Basic Information

Insect: Eupithecia vulgata
Gene Symbol: -
Assembly: GCA_946478135.1
Location: CAMLCK010000048.1:1165502-1179428[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0018 0.13 13.4 1.2 1 23 214 236 214 236 0.97

2 11 3.2e-05 0.0024 18.9 0.5 2 23 242 263 241 263 0.97

3 11 3e-05 0.0022 19.0 0.1 1 23 269 291 269 291 0.97

4 11 1.6e-05 0.0012 19.8 3.6 1 23 300 322 300 322 0.96

5 11 7.8e-07 5.8e-05 24.0 0.4 1 23 328 350 328 350 0.98

6 11 0.0023 0.17 13.0 8.7 1 23 356 378 356 378 0.96

7 11 1.1e-09 8.5e-08 32.9 0.4 1 23 384 406 384 406 0.99

8 11 1.2e-05 0.00088 20.3 1.2 1 23 412 434 412 434 0.99

9 11 5.4e-05 0.004 18.2 1.1 1 23 440 461 440 461 0.98

10 11 0.023 1.7 9.9 1.9 1 23 467 489 467 489 0.92

11 11 0.0022 0.17 13.1 0.5 1 21 495 515 495 516 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0018	0.13	13.4	1.2	1	23	214	236	214	236	0.97
2	11	3.2e-05	0.0024	18.9	0.5	2	23	242	263	241	263	0.97
3	11	3e-05	0.0022	19.0	0.1	1	23	269	291	269	291	0.97
4	11	1.6e-05	0.0012	19.8	3.6	1	23	300	322	300	322	0.96
5	11	7.8e-07	5.8e-05	24.0	0.4	1	23	328	350	328	350	0.98
6	11	0.0023	0.17	13.0	8.7	1	23	356	378	356	378	0.96
7	11	1.1e-09	8.5e-08	32.9	0.4	1	23	384	406	384	406	0.99
8	11	1.2e-05	0.00088	20.3	1.2	1	23	412	434	412	434	0.99
9	11	5.4e-05	0.004	18.2	1.1	1	23	440	461	440	461	0.98
10	11	0.023	1.7	9.9	1.9	1	23	467	489	467	489	0.92
11	11	0.0022	0.17	13.1	0.5	1	21	495	515	495	516	0.95

Sequence Information

Coding Sequence: ATGGAAACCGAAGATCAACAAAGCCAAGAAGGTGACAACATTCATTTGGAATTAGAGATTCCACTACAATTGCTGCAGTATTTGAATTCTGAAAGTTGCGATCTACAGAACATATGCCGACTTTGTCTTTCCGCCGGTGATGAAGCCCCACTGTTACTACCTACCAGTCAGTTTTGTGTTACGGAGGAGGTATTCCAAGCTATGACATCAGTACAAATAAATGCAAATGATGATCTACCAAGCAGAATATGTTCAAAATGCCAAATGGAACTGGATCACTACTTCAAATTCAGAAGTAAATGTGAAAAATCTGATTATATACTTCGGTCCCTTTTAAAAGAAGGACTCACCATTAAAAATGAACCTATGTGTGAAGCAGTtGGCAGTACTAAAGAGGATGACATTAAAATTATAGAAATTTCACTTCAAACTGAAGAAACAAATAAGCATTCCAAAACCAAGGACTATGAAGGCATCTTAAAAGGTGAAGAAGGCTTAGGAGAGGAAGTCTACAATTGTTATTCAGACTCCAAAAACTACCATAATGACCTGAAGAGTATATTGAGTGAGGATGAAGCATTATGCATCGTCCAGGACACATTAAAGAATGAAAAATCCACTGCTAAATACAGCAACCCATATCCCTGCAAAGAGTGCAAAGAAACATTCCATTCCGAGTTTGATTTGAGCCTCCACACTATTATACACAGCACTGGTCCATGGAAATGCAGCATTTGCAGTAAAGATTTTAATGAGAAACCAGCCCTACGTCGTCACATCCAGCGGCATATGGACAGTAAGCGGTACGCGTGCGACGCGTGCGGGAAAACGTTCGTAGAGTTGTACGCGCTGAAACGACACGCGCGCGTACACACCGGCGAACTGACCGAGAAAAAACATGCTTGCACTGAGTGTGATAAACGGTTCTGTGACAGCAATCAACTTATAGTCCACATGACCCGCCATAACGGAGAGAAGCCATTCCAATGCGTCATCTGCGGTAAATCCTTTTCGTCAGCGCGTCTCTTGCGGTCACACCGGCTCGTCCACTCAGATCTCAAGAAACACGCCTGCGAATACTGCGACAAGCGTTTTCGTCACGAGTCGACACGGAACACGCACCACCGGACTCATACCGGCGAGAAACCCTACGTGTGCTCTATCTGTGGAAAGAGCTTTATACAGGCTTCGAATCTACGCCTGCACATGCGGACTCAtacagGGGAGAAGCCGTATACTTGTTCGCAATGCGACAGCAGATTTTCATCCGGATCGACTCTCAAAGCACACCTGCGCACGCACACCGGGGAGCGACCTTACAAGTGCAAAGTTTGTGGGAAAAGCTTCGCCCGAGTCAACATGAAGCTACATATGCGGCTCCATTCTGGGGAGAGGCCGTTCGCATGTAGCGCTTGTCCTAAGAAATATGTGAGCGCAGCGCATCTCCGCTCGCACTGCCGCGCGCATACTGGTGAAAAACCTTTCGAGTGTGCCAAGTGCCAGTCGAAGTTCGCCACGAAAACTCTACTCATAAAACATTTGAAATCAAAGGAAAAGTTAATCACAATACCTTCAAACTTGCAAGAGCAGCAGGACAAGGCTTCGGCTATTTCTAGTATAAATGAATTCTTAACAATGCCAGTCCAACAAATTGATAATGATATCCCAAATGCTATTGTAGAGTTAACTCTAGGCACGCACGAAACTTTAGATGTTAGCCAGGAATTGGTGTTTCAAGAAAACAATGTAAAGACTCATGTTATAGTGCTTGGCAGCAGTAACACGGTCAGTTTTGTGAGTAACGACGAAAATGGAGAAAGGGGCTTGAATATTGTTACTGTTAATGAAATTGGTGTTAGCATGTCTTCAACTAACTCGAACTCTGGCTGA
Protein Sequence: METEDQQSQEGDNIHLELEIPLQLLQYLNSESCDLQNICRLCLSAGDEAPLLLPTSQFCVTEEVFQAMTSVQINANDDLPSRICSKCQMELDHYFKFRSKCEKSDYILRSLLKEGLTIKNEPMCEAVGSTKEDDIKIIEISLQTEETNKHSKTKDYEGILKGEEGLGEEVYNCYSDSKNYHNDLKSILSEDEALCIVQDTLKNEKSTAKYSNPYPCKECKETFHSEFDLSLHTIIHSTGPWKCSICSKDFNEKPALRRHIQRHMDSKRYACDACGKTFVELYALKRHARVHTGELTEKKHACTECDKRFCDSNQLIVHMTRHNGEKPFQCVICGKSFSSARLLRSHRLVHSDLKKHACEYCDKRFRHESTRNTHHRTHTGEKPYVCSICGKSFIQASNLRLHMRTHTGEKPYTCSQCDSRFSSGSTLKAHLRTHTGERPYKCKVCGKSFARVNMKLHMRLHSGERPFACSACPKKYVSAAHLRSHCRAHTGEKPFECAKCQSKFATKTLLIKHLKSKEKLITIPSNLQEQQDKASAISSINEFLTMPVQQIDNDIPNAIVELTLGTHETLDVSQELVFQENNVKTHVIVLGSSNTVSFVSNDENGERGLNIVTVNEIGVSMSSTNSNSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00697591;
90% Identity: -
80% Identity: -