Basic Information

Insect: Eupithecia vulgata
Gene Symbol: -
Assembly: GCA_946478135.1
Location: CAMLCK010000113.1:753512-766274[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.5e-10 9.4e-08 32.3 0.0 1 39 298 335 298 339 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.5e-10	9.4e-08	32.3	0.0	1	39	298	335	298	339	0.94

Sequence Information

Coding Sequence: ATGATTAATCTGGTTAAAAAAGATTTGAAGCAATACCCCACCGATAGTGCGTTTGAACAGTTGTTATCTGATGCAAAATTAATTGCTGAAGAATTAGAATGCGAAACAGAATCTAAAGAAACTGCACGTCCACGTCCCCGAAAAAGACATTTTGATTACGAGGCTGCAGATGAGCCCATTTTAGACCCAACCAACAAATttaaaGTAACTCATGAATATATTACTGAGGTTAAACTAAACATGAAACAACACTTGTCTGTGGCTGCTAATTTAGGTTCTCAAGTAACCATCAAAGAAGAACCGCTACCTACCGATATCGATATCAAAGAAGAGGTGACCACAGAAGTAGATACATTGCTGGAGGTTGAGTCTTTTCCAGAAGaatgtataaaaaatcaaataattttaaaagaagATATTAGTGGTCAAGAGAATGATATGGAACAACTTCTTTCCGATACTGGAATTGACCAATCAAAACTTGATGACTCATCTTTTACCATCAAAGATGAATCACTATCTAGAACTCACACAGAAGACTCACATATACAATGTATACAGAAACGCAGCGGTTTAATAGATTATTTTGTGTCAGTTGGATCTACAACGAGAATTGAAGAGATGCTAGAAAACCATCCGatGTTTGTGGATGAAATGGGCAGTAGAAGTTCCCCAAGTGTAATGATGCGACCACAGAGCAGACAGGGGACTGTAGAAAATTCTAGCCCTGATGCTGGAAATACTCCTGAATCTGACGAGCAGCGCTCGCCCCTGCCTAGCCAGTCAGATTGCATGTTTGCAGTTTGCAAATCTTGTGGTTACACAGGGTTTGATTTCAGCCGCTGTGAAAGAAGGAGAAGAAATAACACCGATAGAAAAATTGGTGCTCATACTGAAGATCAAATGCAAAAGGCATTGGATGCTATAAAGGCTGGGAAAAGCATCCGGCAAGCAGCTACAGAGAATGGCATTGCGTTTTCTACTCTGCAAAGATATAATAGAAAAGACAATCCTGATCACTTGACACCAAATTATTCTGTCAGGAAAATATTTACTGTCGATCATGAGGAGACCTTACGAGATTATTACATAAACTGTGCCTTAATGTTTTACGGTCTTACCATCAAAGACTGCCGCCAAATAGCATACGAGATGGCGAAAATGAACAATGTACCAATTCCTGAGAGTTGGGAAGCAAACAAAATGGCTGGCAAAGATTGGCTCAGAGGTTTTCGTGAGCGATTTCCCGATATGACAATATGTAAACCTGAAAACTGCTTGTCACGAGCAACAGCATTTAATAGGGAAACTGTTAATATATTTTTCGACAACCTTCAAAATGTGCTTAGCCGCAGTCCAGCCTTTGTAGATAGCACGCGTATTTATAATTTAGATGAAACGGCTACAAATATTTTGCTAAAAAATCCGCGAGTTGGAGATCCGAAGAGAAAAATGAATATCTGCAAAGAGTCTAGCAGTGAAAAAGGTACGCTTGTTACAACTTGTAACATCATAAGCGCAGTAGGTTTTGCACTCCCTCCCGTATTGGTCTTCCCACGCAAGAATATAAATCCTCGCATGGAAGTTGGAACACCCCCTGGCTCCCTTATCCTCGCATCTCCAACTGGGTGGATGAGCACCGAAAATTTTGTAGAGGTGATGAAGCATTTTGTCCAAAGGTCAGGATCTACAAAGGATTCTCCAACAGTTCTCATCATGGACAATCATGAATCACATCTATCGATTCAAGCATTTAATTTGGCCAAAGAGTCGGGGGTGACTGTGCTGACGTTACCACCACACACATCGGCGAAACTCCAGCCGTTAGACGTCGGTATCCATGGACCGTTCAAATCTTACTGCTCGTCTGCGATGGAGTCATGGATGATGCGAAATCCTGGATGTCCAGTGACCATTTACAATATTGGAGCGCTAATTTGTCAAGCTTTTGAGAAGTGTATGACGCCAGATAACATAAAGCAGTCATTTAGAAAAACCGGTATATACCCGTTCAACAGAAATATATTCTCGGATGATGATTTTATGCCGAGCAGGTCTGATGCTGAATAG
Protein Sequence: MINLVKKDLKQYPTDSAFEQLLSDAKLIAEELECETESKETARPRPRKRHFDYEAADEPILDPTNKFKVTHEYITEVKLNMKQHLSVAANLGSQVTIKEEPLPTDIDIKEEVTTEVDTLLEVESFPEECIKNQIILKEDISGQENDMEQLLSDTGIDQSKLDDSSFTIKDESLSRTHTEDSHIQCIQKRSGLIDYFVSVGSTTRIEEMLENHPMFVDEMGSRSSPSVMMRPQSRQGTVENSSPDAGNTPESDEQRSPLPSQSDCMFAVCKSCGYTGFDFSRCERRRRNNTDRKIGAHTEDQMQKALDAIKAGKSIRQAATENGIAFSTLQRYNRKDNPDHLTPNYSVRKIFTVDHEETLRDYYINCALMFYGLTIKDCRQIAYEMAKMNNVPIPESWEANKMAGKDWLRGFRERFPDMTICKPENCLSRATAFNRETVNIFFDNLQNVLSRSPAFVDSTRIYNLDETATNILLKNPRVGDPKRKMNICKESSSEKGTLVTTCNIISAVGFALPPVLVFPRKNINPRMEVGTPPGSLILASPTGWMSTENFVEVMKHFVQRSGSTKDSPTVLIMDNHESHLSIQAFNLAKESGVTVLTLPPHTSAKLQPLDVGIHGPFKSYCSSAMESWMMRNPGCPVTIYNIGALICQAFEKCMTPDNIKQSFRKTGIYPFNRNIFSDDDFMPSRSDAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -