Evul019877.1
Basic Information
- Insect
- Eupithecia vulgata
- Gene Symbol
- -
- Assembly
- GCA_946478135.1
- Location
- CAMLCK010000113.1:1090583-1113482[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.46 35 5.8 0.0 3 23 179 199 177 199 0.95 2 13 0.001 0.075 14.2 1.6 1 23 304 326 304 326 0.99 3 13 3e-05 0.0023 19.0 0.6 1 23 332 355 332 355 0.96 4 13 1.2e-06 8.7e-05 23.4 1.3 2 23 578 599 578 599 0.97 5 13 0.0085 0.64 11.3 3.0 1 23 605 627 605 627 0.97 6 13 0.062 4.7 8.5 6.6 1 23 691 713 691 713 0.97 7 13 0.0017 0.13 13.5 0.7 1 23 749 771 749 771 0.96 8 13 0.00039 0.029 15.5 0.9 1 23 779 801 779 801 0.92 9 13 0.028 2.1 9.6 2.2 1 23 810 832 810 832 0.98 10 13 0.00012 0.009 17.1 0.9 3 23 884 904 883 904 0.98 11 13 0.012 0.92 10.8 5.6 1 23 921 943 921 943 0.97 12 13 2e-06 0.00015 22.7 0.7 1 23 949 971 949 971 0.98 13 13 0.00018 0.014 16.5 5.4 1 23 977 1000 977 1000 0.98
Sequence Information
- Coding Sequence
- ATGGACTTAGATCCTCTTAGCTACAGGCAGTACAACTCATTCCAACCTCCTTTCCAAACCCAACCTACAAACACACTTGCACCTGATATTGCAAATACACAAGCTAATAACGTTAATACACATGCCAATCTCACGAATACATCGGCCAATATCATAAATACACCAGCCAATATATCGAATACACCGGCCAATATATCAAACACACAGCTAAATATCCCTCAAACCCAAACCAATATCACAAACTCACAGGTTTCTCATCTTACACCCATACCATACCCTTACTACCCACAACAGTTACCATACAACCAAATACCCAACCATAATGAACCAAACCAACCCGTCCAAAACCCTGTCAACCAATACCCGATTATGCCTGAAGAAGTGACCAATGAGATCACAGAACCGATACCCGAAGAAGAAGATATTAAGCCAGATATATCAAAGATAAAACTTAAGAAACCTAAACGATTGAAAGGCAAAACAAGCAGTTACTGGAATAAGAAGATTACTGATAAAGATTTTAAGTTCTATGGTTGCGCTGTCTGTAATATTGCATTCCAAGACCTAACAGAGCTCGACTCTCATGTAACAATTCATAGCAACCGAGTTACCAGCTACGATATTAGACTGCAGAATCAGAAAAAGAGGAAACGGCTgaagaaagagaaaaaaaagaaaaagaaagaagcaAAAGTCAAGAATGAGTTTGAATTAGAAATTAAACCCGAAGACGGTTATATTGGCACGGAGAAGGTTGGTGACGTCAAACCTGACATCTGTCAGAATGACAAGAAAGACACAGTCCTTCTTGTTCTTAAGGAGGATAAAAAAGACCTTATAACTGATAAGAATGGAATGGAAAAGGATGTAGCTAAAGGAAAAGCTGGGACCGGTCAGAAAGATGCAGTTTATAAGTGTTTCGCTTGTAACAAACAGTTTGCACTGAGTTATtatctgaaaattcacgtccgaTCTCACACTGATGAAAAACCctacatctgtaattattgtggACAAACTTTCATAACGGCGAGTAAACTCGGGCGCCACAACAAGCGTATACATCTCTCCGTGCGACACCAATGTAGAATATGCTATAAGTTCTATCATAGGTTCGAAGTacttacaaaacattttgaccAAAAGCACGCGGACCAAAAACTAGAAGGCGAGCCATAcgactACAACGCCATCTTACCATACCTAACGGAATTAGATGATCAATTGAAAGTAGAAGAGGATACCAAGAAACCTAAGTCTGAAGATATTTGGGGGGATGCCCCCCAGGAGCCGTTGGGGGCTGAGGTGACAAAGGAGGCAGATCAAGGAGCTGAAAACGAGGTGCCTGCGATCGATCATCTTAAAATAGCGGTGCCTAAGCTTGAAAAGGAAGAAAAGGATGTTAAAAACAAATACGAGATCGAAGAGATAGAAGTAAAATGTGAGTTAGAAGAGACGGAAGATCAGGATGGTCTGTCCGGGTCAGAGTTCATAGACGAAGTGTACGAGCCAGCGAACTCTGATGATGAAGAGGCACCGAAGAGTCTGAAACCTAAACGGGGGGATGAAGCGGTTAAGGTGGAAGGTGAAACGGAGGCGGTTAAGGAGGAGAAGTCCCTCTCAGACGACGAAGAAGAATACTTCCCCCCGGGGGGCTGGGCGCGCTCTCCCCCTCCCGTATCGCCCCCCCGAGCTGCTTCACCACCTCCCAAACGTAAAGGGGGGCCGGGTGTCTGTGAGCTGTGTAACCGGACCTTTAGCAGTCGGAGCTACTTGAAGGTGCATTTGAGGACACATACTGgTGAAAAACCATTTGCGTGCTACATTTGCCACCGCGGCTTCATAACAGCAAACAAAATGCACCGGCACGTGTTAACGCATGATGAGACCTGGGTCGgtgaAAACTGCATAAAACCAGAAACGCCTGATATTAAAGCGGAAACGGAAGAAGACGATAATAGTGAGGAAAAAGATAAAAAacgAAACAAAGTAGAAAAGGCGAAAaacaaaattctaaagaaattaAACCAGAAGATAGATCCGAAATTAAAAGGCAGTCGCAGCTGGCAACACCGGTGTGATTACTGTGATAAGAAaTTCCTACACTTCGAAACGTTGCAAGTTCACAAGAAATCACACGCGGGAGAGGAGCTCATACTGAAATGTAAATACTGCTTGGAACCGCAGCTTGATCAGgtGTCCAAAGAAACGCATGAACAAACCCACGCTGGGCAGAAGAAGCCATATCTATGCACTCTCTGCGGAAGGAACTACAAAAACTCTGCAGCCAtgATATACCACCGGCGGAACCACAAGGCGGACACCGAGAAGCCTTTCATCTGTGATATTTGCTCAAAGAGATTCAACTCGCACGCCAAGCTCGCCCGGCATATACCCACGCATTCCACTGAAAAattCGTATACCGCTACGAGTGTCCGGTCTGCGCCAACATGTTCCACACGCGGTGGCACGTGCAGATGCATCTCAAATCACACCAGAAGGAGGGCCTAATACTAGAAGAGAACCGCAACGCAGTCCTAGCCATGGTCCTCCAGAACGCGCGTAAGATCCCTCTCGGGCCTCCGGCGGAGAACCGAGGAGTCCTGACTGTTCCGCCGATCCCTGCTGGCGATGAGAGATCGAGGATATGTAATATATGTGGACAGGTGTTCCAGCATTTCTACTATTTAGAAGAGCATCTCAAAACGCACGGGAATAAAATAGCTGTCACCgatttagaagaagaagaagagaagaAATACACTTGCCAGGTCTGCTCAAAATCCTTCAAGCTGCACTACTATCTTAAACTGCACAGCTTTACCCACACAAAAGAAAAACCTTTCATCTGTCAACAGTGTGGGAAGGGCTTTATTACAAAAGGGAAACTTAAACGTCACTTAGAAACACATCAAGGGTTAAAAAAGTACCAATGTCATATATGTTGTAAATTCTTTACTAGGCCTAGTTATATGAGAATTCATATAAGAACTATACACGGTACGCAGGATTATAATTTTAGAGATTATGGGATAGGGGTGCCGGTGGGAATTGGGGTGTCGGGCGGTTTAGGGGTACCGCTGGGACAGATTACTGATATTAATATGTAG
- Protein Sequence
- MDLDPLSYRQYNSFQPPFQTQPTNTLAPDIANTQANNVNTHANLTNTSANIINTPANISNTPANISNTQLNIPQTQTNITNSQVSHLTPIPYPYYPQQLPYNQIPNHNEPNQPVQNPVNQYPIMPEEVTNEITEPIPEEEDIKPDISKIKLKKPKRLKGKTSSYWNKKITDKDFKFYGCAVCNIAFQDLTELDSHVTIHSNRVTSYDIRLQNQKKRKRLKKEKKKKKKEAKVKNEFELEIKPEDGYIGTEKVGDVKPDICQNDKKDTVLLVLKEDKKDLITDKNGMEKDVAKGKAGTGQKDAVYKCFACNKQFALSYYLKIHVRSHTDEKPYICNYCGQTFITASKLGRHNKRIHLSVRHQCRICYKFYHRFEVLTKHFDQKHADQKLEGEPYDYNAILPYLTELDDQLKVEEDTKKPKSEDIWGDAPQEPLGAEVTKEADQGAENEVPAIDHLKIAVPKLEKEEKDVKNKYEIEEIEVKCELEETEDQDGLSGSEFIDEVYEPANSDDEEAPKSLKPKRGDEAVKVEGETEAVKEEKSLSDDEEEYFPPGGWARSPPPVSPPRAASPPPKRKGGPGVCELCNRTFSSRSYLKVHLRTHTGEKPFACYICHRGFITANKMHRHVLTHDETWVGENCIKPETPDIKAETEEDDNSEEKDKKRNKVEKAKNKILKKLNQKIDPKLKGSRSWQHRCDYCDKKFLHFETLQVHKKSHAGEELILKCKYCLEPQLDQVSKETHEQTHAGQKKPYLCTLCGRNYKNSAAMIYHRRNHKADTEKPFICDICSKRFNSHAKLARHIPTHSTEKFVYRYECPVCANMFHTRWHVQMHLKSHQKEGLILEENRNAVLAMVLQNARKIPLGPPAENRGVLTVPPIPAGDERSRICNICGQVFQHFYYLEEHLKTHGNKIAVTDLEEEEEKKYTCQVCSKSFKLHYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHLETHQGLKKYQCHICCKFFTRPSYMRIHIRTIHGTQDYNFRDYGIGVPVGIGVSGGLGVPLGQITDINM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00699474;
- 90% Identity
- iTF_00699474;
- 80% Identity
- -