Evul002946.1
Basic Information
- Insect
- Eupithecia vulgata
- Gene Symbol
- -
- Assembly
- GCA_946478135.1
- Location
- CAMLCK010000012.1:940104-983165[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.12 8.9 7.7 0.4 1 22 87 108 87 110 0.90 2 30 3.1 2.3e+02 3.2 1.9 1 23 114 136 114 136 0.96 3 30 4.7e-05 0.0035 18.4 4.4 1 23 141 164 141 164 0.98 4 30 0.051 3.8 8.8 0.7 1 23 168 191 168 191 0.96 5 30 0.069 5.2 8.4 0.4 2 21 204 223 204 228 0.93 6 30 0.44 33 5.9 0.0 3 23 238 259 236 259 0.94 7 30 0.076 5.7 8.3 1.8 3 23 280 301 278 301 0.94 8 30 0.0027 0.2 12.8 1.2 3 23 319 339 317 339 0.89 9 30 0.028 2.1 9.6 2.4 1 23 345 367 345 367 0.92 10 30 5.5e-06 0.00041 21.3 0.6 2 22 373 393 373 393 0.95 11 30 0.0091 0.68 11.2 0.7 1 23 531 553 531 553 0.97 12 30 0.0039 0.29 12.3 0.6 2 23 561 583 560 583 0.94 13 30 0.002 0.15 13.2 0.2 1 23 614 637 614 637 0.95 14 30 2.2 1.7e+02 3.7 1.0 1 21 641 661 641 664 0.80 15 30 0.46 34 5.8 0.1 2 23 676 698 675 698 0.94 16 30 0.0034 0.25 12.5 2.9 1 20 704 723 704 728 0.94 17 30 4.3e-05 0.0032 18.5 1.7 3 23 755 776 754 776 0.96 18 30 0.81 61 5.0 0.4 2 22 783 803 782 806 0.89 19 30 0.29 22 6.4 0.2 3 14 872 883 870 886 0.82 20 30 0.29 22 6.4 0.2 3 14 922 933 920 936 0.82 21 30 0.29 22 6.4 0.2 3 14 963 974 961 977 0.82 22 30 0.29 22 6.4 0.2 3 14 1013 1024 1011 1027 0.82 23 30 0.3 22 6.4 0.1 3 14 1054 1065 1052 1068 0.82 24 30 0.3 22 6.4 0.1 3 14 1095 1106 1093 1109 0.82 25 30 0.093 6.9 8.0 0.2 3 14 1136 1147 1134 1148 0.86 26 30 0.29 22 6.4 0.2 3 14 1149 1160 1147 1163 0.82 27 30 0.0024 0.18 13.0 3.1 3 23 1190 1210 1188 1210 0.96 28 30 0.0024 0.18 13.0 1.2 1 23 1216 1238 1216 1238 0.97 29 30 5.4e-05 0.004 18.2 1.6 2 23 1244 1265 1244 1265 0.98 30 30 0.0025 0.19 12.9 0.3 1 23 1271 1294 1271 1294 0.96
Sequence Information
- Coding Sequence
- ATGGCGTCTGGTCGAGttaaaacAAATCTAAAGAAGCAACGGCCTCGAAAGCCCCTAAAGGACCTTGAAGAATATGAAAGCGTATTCGACATTCAACTCTTCAGTACCGATTCTGACATCCGACGCGAGTTTGCCGCTAGAAAAACTTCTGCTAGATATATAGAGGCGCCACATAAATGTGATATCTGCTACACTGTGTACAAGTGTCAAAAGCTAGCTGAATTCCACATGAAGTGGCATCTCCCGTCAGCGGGTGAATTCCCTTGCGATGTTTGTGCTATGCGTTTCAAGTCTCACCCTGCGATGCGCAAACACAAGGCGGATGTGCACTACGGAAGGTTTGCTTGTAAGAAGTGTCCTCTCATCACGTATCACAGAATGGTCATGATTCTACACTACAGAAAACACCAAGGCTTTAGTTATGTCTGTAAAATATGCAACAAGACTTACAAtCACAGTTCGACGTACATGTCACACCTCCGCAAGTCTCACCGCACTGAGCATGTGTGTGTGACTTGCGCGCAGACCTTCGTGTCAGAGAAAGGACTCTCTGTGCATCGGAAGAAGGTCCATAATGCTTCCAGTAAGTTCGACGCTGACGGCACGGCCCGCTGCTCGCAGTGCGACCTGACGTTCGCGAACCAGCAAGTGTACACCGTGCATCTCATGAACACCGACAAACATAAGGACAAGGCTGAGTCGCTTATAGCGTGTCCGGAATGTGGTGTCCAGTTGCCGGACAAGCTGGCCGTGCGCGCGCATCGCCGCGAGATGCACCCCCAGTATAACTACAGCGCGATGAAGCGGGCCGAGAGCGGACAGCCGCTGGGCCAAATATGTCCCTTGTGTGGTGCATCAGGAACCCACAACACCTGGCTGTACCGCCACTTCCGCGAGTGTCATCCCACGCATAACTACGAGCTGTGCGTGGCCAGCGAGCGACGCAAGCATCTTTGTGACCAGTGCGGGAAGAGTTTCTATAATATAACACAGCTGAAGGAGCATGCGTTTGCACACGCGGGGCTCAAGCCGTTCCGATGCGAACAGTGTCCAGCCGCCTTTAGCTCCAAGACTCATCTTAAGTTTCATTCGGAGCGCCactcgccgccgcgccgcgagTGTTCTCACTGCGGTAAAAAGTTTGTTAGTGCAGCCAACCTGTCTAACCATATGAGGaaaaatcTGGACAGTTGTGACATCTCACTTGATACActagaaaatgaaaataatgcaCCGAAATTCCCGGAAGCTAAGCATAAAGAAAATAGAGAAACAATTTGGCCGGAAACCAAGCAATCTGGGAATACTGAAACAGAATGGCCAGAAGATAAGTTTCCCCAACCTGACAGCCCGAAAATCAAAATCGAATGTACAGAAAATACCATTTTAAACATTGAACTTAAATCTGACATAGAACAAGAAGacacAAAAGAAGAAATAGAGCGCTTAAAAAAGTTCCTCCTACATCTTCTAAAAAAGAACAATCCAGAATATGAAGAGATGTTTAACATAGAAAGGCTAGATACAGAAGAGCTTAAACTACAAGAGTTTAGTGGAAGGAAGCTGAGCAAGGAGTATTTAGAGGCGGAGTACAAATGTGAAGTTTGTTACAAAGTATTCGATGCACAGAGACTTTTGGATTATCATAGGAAGTGGCATCAGCCTACGCCCGGTTCCATCACATGCACAATTTGCTTGATGCGGTTCGCTCGCCGCAAGTCGCTCGCTCAACATCTGAAGGACAACCATTGCGCTGTCTACCGCTGCAAGCTGTGTCCACTACTGACTTACAACTTttcCGTGATGGTGAACCACTTCCATCACCACAAAGGCAAGGAGTACCCATGTCCTGTTTGCTTAAGTGTGTTTAGTAATAAAAGTACAATGAACAACCACAGACTGCAAGCGCACAAAACCGCGCATATCTGCCCGCTGTGCGCGCGCAGCTTCGTGTCAGAGAAAGGACTTTACTTTCACAAGCAACTTAAACACAAGGATGAAGTGACGTGCGAGTTATCCACGTGTGTGTGTAACACATGCGGTGCCGCGCTAGGTTCGACACAGCTGCTGGCCGCGCACGTCCGTCTGACGCACAGCGCGCTCACAATTCACAAATGCTTCCATTGCAAGGAAGTGTTCCGTACACTTGAGGAGCTGAGGCAGCACAAAGTGGCCTCAAACCACCAGAGGTCGCCTCGGACAGCGCTGAGGAAAACCATCGACAACACGGTGGTGCCGCTGAACTGCGATGAGAAGCCATACTGCGCAGAGTGCGACAAATCATTCAGCACGCGCAAAAGCTACCTCCGGCATTACAATACCAACCACAACGTCAATAGAATTCAAAAATGCGGATTCTGCCAGGCGAAGTTCACGTCGACAGAAGAGATAGAAGCACACCGAGTCACTTACAACCATCATCCGAAGGTTCGCTATGTGAAGCGGCTGACCAGCACCGCCAAGCCAGCGCGAACTGTCACCAATAACAAGTGCGAGCTGTGTGGGGAAACCGTAGGCATTGGCAGAGTGCGAAGTATGTACCAGcactttgtgacgtcacatcCGGACACGCCTTACTGGTCCGTCTACCGCCGGCCGCAGAGCAGACATCTCTGCGAGCTCTGCGGGAAGACATTCAAGGTAACCAGTGACGTCACATTCATTGTCCACTTCGTGACGTCACATCCGGACACGCCTTACTGGTCCCGGACCAGTAAGGCGTGTCCGGATGTGGTCCGTCTACCGCCGCAGAGCAGACATCTCTGCGAGCTCTGCGGGAAGACATTCAAGGTAACCAGTGACGTCACATTCACTGTCCACTTCGTGACGTCACATCCGGACACGCCTTACTGGTCCGTCTACCGCCGGCCGCAGAGCAGACATCTCTGCGAGCTCTGCGGGAAGACGTTCAAGGTAACCAGTGACGTCACATTCATTGTCCACTTCGTGACGTCACATCCGGACACGCCTTACTGGTCCCGGACCAGTAAGGCGTGTCCAGATGTGGTCCGTCTACCGCCGCAGAGCAGACATCTCTGCGAACTCTGCGGGAAGACATTCAAGGTAACCAGTGACGTCACATTCACTATCCACTTCGTGACGTCACACCCGGACACGCCTTACTGGTCCGTCTACCGCCGGCCGCAGAGCAGACATCTCTGCGAGCTCTGCGGGAAGACATTCAAGGTAACCAGTGACGTCATATTCACTATCCACTTCATGACGTCACATCCGGACACGCCTTACTGGTCCGTCTACCGCCGGCCGCAGAGCAGACATCTCTGCGAGCTCTGCGGGAAGACATTCAAGGTAACCAGTGACGTCATATTCACTATCCACTTCATGACGTCACATCCGGACACGCCTTACTGGTCCGTCTACCGCCGGCCGCAGAGCAGACATCTCTGCGAGCTCTGCGGGAAGACATTCAAGAGCAGACATCTCTGCGAGCTCTGCGGGAAGACATTCAAGGTAACCAGTGACGTCACATTCACTATCCACTTCGTGACGTCACACCCGGACACGCCTTACTGGTCCGTCTACCGCCGGCCGCAGAGCAGACATCTCTGCGAGCTCTGCGGGAAGACATTCAAGGACCTGCGATTCTTCCTCGACCACCGCAACACGCACTCCGGCGCTCGTCCGTACTCCTGCACTATATGCGCGCGCACGTACGCCACCAAACGTCACCTCGGCTGGCATACAGCGCGACACGCGCCGCCACGCAGGCAATGTAAAGACTGCGGCAAGCTGTTCCACAGCGCGGCTAACCTGTTCGCTCATACACGGAGTCATGTGGGCGACCGCCGCTTTAAATGCGATATCTGCAGCAAAGGGTTCCTACACCAGGCGGCGCTTAACGAGCACGTCAGAGGGGTACACAACCACATACGACGCACCAGGAAGTGTAGGGACAAGTGA
- Protein Sequence
- MASGRVKTNLKKQRPRKPLKDLEEYESVFDIQLFSTDSDIRREFAARKTSARYIEAPHKCDICYTVYKCQKLAEFHMKWHLPSAGEFPCDVCAMRFKSHPAMRKHKADVHYGRFACKKCPLITYHRMVMILHYRKHQGFSYVCKICNKTYNHSSTYMSHLRKSHRTEHVCVTCAQTFVSEKGLSVHRKKVHNASSKFDADGTARCSQCDLTFANQQVYTVHLMNTDKHKDKAESLIACPECGVQLPDKLAVRAHRREMHPQYNYSAMKRAESGQPLGQICPLCGASGTHNTWLYRHFRECHPTHNYELCVASERRKHLCDQCGKSFYNITQLKEHAFAHAGLKPFRCEQCPAAFSSKTHLKFHSERHSPPRRECSHCGKKFVSAANLSNHMRKNLDSCDISLDTLENENNAPKFPEAKHKENRETIWPETKQSGNTETEWPEDKFPQPDSPKIKIECTENTILNIELKSDIEQEDTKEEIERLKKFLLHLLKKNNPEYEEMFNIERLDTEELKLQEFSGRKLSKEYLEAEYKCEVCYKVFDAQRLLDYHRKWHQPTPGSITCTICLMRFARRKSLAQHLKDNHCAVYRCKLCPLLTYNFSVMVNHFHHHKGKEYPCPVCLSVFSNKSTMNNHRLQAHKTAHICPLCARSFVSEKGLYFHKQLKHKDEVTCELSTCVCNTCGAALGSTQLLAAHVRLTHSALTIHKCFHCKEVFRTLEELRQHKVASNHQRSPRTALRKTIDNTVVPLNCDEKPYCAECDKSFSTRKSYLRHYNTNHNVNRIQKCGFCQAKFTSTEEIEAHRVTYNHHPKVRYVKRLTSTAKPARTVTNNKCELCGETVGIGRVRSMYQHFVTSHPDTPYWSVYRRPQSRHLCELCGKTFKVTSDVTFIVHFVTSHPDTPYWSRTSKACPDVVRLPPQSRHLCELCGKTFKVTSDVTFTVHFVTSHPDTPYWSVYRRPQSRHLCELCGKTFKVTSDVTFIVHFVTSHPDTPYWSRTSKACPDVVRLPPQSRHLCELCGKTFKVTSDVTFTIHFVTSHPDTPYWSVYRRPQSRHLCELCGKTFKVTSDVIFTIHFMTSHPDTPYWSVYRRPQSRHLCELCGKTFKVTSDVIFTIHFMTSHPDTPYWSVYRRPQSRHLCELCGKTFKSRHLCELCGKTFKVTSDVTFTIHFVTSHPDTPYWSVYRRPQSRHLCELCGKTFKDLRFFLDHRNTHSGARPYSCTICARTYATKRHLGWHTARHAPPRRQCKDCGKLFHSAANLFAHTRSHVGDRRFKCDICSKGFLHQAALNEHVRGVHNHIRRTRKCRDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -