Basic Information

Insect: Eupithecia vulgata
Gene Symbol: -
Assembly: GCA_946478135.1
Location: CAMLCK010000189.1:517169-521984[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.29 21 6.5 0.8 1 23 288 310 288 310 0.96

2 9 0.3 22 6.4 0.1 2 23 378 400 377 400 0.92

3 9 0.023 1.7 9.9 1.0 1 23 404 426 404 426 0.96

4 9 0.0017 0.12 13.5 1.6 1 23 432 455 432 455 0.85

5 9 0.016 1.2 10.4 1.1 2 23 462 484 461 484 0.91

6 9 1.6e-06 0.00012 23.0 1.3 1 23 490 513 490 513 0.98

7 9 6e-05 0.0045 18.0 1.8 1 23 519 541 519 541 0.98

8 9 1.5e-06 0.00011 23.1 3.4 1 23 547 569 547 569 0.99

9 9 1.6e-06 0.00012 23.0 2.0 1 23 575 597 575 598 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.29	21	6.5	0.8	1	23	288	310	288	310	0.96
2	9	0.3	22	6.4	0.1	2	23	378	400	377	400	0.92
3	9	0.023	1.7	9.9	1.0	1	23	404	426	404	426	0.96
4	9	0.0017	0.12	13.5	1.6	1	23	432	455	432	455	0.85
5	9	0.016	1.2	10.4	1.1	2	23	462	484	461	484	0.91
6	9	1.6e-06	0.00012	23.0	1.3	1	23	490	513	490	513	0.98
7	9	6e-05	0.0045	18.0	1.8	1	23	519	541	519	541	0.98
8	9	1.5e-06	0.00011	23.1	3.4	1	23	547	569	547	569	0.99
9	9	1.6e-06	0.00012	23.0	2.0	1	23	575	597	575	598	0.96

Sequence Information

Coding Sequence: ATGAGTGTAACTATTACGAAAACCAATGGACCTATTATAAACCCAGCATTGTGCAGATGTTGTAGGGCTATTAAAAAATGTAGAACACTTACTGCTGAATACACTTGGCAGGAAGAGAAGGAGGTTTATGCGGACATGGTTATGGATTGTTTCGGTATTTTGCTCTCCCATGTAGATGACAATTTAAAGGACTGTGGCGTGTGTGCAACCTGTGTGGTCCGACTACGAGATGCAAGTGCATTCCGCCGTCAAGTGTTGCAGTGTGAAGAACTGTTCCTGAATGCTAAACTGCAGCCTGATAAGGAACTTGGAgtagTAAAAGTTACGAGGCAACTGGACATTGATCTGAAAATTGAGCCGAAAGATGATGTGGTAGAAGATGATCTCTTTTTGAATTTCGCGAGTGCAGTTCCTATAGAGGAACCAGTACCACCAGCAGTCTTCAAAAGATCTGAAGAGAAACCACCTCCAGAAATTGACATAAAAGATAATATCCTGGACCTCGTGAACCCCGAACCAGAAGAGAAGGATGAACCGATGAACTTCGAAGATGCTGACGACGATAGAGACAGTGATTGGTCGGCTTCGTCATCCGACTCTGATAAACCTCTGAAACGTAAGAAGAAGGTAGAGAAGAAGACAAAAACTAGTAACGGCAAGCTCGCGAAGAAGAAAGCTAAGATGCTGAAAGAAAAAGTTGGGAAGAAAAAACcagACACAAAAATACAGAAATCTCCTAAGAAGCCACCAGTCGAAAAGAAACCAAACCATGACAGAGATCTAGACTGCATGTCTGAAGAGAATCTCCTCACCATCATCCAGTATTCATACGTGTGCCCTTTCAAGAACAGAAGAAATAACTACTACTGTTTCTACTGTAAAGACTACTATCCGAAACCTGAAGACTTAAGAGAACACACAGTATCCCACGATACGAAACCCTTCCAAATCCTAATGGGTTACAAGAAAATGCCTAAGCTAGACATAACACGAATAGACTGCAGATTGTGCTCATTAAAAATTGACGATCTAAACGTTTTCAAACAGCATATAGACAATGTTCACGGCAAGAAAATTTACTTCCAAGCACCGGATAAGATGCTTCTCTTCCGCCTCACATGGAACGATTTGGTCTGTGTAGTTTGCAACGATGTATTCGAAGATTTCAACACGCTAAGCACTCATATGATAGATACGCATTTCAGTAATTTCACCTGCGATATTTGTGGTATGTGCTTCTTGGAGAAACCGCGATTAGATGCCCATCTAAAAAGACATAAAGACGATGAGAAACACACCTGCGAAATATGCGGTAAAGTCTTCAAATCTAACCATTACAAAGACATGCATGTCGATATAGTTCACAAACGTAAAGCTATTATCCGTTGTCCGAAATGCGATGAGTGTTTTATGTCGTAcgcattaaaaaacaaacatttgaccGAAGCGCATGGACAGAAGCGTACGTACCCTTGCAATTTATGCGATAAAGTTTACAATAGACAGAAAACTTTGACCGAGCATCAAAGACGTAATCATCAGAAAGTTATGAAGCATCAATGTGAATACTGtgatcaaagattttatttgccGTCTAGGTTGAAAGAACATATGGCTACGCATACTGGGGAAAGGAATTTCCGATGTGAGCATTGTGATAAGAGTTATCCACGTCTTAAATCTTTACAGTATCATATACGTACTCATACAAATGATAGGAGATTTAGATGTCATATTTGCGGGCAAGGTTTCATCCAAAATCCTAGTTTGAAAGCGCATATTAAAAGCCATCACCCCGAGTGTGAGGTTGATTTTTTGTATGAtaataattttaggaaattCCAATAA
Protein Sequence: MSVTITKTNGPIINPALCRCCRAIKKCRTLTAEYTWQEEKEVYADMVMDCFGILLSHVDDNLKDCGVCATCVVRLRDASAFRRQVLQCEELFLNAKLQPDKELGVVKVTRQLDIDLKIEPKDDVVEDDLFLNFASAVPIEEPVPPAVFKRSEEKPPPEIDIKDNILDLVNPEPEEKDEPMNFEDADDDRDSDWSASSSDSDKPLKRKKKVEKKTKTSNGKLAKKKAKMLKEKVGKKKPDTKIQKSPKKPPVEKKPNHDRDLDCMSEENLLTIIQYSYVCPFKNRRNNYYCFYCKDYYPKPEDLREHTVSHDTKPFQILMGYKKMPKLDITRIDCRLCSLKIDDLNVFKQHIDNVHGKKIYFQAPDKMLLFRLTWNDLVCVVCNDVFEDFNTLSTHMIDTHFSNFTCDICGMCFLEKPRLDAHLKRHKDDEKHTCEICGKVFKSNHYKDMHVDIVHKRKAIIRCPKCDECFMSYALKNKHLTEAHGQKRTYPCNLCDKVYNRQKTLTEHQRRNHQKVMKHQCEYCDQRFYLPSRLKEHMATHTGERNFRCEHCDKSYPRLKSLQYHIRTHTNDRRFRCHICGQGFIQNPSLKAHIKSHHPECEVDFLYDNNFRKFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00702321;
90% Identity: iTF_00704378;
80% Identity: -