Basic Information

Insect: Euplagia quadripunctaria
Gene Symbol: yellow-f2
Assembly: GCA_963859945.1
Location: OY982589.1:6179237-6232780[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 6.9e-06 0.00069 20.9 3.7 1 23 237 259 237 259 0.98

2 10 1.9e-07 1.9e-05 25.8 3.3 1 23 264 286 264 286 0.98

3 10 1.8e-07 1.8e-05 25.9 2.4 1 23 292 314 292 314 0.99

4 10 9.2e-06 0.00092 20.5 5.3 1 23 320 342 320 342 0.98

5 10 2e-05 0.002 19.4 1.3 1 23 348 370 348 370 0.97

6 10 3.3e-06 0.00033 21.9 3.0 1 23 376 398 376 398 0.98

7 10 0.015 1.5 10.4 4.5 1 23 404 426 404 426 0.93

8 10 2.4e-05 0.0024 19.2 6.4 1 23 432 454 432 454 0.98

9 10 1.8e-06 0.00018 22.7 4.4 1 23 460 482 460 482 0.99

10 10 2.6e-06 0.00026 22.2 0.9 1 23 488 510 488 510 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	6.9e-06	0.00069	20.9	3.7	1	23	237	259	237	259	0.98
2	10	1.9e-07	1.9e-05	25.8	3.3	1	23	264	286	264	286	0.98
3	10	1.8e-07	1.8e-05	25.9	2.4	1	23	292	314	292	314	0.99
4	10	9.2e-06	0.00092	20.5	5.3	1	23	320	342	320	342	0.98
5	10	2e-05	0.002	19.4	1.3	1	23	348	370	348	370	0.97
6	10	3.3e-06	0.00033	21.9	3.0	1	23	376	398	376	398	0.98
7	10	0.015	1.5	10.4	4.5	1	23	404	426	404	426	0.93
8	10	2.4e-05	0.0024	19.2	6.4	1	23	432	454	432	454	0.98
9	10	1.8e-06	0.00018	22.7	4.4	1	23	460	482	460	482	0.99
10	10	2.6e-06	0.00026	22.2	0.9	1	23	488	510	488	510	0.98

Sequence Information

Coding Sequence: ATGGAGAAACCACTTATGTGTAGACTATGTCTTGCTGTGGACGTTCGAATGCATTTGATAGTTAACACAAAACTTCAAGAAATGTACGAGAAATTGACTGATATCCCTTTTGAGACCAAAGACAACAAACCAGCGCTATCCTGTTACATGTGTTGCGCTAGGCTACAAAACTGCTACCAACTGCGTATGAACTGTCTTCGTAGTGAAGAGCTTCTTACAGAGATGATAAAGAGCAATACAtttGAACAAATCAAGCCCCAAGACATTCCCATGGGAAGAAGACTTGAAGTCACTCCTGTCAGACATTTAACCACAATGAACGTGGTGGACGATAATCCTGGTTCTTTTACTTCCGTTGAAGTAAAACTGGAAGTTATTGAAGATACAGCACAAGAAGATcttgaagaaaataattacgAGTTTGATGACGTGACGTCATCTTCTGTCGCAGAAACTCTCCAGCCCATTAAGAAGGAACCAGATCATGAAACAAGTGAACCAGGGGCAATGGAATTGTCAGCAACCCCCGCTGAAGATACATCCTCCCTCCAATATGGGCAGgtagaaataaaagaagaaatgatTGAAAGTGATGATAACGAAATTGATATAAATGAAGAACATACTGAAAAAGCAGACCTCATAAACGACAGTACTGAAAAtaatgaaactatttttaatgcTAACACCAGTAACGTAAAACGAATACATAAATGTCATATATGTGAGAAAACATTTACTAATGTCAGTAACTTAGACTCTCACATTCGTGAGCACGGAGAAAAACCACACAAATGCAACATATGTAATAAAGGTTTTAACAGAAAGAGTAATTTAAACAGCCATTTGCGTGTTCACAGTGGTGTAAAAGCTTATAAATGTGACATTTGTGAGAAATGTTTCAGTGGCTCAAGCGATTTAAAGCGACACATTCGTCTACATACCGGAGAAAAACCACACAAATGTCATATATGTGAACGAAGTTTCTCACAAAAGAGTTATTTAGACAGCCATATACAAACGCATATAGGCGAACGACCTCACAAATGTGATGAGTGCGAGAAATCTTTCTTCCAACCGAATGAATTGAAAAGGCACGCTTTAGTTCACACTGGTGAGCGACCGTTCAAATGTGACTCTTGTGACAAATGTTTCATAAGAGCCGGTGATTTGAAAAGACATTATCGTTTGCACACCGGGGACAAACGGTATTGCTGCGACTTGTGTCCTAAAAGATTTTACCAAAAAACTCATTTAGACATTCATAATTTACtgcacactggtgagaaaccgtTCAAATGTCATTTATGTGAGAAATGTTTTAATCAAACTGGTGATTTGAAGAAACATATTCGTCAACACACTGGTGAAAAACCCTACAAGTGCAAAGTGTGTGATAAATGCTTCAGCAACAACAGTAATTATGTGATCCATAgtcgtacacacactggtgaaaaACCTTATAACTGTGATGTATGTGAAAAACGTTTCACTACGAAGTCTGATTTAATTAATCATAATCGTGTACACACTGATGAAAGACCTTACAAGTATTCCAAGGATACGGCTACGAGATGGACTCCTGAAAGCATACACTTCAAAGAGGAGGACTTAGAAGAGAAAGAGATGTATTTCAAACAATACAATAACGTACTCGTAGGACTAGAGATATCTGATGACAAATTATTTCTCACTGTACCTAGAATTCGCTACGGAATACCCTCCACACTTAACTACTTCAAAGTAAAAGGTAATACAATAAACCTGACACCGTATCCTGACGAGAACAGTATACCATCTTTTATCTCTGTTTATCGTCCGAGAATAGACGAATGTGGTAGGCTATGGATGGTGGATACTGGTCTACTTGGGGTGCCTGGCAACCCTGTGCAGTTGAAACAGCccgaaataataatattcgacTTGAAAACCGACAAAGAAATACTTAGATATCAACTGAAGCCGAGCGATTTGTATAACGGAACTACTgcagGGTTAACGTCTATCACGGTAGATGTGACTAAAACAGCATGCGACGATGCATATGCTTACATAGTCGACTGTACCACAGGAGGTCTCATAGTCTTCTCCCTGAGGAAAAGAGACAGTTGGCGTTTCACACATCCTACTTTCACCTATGATGACGGAGCTTCCTTTATATTAAGAAACCATCTCATAAATTGGCGAGTTGGTCTCTTCAGCATCGCCCTCTCCGACCCTGATGCCTCAGGCGTTAGGACAGCATACTACCACCCATTTCTGTCAACCCAGGAATTCTCCATCACTACCGAtgtgttgaaaaataaaaatggcgaTATTGAGAAGAATTTTAAGGTATTAAAGGCAAaaacgtgtgaggtgtctttagGACAACCGCTAGTAGGTGTTCGCGGGCCATATTCTCAGAGTGGAACCCATGTCTACGACAGTGCGTCTAGAAACCTTTTCTTTGCGAATGTCGCGCGTGATGGAATCCTTTGTTGGAATATTGACAAGCCGCTGAAACCAAAGAATACTGCTTTAGTAGTTCATGACAATAGATGGCTCACCTTTATTATAGATGTCAATGATACGGCGAAATGGTTGAGCCCTGATGGTATATATTTCGATGAAGAATTAGAAGACAAAGATAAATTCTTTATTCAGTACAACAATGTGCCGATTGGCTTTGAGGTCTATAAGGAGAGAATGTTCGTCACTGTCCCGAGGAGACGATTTGgaATACCTTCTACATTAAACTACATAGATATGTCAGCGGAGTCCACTCATAGTCCACTGTTGAAGCCGTACCCTGATGTGGCCAGCATCACGTCATTCGTTTCCGTTTATCGGCCGAGAGTAGACGCGTGTGGAAGGTTCTGGCTCATTGACACTGGACTACTTGAAGTGCCTGATAATCGTGTGCAGATAAAGCAACCAGAAGTAATAATCTTTGATTTGGCAACTGACAAAGAAGTGTTGAGATATCAATTTAAGCCAAGCGATTTATTTAACGGCAGCACATCAGgcTTCATATCAATAACCGTGGACGTGACGAAAACGACATGTGACGACGCGTACGCGTACATTAACGACCTGGCGACGGGAGGTCTCGTAGTTTTCTCCTTGAGAGAAAGAGACAGCTGGCGTTTTATGCATTCTACTTTCAATTATGATCCATCGGCCACATTTGATTTGGGTCAATATACCATAAATTGGAGAGACGGGATCTTCAGCATTGCCCTCTCAGACCCTGACTCCAGGGGCGTCAGGACAGCTTACTACCACCCGTTCATATCTACCCAGGAGTTCTCCATAACGACTGATATCTTGAAGAACAAGAATGgcgactttaaaaataacttcaagTCGCTGGGAGACCGAGGGCAGTTAACCCAGAGCGGTTCTCACGTGTTCCACGGCCCTACCAAGACACTACTTTTCGCCAACATCGCTCAAAACGGTATACTTTGTTGGAACGAAGACAAATCTCTTACTGGGACGAATACTGTCTTAGTCGCTCAACATCAACAATGGCTGGCTTATATCACTGGCATGGTGAACATGCCTGAAGAATATGCAGAAATACTCGAACACTGCTTAACAACTGGCTATCTGTTGTGGGACAATAAGTTCTACGAACAAATCAATGGCGTGGCAATGGGCTCCCCTGTATCGCCCGTTGTTGCTGACATCCATATGGAGGCCTTCGAGTCTCGAGCTCTGCAGGACTGCCGCCATCACACCTAG
Protein Sequence: MEKPLMCRLCLAVDVRMHLIVNTKLQEMYEKLTDIPFETKDNKPALSCYMCCARLQNCYQLRMNCLRSEELLTEMIKSNTFEQIKPQDIPMGRRLEVTPVRHLTTMNVVDDNPGSFTSVEVKLEVIEDTAQEDLEENNYEFDDVTSSSVAETLQPIKKEPDHETSEPGAMELSATPAEDTSSLQYGQVEIKEEMIESDDNEIDINEEHTEKADLINDSTENNETIFNANTSNVKRIHKCHICEKTFTNVSNLDSHIREHGEKPHKCNICNKGFNRKSNLNSHLRVHSGVKAYKCDICEKCFSGSSDLKRHIRLHTGEKPHKCHICERSFSQKSYLDSHIQTHIGERPHKCDECEKSFFQPNELKRHALVHTGERPFKCDSCDKCFIRAGDLKRHYRLHTGDKRYCCDLCPKRFYQKTHLDIHNLLHTGEKPFKCHLCEKCFNQTGDLKKHIRQHTGEKPYKCKVCDKCFSNNSNYVIHSRTHTGEKPYNCDVCEKRFTTKSDLINHNRVHTDERPYKYSKDTATRWTPESIHFKEEDLEEKEMYFKQYNNVLVGLEISDDKLFLTVPRIRYGIPSTLNYFKVKGNTINLTPYPDENSIPSFISVYRPRIDECGRLWMVDTGLLGVPGNPVQLKQPEIIIFDLKTDKEILRYQLKPSDLYNGTTAGLTSITVDVTKTACDDAYAYIVDCTTGGLIVFSLRKRDSWRFTHPTFTYDDGASFILRNHLINWRVGLFSIALSDPDASGVRTAYYHPFLSTQEFSITTDVLKNKNGDIEKNFKVLKAKTCEVSLGQPLVGVRGPYSQSGTHVYDSASRNLFFANVARDGILCWNIDKPLKPKNTALVVHDNRWLTFIIDVNDTAKWLSPDGIYFDEELEDKDKFFIQYNNVPIGFEVYKERMFVTVPRRRFGIPSTLNYIDMSAESTHSPLLKPYPDVASITSFVSVYRPRVDACGRFWLIDTGLLEVPDNRVQIKQPEVIIFDLATDKEVLRYQFKPSDLFNGSTSGFISITVDVTKTTCDDAYAYINDLATGGLVVFSLRERDSWRFMHSTFNYDPSATFDLGQYTINWRDGIFSIALSDPDSRGVRTAYYHPFISTQEFSITTDILKNKNGDFKNNFKSLGDRGQLTQSGSHVFHGPTKTLLFANIAQNGILCWNEDKSLTGTNTVLVAQHQQWLAYITGMVNMPEEYAEILEHCLTTGYLLWDNKFYEQINGVAMGSPVSPVVADIHMEAFESRALQDCRHHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -