	0.97
5	11	0.001	0.1	14.0	0.8	1	23	391	413	391	413	0.96
6	11	0.00058	0.058	14.8	0.7	1	23	419	442	419	442	0.97
7	11	0.0026	0.26	12.8	1.4	2	23	448	467	447	467	0.97
8	11	9.8e-06	0.00098	20.4	1.4	1	23	473	495	473	495	0.98
9	11	7.3e-06	0.00073	20.8	1.6	1	23	501	523	501	523	0.98
10	11	6.9e-05	0.0069	17.7	0.3	1	23	529	552	529	552	0.97
11	11	2.5	2.5e+02	3.4	2.0	1	22	558	579	558	579	0.95

Sequence Information

Coding Sequence: ATGGCTAACGTAAAGCGTAGATTAAATTCACATAAAAATGAATCTAAAAAGAAGCAGACTATGGGttgtacaaaaaaagaattacgatCGTTGCGATCTGTGATTGACAATCAAATAATGAATGGCATTAAGAGCAGTGAACCAGAGCCTCGAGTCACCAAGAAACGCAAAAATAAAGCAAATAACCTGGATGATAAGATGACGTTATTGACTCCttatgaaaaatatacatttttacataaactCACAACTAAGTTGAATCTAAAAAAGACATCCGGTGTTAGAACCACTAGACAATCTAAACAACCTGACATTGATACACCTACACCTGAACTACCAGGTCTTATGAAGACTAAAACAAGTCATCTCAGAAGcactaagtatttaaaaatcatggataatgtaataaaaaatgaattaggTATCtccaataaacttaaaaaaactaatttatcttCAAAAATTGGAGTGACCAATAATAATGAAAGTGAAATAAttaaccaaaataataaaactgagaaatatattaaattacctGACAAAACTCACAAAACCACATCCCAAATTAAGAAAGCTGCGGCTGTGGTTTCTGTAGATGTATCGGGAGCTCCTGAAAATATTCTGCCAGTTCCAGATAAGCCAATTCAACAACAAACTGTAATAGTCAATTTTGCAGATGAACCTAAACAATTGTCACCACCACCACCTCGTAGAAAAGGCAGACCAAAAAAGAATCCAGAAATTAAGAAGACACTGGTAAAACAGAAACGAGTTACTCTAACCAATGGTGTAGTTTACTCACTACCTCTATTTGAATGTGATTATTGCAATAAGTCATTTAACAGGAAACATTCACTAGTGAGACACATCTACCTACATCTTGGCAGGAAGCCACATGCATGTCCAGTTTGCCCAAAAAAGTTCCGCattcttaaaaatatgaaaactcaCATGGACCGGGATCATTGTGTTCCTAATGTTGATGAAAATACAGAAACGTATTCTTGCAATATCTGTGACAAACCATTTTTAActgaagaaaatttaaaactacaCCTAACAAGTCATGCCAAAGGTGAAAATTCATTCAAATGTATCTATTgcgacaaaaaattttcttacCAACTGTTGTTAATTCAgcatgaaaaaaaacatttggtaACTGGAAAATATCTATGTACATTATGTGATGTAAAGTTTAATTCTCGGGATAAACTGTATGTGCATGTGAAGAGCCATTTGAAACTTATTGATTACATTTGCCAGTATTGTGGCAGAGAATTTTTAAGAGCTAACTCAATGAAGAGGCACGTGCAGACAATGCACAGAGGCCGTACAATACAGTGTCCAATCTGTAACAAAAACCTGAAGGGACATTTAACTGAACATATGCGTACACATGACAACAAGCGTCCACATAAGTGTCCTGACTGCGGTAAACTTTTTGCACAGTCCACTCAGATGAAAGTACACCGTCGTGGCCATACTGGGTTTCGGCCATACTCATGCAGGATATGTGACCGTCCATTCTCTCATTCGAATGCATTGATGTTACATCTTAGACgtcacactggtgagaaaccatttCCTTGTGCTGAATGCCCTATGTCTTTCTCGCAGTTACCACATATGAAAGCACACATGTCAAAGATACATGGTAAAGTAAACCCATATAAATGTCTGAAATGTTATGACTATTTCAAACTGAAGAAGGACCTtcttgttcataaaaaaacttgcAATGGTACTGGTATTGATACTGATCTATATGGGGATGAAAGACCATATGGAGATGGCTCACAAGATAATGATGCTGAAATAGTTCCAGTGGAATCCACCATGACGTTGTCTCGAATGAGGTTTCTATTGGCTCTTCTACTGACAATGATTGCTAGCAAAGAAAAACTCAAATATTTAGgaTTCAACAAACGTCTTGTAGATGATTTGCTTGTCGAGTCTTTGGAGGCTATGGACCAAATCCCATGCAAGGACGAGACTATGACTCCGCTAGTGCGTCTCAGGACTAACATTGAGAAGTTGCTAAAAGGTACAGTTCCTCCGGAACAGATGGAGAAGTTCAAGAAGGAGAACAAGTCAACTGAAGAACTCCTCGAGCTGTTAACAAGCGAGAAAGAGAAGTAA
Protein Sequence: MANVKRRLNSHKNESKKKQTMGCTKKELRSLRSVIDNQIMNGIKSSEPEPRVTKKRKNKANNLDDKMTLLTPYEKYTFLHKLTTKLNLKKTSGVRTTRQSKQPDIDTPTPELPGLMKTKTSHLRSTKYLKIMDNVIKNELGISNKLKKTNLSSKIGVTNNNESEIINQNNKTEKYIKLPDKTHKTTSQIKKAAAVVSVDVSGAPENILPVPDKPIQQQTVIVNFADEPKQLSPPPPRRKGRPKKNPEIKKTLVKQKRVTLTNGVVYSLPLFECDYCNKSFNRKHSLVRHIYLHLGRKPHACPVCPKKFRILKNMKTHMDRDHCVPNVDENTETYSCNICDKPFLTEENLKLHLTSHAKGENSFKCIYCDKKFSYQLLLIQHEKKHLVTGKYLCTLCDVKFNSRDKLYVHVKSHLKLIDYICQYCGREFLRANSMKRHVQTMHRGRTIQCPICNKNLKGHLTEHMRTHDNKRPHKCPDCGKLFAQSTQMKVHRRGHTGFRPYSCRICDRPFSHSNALMLHLRRHTGEKPFPCAECPMSFSQLPHMKAHMSKIHGKVNPYKCLKCYDYFKLKKDLLVHKKTCNGTGIDTDLYGDERPYGDGSQDNDAEIVPVESTMTLSRMRFLLALLLTMIASKEKLKYLGFNKRLVDDLLVESLEAMDQIPCKDETMTPLVRLRTNIEKLLKGTVPPEQMEKFKKENKSTEELLELLTSEKEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00157443;
90% Identity: -
80% Identity: -