Equa029841.1
Basic Information
- Insect
- Euplagia quadripunctaria
- Gene Symbol
- -
- Assembly
- GCA_963859945.1
- Location
- OY982586.1:5214043-5214378[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-08 5.2e-05 23.8 0.0 2 41 29 69 28 70 0.93 2 2 2 1.5e+03 -0.0 0.0 22 31 92 101 91 107 0.86
Sequence Information
- Coding Sequence
- atgAACCTGAATAGAAAATCAAACACATctacgaaaaaaattaatagaaggAAACCGGGATccagaaattataaaaattactcCGACGAAATGTTGAATGTAGCTGTAgaatcgtttaaaaataaagttatgtcTAGTAGGGAAGCTGAAAAACAATTTGGCATACCAAGAAGGACCATACTCAACAAGGCAAAACAAGTACACATGAAACCGGTAGGGGGGCAGAAGAAATTAACAGACGCTGAAGAAGAAAAACTTGTGAATATTTTGGTGGCTGCAGGTGAATATGGTTGTCCAATGACTAAATTAGACTTCAAAATGCTAGTTTTACATTGA
- Protein Sequence
- MNLNRKSNTSTKKINRRKPGSRNYKNYSDEMLNVAVESFKNKVMSSREAEKQFGIPRRTILNKAKQVHMKPVGGQKKLTDAEEEKLVNILVAAGEYGCPMTKLDFKMLVLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -