Evul019027.1
Basic Information
- Insect
- Eupithecia vulgata
- Gene Symbol
- -
- Assembly
- GCA_946478135.1
- Location
- CAMLCK010000106.1:534862-537079[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-12 1.7e-09 37.9 0.0 1 39 16 54 16 58 0.91 2 2 2.5 1.6e+03 -0.4 0.0 18 31 455 468 455 469 0.91
Sequence Information
- Coding Sequence
- ATGGTGCGAAATTAcgtgaaaaaaaaagagacgggaCCCAAATATTCCGAAGACAGATTAAACCGAGCTATTGAAGAAGTACGAGCCGGTAGATTAACAATACATAAGGTGTCAACATTGTACGGAATTCCATTTTCAACACTGTATTGTCGAATTAAAGGTACGCGAGGAGTTATCAAAAAATCTAAAGGGAGGAGAAAAGCACTCACCGAAAATATAGAGAACGTGTTAGCAACTTCCGTAAAACCACTAGCAAAGTGGGGCTTTGGCCTCAGCAGGAAAGAAATTCTGGAATTGGTGGGGGAGGACTggtttcttaattttaaaaagcgGCATAATCTGTCCAATCGAAAACCAGAGCCGTTAGAATATGCTAGAAAGAAAGCTGCCACAGACCCATTTAATATTTACGGATATTTTAATCTTTTGAAAAAGGTTTTGGTTGAACTGGATATAGAAGACAAGCCTGATCGTATCTGGAATTTGGATGAAAGCAGCCTAAGTATCGATCCatccaaatccaaagtcgtcgGAGAAAAAGGCAAAAGCTCATCCCGAGTTACAAGCACTTCGGGTAAAGAAAACACTACTTTTGTTTTGGCTTGTAATGCTATGGGTCAACGAGTGCCTCCTTTAATAATATTCAAAGGAAAAAATATGTGGGATCAATGGAAGGCGCCACTAGACAAAGAATTTCCCGGCACAGCTTACGCGGCGACACCCAATGGTTGGATGGAGACTGaagttttcaaaaattactTCAAAAAAACCCTCGTACCGGCTTTGGGTGATGAAAGACCTGTCTTGGTTATAGACGACGGACACTCCACTCATGTTTCGCTTGACTTGGTAGAATATGCTTTGGAACaagaaataacaattttaaaactCCCTGCCCACACTAGTGATATTTTACAACCATTAGACGTCTCGGTTTTCAAGtcttacaaacaaaaatggGACCAAACTATTGCAACTTGGCAGCGACAACATATTGACCAAAAACTACCCAAATGCCTATTTTCTCAATTTCTGGGAGAAACATGGACCAAAGTCAGCGAAGATGTCATCAAGAATGGTTTTAGGAAGGCAGGCATTTTTCCGTTTGATGTTGATGTTGTCCCAAAAGAGAATTTCGCTAAAGAAGCTTTAGAGCGTTGGGAGAAACACCAACAACAAATCGAAAGGGGTGTGCAAGATAATACTATGGAGCTTGTGAATACCGAGCATATTGATATTGCAAGGTGCGAATCGCCATCGCTTTTATCTTTGTCGATTTCTGAGAATGTCAATGAAGCCTCTAGTTTACAGTCACTGAATGTCGTCAACTCTCCACAAAGATCCGATATTGAAACCCCACGTTCTCAAGAAAAGGCAGTTCATAATTATGAAATCCCACAAACCGCATCTATCTCCATAGATGCGGTCGGTAGTGACATaaacaaagttaaaaaaacaaataaaaggaaacaaAGAGCGAAATTAAACCGAAAGAAAAAGTCAGACGATACAGAGAGTGATGAAAGTTCTGAAGGTAAAGTGTATTATGCAGAATCAGATGCTAGTGAATGGATGGAAGAGGAAGACGAACAACTAGAAGAAGATGAACAATGTGATTCTGATAAAGAAAATAACGAAAGCAGAAAAACACCagtgatgaaaaataaaattggaaGAGTAGGAACAGAAAAAGTAAAGGAAGTAGCAAAGGAACAAGAAAAAGAAGAGATAAGAATTGAAAGGGACGGATCACACGAAACAGCAACCAAAGAGCAAGAAATAGAGCAGATAGAAACTGAGAAGACACGAACGGaggaaaaaacagaaaaaagaaTTCAAGAAAACAATTGGGTTATAGTGAAATATGCACTGAAAAAAGGACTAAAGTACTATGTGGGTGTTATAAAAAAACAGGAAGAACTAGAATAA
- Protein Sequence
- MVRNYVKKKETGPKYSEDRLNRAIEEVRAGRLTIHKVSTLYGIPFSTLYCRIKGTRGVIKKSKGRRKALTENIENVLATSVKPLAKWGFGLSRKEILELVGEDWFLNFKKRHNLSNRKPEPLEYARKKAATDPFNIYGYFNLLKKVLVELDIEDKPDRIWNLDESSLSIDPSKSKVVGEKGKSSSRVTSTSGKENTTFVLACNAMGQRVPPLIIFKGKNMWDQWKAPLDKEFPGTAYAATPNGWMETEVFKNYFKKTLVPALGDERPVLVIDDGHSTHVSLDLVEYALEQEITILKLPAHTSDILQPLDVSVFKSYKQKWDQTIATWQRQHIDQKLPKCLFSQFLGETWTKVSEDVIKNGFRKAGIFPFDVDVVPKENFAKEALERWEKHQQQIERGVQDNTMELVNTEHIDIARCESPSLLSLSISENVNEASSLQSLNVVNSPQRSDIETPRSQEKAVHNYEIPQTASISIDAVGSDINKVKKTNKRKQRAKLNRKKKSDDTESDESSEGKVYYAESDASEWMEEEDEQLEEDEQCDSDKENNESRKTPVMKNKIGRVGTEKVKEVAKEQEKEEIRIERDGSHETATKEQEIEQIETEKTRTEEKTEKRIQENNWVIVKYALKKGLKYYVGVIKKQEELE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00706869;
- 90% Identity
- -
- 80% Identity
- -