Basic Information

Insect: Eupithecia vulgata
Gene Symbol: -
Assembly: GCA_946478135.1
Location: CAMLCK010000026.1:447728-456595[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 5.5e-05 0.0041 18.2 2.2 1 23 11 33 11 33 0.97

2 20 0.00019 0.014 16.4 1.0 1 20 39 58 39 61 0.94

3 20 0.00015 0.011 16.8 5.6 1 23 80 102 80 102 0.98

4 20 6.7e-05 0.005 17.9 4.1 1 23 108 130 108 130 0.99

5 20 2.5e-05 0.0019 19.2 5.3 1 23 136 158 136 158 0.97

6 20 3.6e-06 0.00027 21.9 8.4 1 23 164 186 164 186 0.97

7 20 1.6e-06 0.00012 23.0 3.0 1 23 192 214 192 214 0.97

8 20 7e-05 0.0052 17.8 6.7 1 23 220 242 220 242 0.97

9 20 1.3e-05 0.001 20.1 6.4 1 23 248 270 248 270 0.98

10 20 3.3e-07 2.5e-05 25.1 1.9 1 23 276 298 276 298 0.98

11 20 3.4e-05 0.0026 18.8 7.9 1 23 304 326 304 326 0.98

12 20 9e-05 0.0067 17.5 6.8 1 23 332 354 332 354 0.97

13 20 2.8e-06 0.00021 22.2 5.6 1 23 360 382 360 382 0.98

14 20 1.2e-05 0.00089 20.2 6.7 1 23 388 410 388 410 0.97

15 20 4.7e-07 3.5e-05 24.7 5.0 1 23 416 438 416 438 0.98

16 20 1.3e-06 9.9e-05 23.3 3.6 2 23 445 466 444 466 0.98

17 20 1.2e-05 0.0009 20.2 8.1 1 23 472 494 472 494 0.97

18 20 1.2e-06 8.7e-05 23.4 6.5 1 23 500 522 500 522 0.98

19 20 0.00031 0.023 15.8 0.3 1 23 529 551 529 551 0.97

20 20 0.25 19 6.6 5.7 1 23 560 582 560 582 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	5.5e-05	0.0041	18.2	2.2	1	23	11	33	11	33	0.97
2	20	0.00019	0.014	16.4	1.0	1	20	39	58	39	61	0.94
3	20	0.00015	0.011	16.8	5.6	1	23	80	102	80	102	0.98
4	20	6.7e-05	0.005	17.9	4.1	1	23	108	130	108	130	0.99
5	20	2.5e-05	0.0019	19.2	5.3	1	23	136	158	136	158	0.97
6	20	3.6e-06	0.00027	21.9	8.4	1	23	164	186	164	186	0.97
7	20	1.6e-06	0.00012	23.0	3.0	1	23	192	214	192	214	0.97
8	20	7e-05	0.0052	17.8	6.7	1	23	220	242	220	242	0.97
9	20	1.3e-05	0.001	20.1	6.4	1	23	248	270	248	270	0.98
10	20	3.3e-07	2.5e-05	25.1	1.9	1	23	276	298	276	298	0.98
11	20	3.4e-05	0.0026	18.8	7.9	1	23	304	326	304	326	0.98
12	20	9e-05	0.0067	17.5	6.8	1	23	332	354	332	354	0.97
13	20	2.8e-06	0.00021	22.2	5.6	1	23	360	382	360	382	0.98
14	20	1.2e-05	0.00089	20.2	6.7	1	23	388	410	388	410	0.97
15	20	4.7e-07	3.5e-05	24.7	5.0	1	23	416	438	416	438	0.98
16	20	1.3e-06	9.9e-05	23.3	3.6	2	23	445	466	444	466	0.98
17	20	1.2e-05	0.0009	20.2	8.1	1	23	472	494	472	494	0.97
18	20	1.2e-06	8.7e-05	23.4	6.5	1	23	500	522	500	522	0.98
19	20	0.00031	0.023	15.8	0.3	1	23	529	551	529	551	0.97
20	20	0.25	19	6.6	5.7	1	23	560	582	560	582	0.98

Sequence Information

Coding Sequence: ATGTCTGAAGCGGAGAACTCGCCCGGACACCATTCCTGTGACATCTGCGGGAAAATATTCCAATTCCGATATCAGCTTATTGTACACAGACGTTACCACGGCGAGACCAAGCCATTCACATGCCAAGTTTGCGGCACCTCATTCGCGAACCCCGTAGAACTATCCCGGCACGGGAAGTGTCATTTGGCAGGTGACCCGGCTGAAAGACACGCAAAGAGAATGGCCCAAGACAAACCTTATGCATGCTCCACTTGCCATAAAACATTCTTGCGTAAGGAGCATCTAAACAACCACATACGCAGTCACACGGGAGAAACTCCATACAGatgcgAATTCTGCGCAAAAACATTCACCCGGAAAGAGCATATGGTTAACCACGTGCGAAAACATACGGGGGAGACGCCGCATCGCTGTGATATCTGCAAGAAGAGCTTCACGCGGAAGGAGCATTTTATGAACCATGTTATGTGGCACACTGGTGAAACGCCGCACCATTGTACGATTTGTGGGAAGAAATATACTAGAAAGGAACATTTGACGAATCACATGAGATCCCACACGAACGATACTCCGTTCCGCTGTGAGCAGTGCGGAAAATCCTTCACGAGAAAAGAGCATTACTCCAATCACATTTTGTGGCACACTGGCGAAACCCCTCACCGCTGCGACTTCTGTTCAAAAACCTTCACCCGCAAGGAGCATCTCCTAAACCACGTGAGACAACACACGGGAGAGTCGCCGCATCGCTGCAACTACTGCTCCAAGTCGTTCACGCGCCGCGAGCACCTCGTGAACCACGTCCGGCAACACACGGGAGAGACGCCCTTCCAATGCGGATACTGTCCTAAAGCCTTTACTAGGAAAGACCATTTAGTAAATCACGTTCGACAACACACCGGTGAATCTCCCCACAAGTGCTCGTTCTGCACGAAATCCTTCACCCGCAAGGAGCACCTCACGAACCACGTGAGACAACACACGGGCGAGTCGCCCCATCGGTGTACATTCTGCGCCAAGTCTTTCACGAGGAAAGAACATCTTACAAATCACGTCAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTATTGCCCGCGCGCGTTTTCGAGAAAGGAGCATCTGAACTCTCACCTGCGGCAACACACGGGCGTCACTCCGCACTCCTGCTCTTACTGTAGCAAGACCTTCACGAGGAAGGAGCATCTCGTCAACCACGTACGGAAACACACTGGCGAAACACCGTTCAAGTGCACGTACTGTTCGAAGTCATTTTCGCGCAAGGAGCATCTAACGAATCACATAAATCTGCACACGGGGGAGACGCCGAACAAATGCCCATTCTGCACTAAATCCTTCTCAAGGAAGGAACATCTTACGAACCATGTCAGAATACACACGGGCGAGTCGCCGCACCGCTGTGATTTCTGCCAGAAAACGTTCACTCGCAAGGAACATTTGACGAACCATATGAAACAGCACACGGGTGGCGCTGCTCACACGTGTAAGATTTGCCAGAAACCATTCACAAGAAAAGAACATCTGCAGACGCATATGAGGTACCACAGCTGTAGCGAACGACCGTTCAGTTGCGGAGAATGCGGCAAATCCTTCCCACTTAAGGGTAATCTCATGTTCCACGAGCGGTCTCACAACAAATCCGGAGGCCCGAGGCCTTTCCGCTGCGATATATGTTCCAAGGACTTTTTGTGCAAATctCATTTACTAACTCACCGGCGAGTACACGAGGACGCCAGCGACGAAGTATCTGTAGAGACCCAGACTGAGAATGAGGAATGCTTGACCGTCACCACAGATTGCACAAATAAATGCATCAAGGTGGAACTTGACACGGCAgatcaaagAACTTCTGTAGACAATGGACCAACCGAAACTATTACAGTGCAGCCTGCACTCAATTCCCCGAACCACATTGTAGTCACCCAAACTCAAAACACTGTAATGCAGATTAGCAGTCAACAGGTGCGAGTAGGGCAATCAAGTCCAACTGGTGTAGCCACAGGCACTTTCGCCCACACGGTGAGCACACAGCACCATCCAGGTTCCACAATCGCGCACCACCCAGTTACTGTGAACTACTAG
Protein Sequence: MSEAENSPGHHSCDICGKIFQFRYQLIVHRRYHGETKPFTCQVCGTSFANPVELSRHGKCHLAGDPAERHAKRMAQDKPYACSTCHKTFLRKEHLNNHIRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLTNHMRSHTNDTPFRCEQCGKSFTRKEHYSNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNSHLRQHTGVTPHSCSYCSKTFTRKEHLVNHVRKHTGETPFKCTYCSKSFSRKEHLTNHINLHTGETPNKCPFCTKSFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHMKQHTGGAAHTCKICQKPFTRKEHLQTHMRYHSCSERPFSCGECGKSFPLKGNLMFHERSHNKSGGPRPFRCDICSKDFLCKSHLLTHRRVHEDASDEVSVETQTENEECLTVTTDCTNKCIKVELDTADQRTSVDNGPTETITVQPALNSPNHIVVTQTQNTVMQISSQQVRVGQSSPTGVATGTFAHTVSTQHHPGSTIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01429229;
90% Identity: iTF_01429229;
80% Identity: -