Basic Information

Gene Symbol
Xbp1
Assembly
GCA_963859945.1
Location
OY982564.1:22150823-22152239[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.8 9.8e+03 -2.4 0.1 16 25 32 41 30 42 0.73
2 3 3.8e-19 5.5e-16 59.3 5.3 2 52 46 96 46 98 0.97
3 3 3.1e-05 0.044 14.7 0.6 33 56 91 114 91 118 0.93

Sequence Information

Coding Sequence
ATGACGGCCCCTATCATCATCACTGTGCCGAACAACTATCTAACGGTGGACGAAATGGAGATGAAGTCGAAGGTTGTGGTCGACGTGGCATCTCCAGCTCCATCCAGAAAGCGCCGTCTAGACCATTTATCGTGGGAGGAAAAAATGCAAAGAAAGAAGTTGAAGAACCGCGTAGCGGCACAGACGTCGCGTGATAGGAAAAAAGCAAAAATGGATGAAATGGAGTCAAGAATTCAATTCTTTATGGACAAGAACGAGCGTCTTACTAGCGAAGTTGAGAGCTTGAAAGCATTGAACGAGCGTTTGTTAAGTGAGAACGCATCTCTTCGCAGCGAGGTGGCGGCGCGGACCGTCGCGGGAGCCCCAAGACCAGCAGAGTCTGATCCTCAGCAGAAGGAAGGGCCCCCGACGGCGATCCGCGCGGCACGCCTGCTGCTGGCGATGTGTCTCCTATCGCAGACCTCCTCGCTCACTTCGACTCAGAAGAGTACCTCGATACCCTCCATCAACTTGCAGACTCCCTCCTCAAAGAAATTGATGCAAGTGCTGCAGGAGCGGCTAAAGatgAGCCAGTCAGGGACACTAGAGAGTGCCTTGAAGGAACTAAAGTGGTGGGGACCACAACAAAGCAACTGGAACCCAGTGAAGGTGCAGTCCTAG
Protein Sequence
MTAPIIITVPNNYLTVDEMEMKSKVVVDVASPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIQFFMDKNERLTSEVESLKALNERLLSENASLRSEVAARTVAGAPRPAESDPQQKEGPPTAIRAARLLLAMCLLSQTSSLTSTQKSTSIPSINLQTPSSKKLMQVLQERLKMSQSGTLESALKELKWWGPQQSNWNPVKVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00869363;
80% Identity
-