Evul017290.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia vulgata
Gene Symbol
-
Assembly
GCA_946478135.1
Location
CAMLCK010000091.1:4066463-4109094[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.0084 0.63 11.3 0.1 1 23 444 466 444 466 0.97
2 11 8.3e-05 0.0062 17.6 0.7 1 23 476 498 476 498 0.97
3 11 1.1e-06 8e-05 23.5 1.6 1 23 504 526 504 526 0.99
4 11 0.002 0.15 13.2 2.0 1 23 533 555 533 555 0.99
5 11 2.7e-05 0.002 19.1 0.5 1 23 561 583 561 583 0.96
6 11 3.9e-06 0.00029 21.8 0.2 1 23 589 611 589 611 0.97
7 11 2.5e-05 0.0019 19.2 1.9 1 23 617 640 617 640 0.95
8 11 6.7e-06 0.0005 21.0 1.1 1 23 646 669 646 669 0.94
9 11 2.3e-05 0.0017 19.4 2.8 2 23 676 697 675 697 0.97
10 11 3.3e-05 0.0025 18.8 1.1 1 23 703 725 703 725 0.97
11 11 0.018 1.3 10.3 0.0 1 21 731 751 731 755 0.91

Sequence Information

Coding Sequence
ATGATTGACAAGGAATTGAAATCAGAGAACGTACACAGTACGATACTCTGCAAAGAATGCCTTGATCTGTGCATCAACTATGATATGTACAGGGCtaaCATGGCaataataaaaacgaaaatATCAGAGCAGTTCTATGAAACATTAGAAAAACTTACCATTGCGCCTGTCGTCACTCCTAAAAGGGAGATCAAAGGAAAGTTTGTGGTACCAGCGTCCAAGCTCCAACCATTGCCAGCGGATTACCAACTCAATTTAGGAAAAATAGCGGCGCTGGCTTCCAGTACGCAAGCTAAGTCTCAAAAACCCCTACTCAACCTAAAAGTAACCATCGGCAACTCGGTCCTAACTCAGAGCCTGGCGACATCTACCGTGAAAATGATGAAATCTACAGAGCTGTCAAACTCGAAACACATAAACGTCATCGGCGAATGGAACGACAGTCTGCCGACTGAGATCTTCTCGAAtaacgatgataatgatgaagaagTTGATTTGGATATGGAAATTGATGAAGATTGCAAAGCGGTGGTGCCGATCTCCGAAAGTAATCATGTTATCATAGATGCAAACACAATaaagGATGAAAACTCTGAAAGTCCTCAGTACATAAACGCAGAGAACTTTGAACTGCTTTACGAAGGGCAAGAAGACGGTCAACCACatacAATAGTTCTGGACAGCAACAGTTCGTTGCTACAAATGATGTCGGCTGGACAGAAGTTGGTTTACGAGAACGGAGAGATATCACTCGTTATggacgatgataatgatgatgaagggaATGAGGAGGAACAAGATTCGAACGACGAAGAGTCTCAGATAGAGCTGCAGGTGTCCGGAGACGAGGAAACTGCAAATGCCATCATAGCAGCTGCTCAGGAACAAGGTGGCGCCTTTATAAAAGTAGAAAGTGGAGAAATGTACCGAGTGAAATCAGTGCAGAGCCATCCGTCAGACAGCGtgccacagacagacagacaaaccaACTCATCCTCGGTACTCATCAGAAGAGAAAGCGAGAGCTCTACTCACTCTAGCATCGTGGGTCCGCATGCTTCAGGTGACGCCTTCATAAAAGTAGAAAGCGGTGAAATGTACCGATTGAAATCAGTGCAGAGCCATCCGTCAGACAGCGTgtcacagacagacagacaaaccaACTCCGCCTCGGTACTCGTCAGAAGAGAAGGCGAAAGCGCTACTTACACTTGCCTCGTGTGTCCGCATGCCTCAGGTCCTACTTCGAAGTCAAAAGAGATAGGGAATTTCACCGCGAAGGCCCAAGAGATGGTGCATCACATGAAGTTCGCTCACTCCGCCAAAGTTTACATATGTCCTAAGTGCGGCGTCATTATGAGGAATCGCTCGGAATATGCATCGCATTTGGCCCGTCACGGCGCCGTCTCCACCAAGCCGCGGTCCTACGACTGCGTGCTGTGCAACAAGAGGTACAACTCTCGCACGCTGCTGCAGGAACACATGAACGTGCACACCGGCAGCCGGCCCTACCGCTGCCAAGTCTGCGACAAGACCTTCGCCTCCAAGTACACTATGACCGCGCATTTAAAGACGCATCAGGCGAGACCGCGTCCCTTCAAATGCGGGACGTGCCTCAAATCATTCCTCTCGCAGCAGAATCTAAACCAGCACGAGAAGACTCATCTAGGGATCAAGAGCTTTGTCTGTGGGACTTGTGATAAAGCCTTCGCCACACAGCACAGCCTAGAAAGCCACTACGTGGTCCACAGCGGGACAAAGAACCACGTTTGTGACGTGTGCGACAAGGGATTCGCCAGGCGCGCCGAACTTAAAGACCACGTTAGAATACATACAGGCGAGCGTCCGTTCGCCTGCAACATCTGCGACGCGCGTTTCTCCCAGCGGTCGAACCTGCACTCCCACAAGCGAGCCACGCATCTCAACGACAAGCGGCACGCCTGCCCCGACTGCCCCAAGCGGTTCAAACGACGCAGACTCCTCCAGTACCACATAAAGGCGGCGCACACGGGCGAGAGACCGCTCGTCTGCGAGCTCTGTCACACAACGTTCGTGTACCCCGAGCATTACAAGAAACATATGCGGATACACAGCGGGGAACGGCCTTACTACTGTGAGatctGCGGCAAAGCCTTCAATTCTCGCGACAACCGCAACACGCACCGCTTCGTCCACAGCGACAAGAAACCGTACGAGTGCCTCGCGTGCGGCGCCTCCTACATGCGCAAGCGCATGCTCGTCGCGCATATGAACGCTAACGGACATTTAGCGGAGTCAATAGTGGTCAACCAGCCTCGAGTCACGAGGGTCAGTGAAAAAATACATGAATCAAAAGCTGAAAATGAAGATAGTAACGACGAGGataacggtGTCTCGGTGATAACGGACTCCCAAGAGAATGCTATGATTACAGTCTCCACGGACCCCATTGAGCCGCATGTTCAGGTGACAAGCGAAAACGGTAGCATTCTACAGTTCATTCAAGTGAAGATGCCGGATGGGAAAGATGGATGGGTGGCACTCAATGACTGA
Protein Sequence
MIDKELKSENVHSTILCKECLDLCINYDMYRANMAIIKTKISEQFYETLEKLTIAPVVTPKREIKGKFVVPASKLQPLPADYQLNLGKIAALASSTQAKSQKPLLNLKVTIGNSVLTQSLATSTVKMMKSTELSNSKHINVIGEWNDSLPTEIFSNNDDNDEEVDLDMEIDEDCKAVVPISESNHVIIDANTIKDENSESPQYINAENFELLYEGQEDGQPHTIVLDSNSSLLQMMSAGQKLVYENGEISLVMDDDNDDEGNEEEQDSNDEESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMYRVKSVQSHPSDSVPQTDRQTNSSSVLIRRESESSTHSSIVGPHASGDAFIKVESGEMYRLKSVQSHPSDSVSQTDRQTNSASVLVRREGESATYTCLVCPHASGPTSKSKEIGNFTAKAQEMVHHMKFAHSAKVYICPKCGVIMRNRSEYASHLARHGAVSTKPRSYDCVLCNKRYNSRTLLQEHMNVHTGSRPYRCQVCDKTFASKYTMTAHLKTHQARPRPFKCGTCLKSFLSQQNLNQHEKTHLGIKSFVCGTCDKAFATQHSLESHYVVHSGTKNHVCDVCDKGFARRAELKDHVRIHTGERPFACNICDARFSQRSNLHSHKRATHLNDKRHACPDCPKRFKRRRLLQYHIKAAHTGERPLVCELCHTTFVYPEHYKKHMRIHSGERPYYCEICGKAFNSRDNRNTHRFVHSDKKPYECLACGASYMRKRMLVAHMNANGHLAESIVVNQPRVTRVSEKIHESKAENEDSNDEDNGVSVITDSQENAMITVSTDPIEPHVQVTSENGSILQFIQVKMPDGKDGWVALND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00702230;
90% Identity
-
80% Identity
-