Equa020144.2
Basic Information
- Insect
- Euplagia quadripunctaria
- Gene Symbol
- retn
- Assembly
- GCA_963859945.1
- Location
- OY982575.1:14804666-14816262[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-19 3.6e-16 60.3 0.0 16 89 3 74 1 74 0.94 2 2 3.6 9.8e+03 -2.0 0.0 25 37 204 216 164 220 0.53
Sequence Information
- Coding Sequence
- ATGTTAAAAAgaaCACCTATCAATCGGTTGCCAATAATGGCTAAGTCTGTATTAGACCTATATGAACTGTATAACTTGGTGATTGCTCGTGGAGGCTTGGTGGAAGTAATCAACAAGAAACTCTGGCAGGAAATTATCAAGGGATTAAGACTGCCATCATCGATCACATCGGCGGCTTTCACGTTACGCACACagtATATGAAATACTTGTACGATTACGAGTGTGAGAAGAAGAACCTTTCTACTCGGAGTGAGTTGGATGCCGCAATTGAAGGTAACAAGCGCGAGGGGAGGCGCGCTTCGGGACAGTACGATGCACAAGCCGCATTAGCTATGCCGCCTCTGAACCGTGGCATGCCTGCTTCATTGGCGCAACTTTCCCAACACATGCAGcctctttctctttctctcgGAGGTGTGGCACCACGTCTACCGCCGCTACCACCACACGCGCCACATCTGGCGCAACATGACATTGAGTTCAGGGTGCGCGAGTACATGAAGATGATTCAACAGCAGAGGGAGCTGATGAGAAATGGTTCCGAGTCACCGCCAAGTGTGAATGGTCCGGCGCCGATAATGTCACCGCGCGATGCGGCCGCACTCAGCGCCATCGACGTATCCCGCCTCACGCTCTGGTCACTCtacaataacaacaataacaatagtCCACAGCCTGATCTTGAACCACAACGCGAGGCATTAAACCTGAGCGAGAGCCCGAACTCTAGTGCATCAGGCGGTGATGCCAGCACAGGTGACCAGCAGCTGGTAGTGTCAATAGAACTGAACGGTGTCACATACGAGGGCGTACTGTTCCCCGCCAATAACTCACAGAATGGACACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MLKRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGMPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEFRVREYMKMIQQQRELMRNGSESPPSVNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSASGGDASTGDQQLVVSIELNGVTYEGVLFPANNSQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00345598;
- 90% Identity
- -
- 80% Identity
- -