Basic Information

Gene Symbol
Arid4b
Assembly
GCA_963859945.1
Location
CAWLEN010000041.1:1-19000[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-30 1.1e-26 94.0 0.1 1 89 61 147 61 147 0.96

Sequence Information

Coding Sequence
GTACCTAAGAAAGAGGCCCGTGAATTTCGTAAAGGGAGTGCGCCTCTAGAATGGGCGGGTGTGGAAGCCGCGTTGCAATATCTCAACAATGGCGTGTTGCCGCCGCACTGGGATAGAGACACACTTTTCAACGAGCCCAGGAATACTTCCGATGATAGTTCGGATGACGAGCCGCGCGAGGAAAAGGACCACTTCGTCGCACAACTCTACAAGTTCATGGACGAGCGAGGAACGCCACTTAACAGGAACCCCACTATCGCGAACAAAGACATTGATTTGTATAGActgtttaaaGTTGTAGAAAAGTTGGGTGGCTACAACAGAGTGACCAATCAAAATCAATGGAAAACTATTGCGGATAAGATGGGCTTCCATCCAGTTACTACAAGTATTACTAATCTATGCAAACAGGCTTACAAAAAGTTCCTACACAGCTATGAAGATTTTTACCGCAAGCTCGGCGTGACGCTAGTGGCGCACCCGCGCGGCGCGCGCACGCCGCCGGCCGGCCGCTCGCTCATCCGCGACCGCGACCGACACCCGCCCACCTCGTCCTCCACCTCGGCCTCCACGTCGGCCTCGACGTCCGCCTCGGCGTGCTCTACACCCACCAGCACTCCTACACAGCAACGCGGAAAAGATAAAGATTCTTCTGATAAGAGTGAGACTGACAAAAGTGAGAAAAGTGAGAAGGATGAGAAACTAGAGAAGCCTGAAAAACCAAAGGAGAAACCTCGTGTCAGTGATGGCGAGGATAGTGCTGATAATCAGCCATTAGTAACTACAGTTGCGCCTAAGGTAGAAAAGGAGAAAGAAAAAGACAAAGATAAAGAAAAGgagaaagaaaaagataaagaaaaggAGAAAGAAAAGgagaaagaaaaagataaagaaaaggAGAAAGAAAAGGAGAAAGAAAAGGAGaaagaaaaagagaaagaaaaagagaaagaaaaagagaaagaaaaggagaaagaaaaggaaaaagAGAAGGAGAAAGAAAAAGAGAAGGAAAaggaaaaagataaagaaaggGAAAAAGACAAAGAAAGccaaaaagataaagaaagggaaaaagataaagaaaaggagaaagaagagaaaaaagaaaaggacAAAGAGAGGGACAAGAGCTCCACTTCAAACAGCACCAGTGAAGAGAAGGCCGTAGTTAAGCCGCGTTCGCAGTCCAAGGGACGCACGATAACTCCAGTCAAGACAGACCACGACAAGAGAACTCCTAAGAGACGATCTTTGTCTTCGAAAGGTGAAGGTGCAAGTACCAGCACCTCGCGAGCGTCTCGTCGCCCGCACGTTTCCACTGATAGCGACAGTTCGGGACGAGCGTCCAGATGTGGACCAATAAAAAAGATGCAGAATCGTCGTAGTCAGAGCGCGAATTCTGCAAGCAGTGGGAATACGATTGCTTCTAATAGTAGCAAGCGTCCTCGCAAGAGAAAGAATACtgaGCCTTCAATGAATGAATCCACGAGATCAAGCGTCTCTAACATGAAAGCTCAAGTTGGTGACAAATTAAAGGTGTATTACGGACCTACCCAGTCGGAGTCgaagGTGACATACGAAGCTAAGGTTATAGAGGTGTCATCAGAAGGCATGCTGCGAGTACACTACACGGGATGGAACACGCGCTACGATGAGTGGATCAAACCGCAGAGAATTGCGCTCAACGTCACACAACATGAGCAACGGAATAAAAAGaATACCAGTATGAGCAGACGTGTAAGAACAAAGAGAACTGAAGAATCATCAGCACGATCTGATTCAGATAGCGACTCTGAAAGCGATGAAGATGTCAAGAGACCTCCTAAAAAGTCAGATGAGAAGCCCAACTCAAAacCTCCATCAAGATCTAAAGACCTTAAGTCAAGCGATAGCAGCAGTTCAAGTAAACCACGCAAGAGGCCTGTAAGAACAATATCGACTCCTACAACAGTTTCCCCAGCTAAAAAACCTCGCCCAAACGTCACTGGACGTGATTACGATCTAAACGAAATTAGGTCTGAATTAAAAGGACTGCACACTGTAAAACAGGAAACCGatgaaacaaataaatctgAAGGGATGGACGAATCGACGGTTACATCTTCCCACTCAAACCCAGCCCCTCCTGAACAACCTCAGCAAGAGAAACAACCAGAAGATGTCTATGAGTTCAAAGAACCAGAACCATTTGAACTAGAATTGCATGATGAAAAGAAAAAGCGCACCCACCGCATCTTCGATGATATCTCCCCCAGCAAATACACATCGACGCTATCTAAATCCTTGAGTGAAGAAATATCAGAAGATCCAATGAGGGTACGACCTCCGTTAAGGTCGCCTTCCTTATCACCTTTCCGGGATTTCGGCAGCTCTAGAGAAGTAGGCGGCCGTCAAAGCCCAGAAGACGATTCCAAAGATGGACTCTTTTCATTAGATGATGATTCATTCCCGGGCGATGGTAGTTCTGGACCAACATTCGAAGGATTTACTCCAGCTAAAAATCAAGAAACGTATTCTAAAAAGAGTAAAGTCTCTAAATTAAGAGAGCTTATTGATGATTCACCAGACTCTCCTGCAGATGACGAACAATCATCAGATGATGAGCCTGAAGATATAACTATAAAAGAAGAAGTAGAAAGGAATCCCACCCCATTATTATCTGTAATCGATAACTCAAAAACACCAGAACCTGTTTTGAAGGAGGAACCAATGGATGCGGAACCAGAATTACCGCCCACAGAAGTAGAAATAGTTAAAGCAAAGGAAACATCCAAAGAAAAGACTCCTGAACTACCAAAGACGCCGCCGCTACAAAAGCAACCCGAAATTCAACTACCTAAAATAAGTATTGTTACGAGCATTTCAACAAATAATACTACCGCTACCGCTACACCGACTACTAATACTACTGCTGTAACTGTTTGCGCTCCTTCTCGTATTCCCAGTCCAACTTCTAATCCATCTTCCCCGCCTATAgtcgaactaaaaaagaaagaagaactTCCTAACATTAAACTCATTGAACTCCCTAAAACTAAAATCTTAGAACTCCCCAAAACGAAACTACTAGATGTCCCTAAGACAAAAATACTAGAACTtcccaaaacaaaaatactagaaCTTCCCAAAACAAAAGTTCTAGAACttcctaaaacaaaaatattagaagTGCCGAAAACAAAACATGTAGAGCAATCTAAAACACAAATATTAGAGCTACCTACAGAAGAgccaaagaaagaaattaaaaaagaagagccagcaaaacttattttagttacCCCACCTGTTTTAGAGCCCAAAGAAAAATCACTTACAATTAAGATTGACAAGAAACTGGACCCTGTGCCGATATTAGAGCTTGCTTCATCGAAGCTACAGCCTCCTTCTAGTCCACTTATTGACACTGAAGAGGACAAGTCTGAACCAGACAGTCCAGCAAGAATCGATGTCCTTCCAGAGCCTCCACCCGGGTTTTTGCTGCAATCAGAGGGTCCTAAAATAGCAGAAAAGCTTCTAAAAGCTATTAGTAGTGCTAAGAGATTATCTATGTCTCCTCCACCATCGCAAGACCGACCAGACACTCCTAAATCTGACACAATTAAGTTGAATAAGTCTGACATCAAATTATCTCCTGAACCAAAACCTAACCAAGTGAAACAGGAGCTAACAAAACCACTCGTTAAGGCCGagccaataaaaaaatcgaCCGACAGTACCACAGAATCTATATTTGGTGAACCACATAACTTTTTGGATTTGAAACGAGATAcgttagatattaaaaagcctAAACCTGACGAACCTGTAGTACCGAGGTTGCAAAGCCCGTTGAACATTTTAGAACGAAGGAAGAGTGTGGCAGATCATCCGCTGAGTGTACCAGGCAAGAACAACAAAGTTCTCAGTGACACGATACAGAAGCTTTCAAGTCAAATAAATCAgtcggcggcggcggcggcggctaGTCTTCCGCTACCACCCTTTCCTGCGGAGGACAGAAGCGAATCCAGCGATTCCGATGATTCTGACAGGAGGTTAATAATAGATAAGCTATCAGTTGAAGAATGGGGCTCCGGCGGTAGTTCTGAAGCCGTCCCGGCCGCAGCCGTCGTGGCCAGCGCAGCCACTCGCGCTCTACACGCCGGCAAGTCTCTGGGCGAGTGGAGTGGGGCCGAGTCGCTGTTAATGCTCGAGGACGCTTGTAAGAACGAGAGGAAACACAGTGCGAGCGTCGTAGTGGCGGGCAGCGGGCGCGTGGCCGCAGTGGGCGCGGCGGGCGCGTGCGTGGCGGGCGCCGGCGAGGACGACA
Protein Sequence
VPKKEAREFRKGSAPLEWAGVEAALQYLNNGVLPPHWDRDTLFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDERGTPLNRNPTIANKDIDLYRLFKVVEKLGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSYEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDRHPPTSSSTSASTSASTSASACSTPTSTPTQQRGKDKDSSDKSETDKSEKSEKDEKLEKPEKPKEKPRVSDGEDSADNQPLVTTVAPKVEKEKEKDKDKEKEKEKDKEKEKEKEKEKDKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKDKEREKDKESQKDKEREKDKEKEKEEKKEKDKERDKSSTSNSTSEEKAVVKPRSQSKGRTITPVKTDHDKRTPKRRSLSSKGEGASTSTSRASRRPHVSTDSDSSGRASRCGPIKKMQNRRSQSANSASSGNTIASNSSKRPRKRKNTEPSMNESTRSSVSNMKAQVGDKLKVYYGPTQSESKVTYEAKVIEVSSEGMLRVHYTGWNTRYDEWIKPQRIALNVTQHEQRNKKNTSMSRRVRTKRTEESSARSDSDSDSESDEDVKRPPKKSDEKPNSKPPSRSKDLKSSDSSSSSKPRKRPVRTISTPTTVSPAKKPRPNVTGRDYDLNEIRSELKGLHTVKQETDETNKSEGMDESTVTSSHSNPAPPEQPQQEKQPEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEISEDPMRVRPPLRSPSLSPFRDFGSSREVGGRQSPEDDSKDGLFSLDDDSFPGDGSSGPTFEGFTPAKNQETYSKKSKVSKLRELIDDSPDSPADDEQSSDDEPEDITIKEEVERNPTPLLSVIDNSKTPEPVLKEEPMDAEPELPPTEVEIVKAKETSKEKTPELPKTPPLQKQPEIQLPKISIVTSISTNNTTATATPTTNTTAVTVCAPSRIPSPTSNPSSPPIVELKKKEELPNIKLIELPKTKILELPKTKLLDVPKTKILELPKTKILELPKTKVLELPKTKILEVPKTKHVEQSKTQILELPTEEPKKEIKKEEPAKLILVTPPVLEPKEKSLTIKIDKKLDPVPILELASSKLQPPSSPLIDTEEDKSEPDSPARIDVLPEPPPGFLLQSEGPKIAEKLLKAISSAKRLSMSPPPSQDRPDTPKSDTIKLNKSDIKLSPEPKPNQVKQELTKPLVKAEPIKKSTDSTTESIFGEPHNFLDLKRDTLDIKKPKPDEPVVPRLQSPLNILERRKSVADHPLSVPGKNNKVLSDTIQKLSSQINQSAAAAAASLPLPPFPAEDRSESSDSDDSDRRLIIDKLSVEEWGSGGSSEAVPAAAVVASAATRALHAGKSLGEWSGAESLLMLEDACKNERKHSASVVVAGSGRVAAVGAAGACVAGAGEDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01360386;
90% Identity
-
80% Identity
-