Basic Information

Gene Symbol
GI19116
Assembly
GCA_946478135.1
Location
CAMLCK010000215.1:71550-75860[-]

Transcription Factor Domain

TF Family
GTF2I
Domain
GTF2I domain
PFAM
PF02946
TF Group
Other Alpha-Helix Group
Description
This region of sequence similarity is found up to six times in a variety of proteins including GTF2I. It has been suggested that this may be a DNA binding domain [2, 1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.0007 20 6.3 0.0 31 56 346 371 340 376 0.87
2 21 0.0031 90 4.2 0.0 35 56 372 393 370 397 0.87
3 21 0.0013 37 5.4 0.0 32 56 391 415 389 420 0.87
4 21 0.0011 31 5.7 0.0 31 56 412 437 406 441 0.88
5 21 0.0017 48 5.0 0.0 33 56 436 459 434 463 0.87
6 21 0.0014 40 5.3 0.0 32 56 457 481 455 485 0.87
7 21 0.0015 45 5.2 0.0 33 56 480 503 478 508 0.87
8 21 0.0011 31 5.7 0.0 31 56 500 525 494 529 0.88
9 21 0.0011 31 5.7 0.0 31 56 522 547 516 551 0.88
10 21 0.0014 40 5.3 0.0 32 56 545 569 543 573 0.87
11 21 0.0013 37 5.4 0.0 32 56 567 591 565 596 0.87
12 21 0.0013 37 5.4 0.0 32 56 589 613 586 617 0.88
13 21 0.0011 32 5.6 0.0 31 56 610 635 607 640 0.87
14 21 0.0014 40 5.3 0.0 32 56 633 657 631 661 0.87
15 21 0.0011 32 5.6 0.0 31 56 654 679 651 684 0.87
16 21 0.0014 40 5.3 0.0 32 56 677 701 675 705 0.87
17 21 0.0014 40 5.3 0.0 32 56 699 723 697 727 0.87
18 21 0.0014 40 5.3 0.0 33 56 722 745 720 749 0.87
19 21 0.0011 31 5.7 0.0 31 56 742 767 736 771 0.88
20 21 0.0011 33 5.6 0.0 32 56 765 789 763 793 0.87
21 21 0.00098 28 5.8 0.0 31 56 786 811 780 816 0.87

Sequence Information

Coding Sequence
ATGGGGAATGGTCTAAGGCGAGCCGTGACACCAAAAACCATAAACGGTTTGCCTAGTTGGCCGAAAGTCATACCATGGTTTCGCTGTAACAGCATGGATGTGGAGGAGCTGACGTTGCCGCCGGCGGCGACCTGGTGCAGAGCGCTCCGCGGCGAGGGTCGCTGCATGCAGGACGCCGGGGCGGCGACTCCGCCGTCCTCCAGACCTCGGCGTTCCGACGCGGAAGTCACCATGAACAGGAGTTTGCACAGACTTCCGCGCCGCCGAGGCCCACCAGTGCACCACCACCAGTTAAAGTGTTTTGTGCTAGAGAAGAAGTTCTACAACCTGTGGGGCTCGCAGGTGGAGTCAGAGTCTGAGCCGCGCTTGGGCGTGCACCGGCACATCCCGGCGCCGCGGCGTGCGCTGCCCTCGCACGCCGAGAGCTACAACCCTCCGCCCGAGTACTTGCTGGACGCGCGCGAGCGGGCCGAGTGGGACCGGCTCGAGGAGACGCCCTGGAAGCGCAAATACACGTTCGAGCCGCGCGCGCACGCATCGCTGCGCGCCGTGCCCGCCTTCCCGCGCTTCGTGCGCGAGCGCTTCCTGCGCTGCCTGGACCTGTACCTGGCTCCGCGCGCCATCAAGATGCGGCTCACCATCAGCGCCGAGGAGCTGGTGCCGCGCCTGCCTTCCCCGCGTGACCTGCAGCCCTTCCCCACGCAGGAGGCGCTGGCCCTGCGCGGCCACACGGGCCTCGTGCGCAGCGCGGCCTTCGACCCGCAGGGACAGTACATCGTGTCCGGCAGCGACGATGCCACGCTCAAAGTGTGGGAGGTGGGGACGGGTCGTTGCCTGCGCACCGTTCCGCTGTCGGGGCCGGTGACGCGCGTGGCCTGGTCCCCGGTCCGCGGGCTGAGCCTGGTGCTCGCGGCCGTGGGGGCCCGCCTGCTGCTGCTGAACCCGGGCGCAGACATCGGTGCGCACCGCGTCGCCGCCGACACGGACGCGCTGCTGATGGAGGCGCCTCCGCACCACGACCACACCAATCTGACGCAGTACGACGACGAGTGGATCCAGGTTCGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTCGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTCGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCCGACGCAGTACGACGACGAGTGGATCCAGGTTAGTGGGCTAGCCGCAGGAGTGGTGAGTAGAGATCTGACGCAGAAATCTCGACTCCAAGTTTATCTGCTTCAACTTTTTGATTCTTGTCTTGAGCTTTATGAAGTATGGCTTGGCACTTATAAAATGAGATAG
Protein Sequence
MGNGLRRAVTPKTINGLPSWPKVIPWFRCNSMDVEELTLPPAATWCRALRGEGRCMQDAGAATPPSSRPRRSDAEVTMNRSLHRLPRRRGPPVHHHQLKCFVLEKKFYNLWGSQVESESEPRLGVHRHIPAPRRALPSHAESYNPPPEYLLDARERAEWDRLEETPWKRKYTFEPRAHASLRAVPAFPRFVRERFLRCLDLYLAPRAIKMRLTISAEELVPRLPSPRDLQPFPTQEALALRGHTGLVRSAAFDPQGQYIVSGSDDATLKVWEVGTGRCLRTVPLSGPVTRVAWSPVRGLSLVLAAVGARLLLLNPGADIGAHRVAADTDALLMEAPPHHDHTNLTQYDDEWIQVRGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVRGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVRGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDPTQYDDEWIQVSGLAAGVVSRDLTQKSRLQVYLLQLFDSCLELYEVWLGTYKMR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-