Evul023187.1
Basic Information
- Insect
- Eupithecia vulgata
- Gene Symbol
- -
- Assembly
- GCA_946478135.1
- Location
- CAMLCK010000150.1:37603-38319[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-13 4e-10 39.9 0.0 5 43 2 41 1 43 0.92
Sequence Information
- Coding Sequence
- ATGTTGGAAGAAGCCATAAATAAAGTAAGTTCTGGTGCATTAAGTCAAAGAAAAGCTtgcaaaatgtataaaatacctaaaagCACAATTCATctgaaacttaaaaataaacacaaacctGTGGGACGTCCTACATGCTTCACGATGGATGAAGAGATAATTTTCAGAGACCACTTGCTTGCGCTAAGTGACATGGGTATTCCAATAGGTTTACAAGATTTTAGAGATGTAGTGAAAAGATACTTGGATAGCATTGGTAAAACAGTTCCTGTGTTCAAAGACAATAGTCCTGGATATGAGTGGGCAAAACTTTACTTTGAACGACATCTagccataaaagaaaaaattgcTCACAAGATCTCCAGGAAACGAGCTCAAGTAAATGAAGACATGGTGAACGAATTCTTCGACAGGCTTGAAAAAGAGATGGAAGACGTAAGCCCTGACAATATCTATAATTTGGACGAAAGCGGATTCCATGATGATCctggcaaaaaaaaacttttattcagACGTTCCACTAGCCACCCAGAACATGTAAAAAATTCCAGCAAGTCTTGTTTTACCATAGTATTTGCTGGGAATGCTATTGGAGATATGATCCCTCCATTCTTCATATTTAAAGGGAAACATTGTTGGTCCGACTGGCTTTTTAATGCACCAAAGTCTTTAAAGATGGCTGTTTCAAAATCTGGCTGGATAGATGCTGATTGCTGA
- Protein Sequence
- MLEEAINKVSSGALSQRKACKMYKIPKSTIHLKLKNKHKPVGRPTCFTMDEEIIFRDHLLALSDMGIPIGLQDFRDVVKRYLDSIGKTVPVFKDNSPGYEWAKLYFERHLAIKEKIAHKISRKRAQVNEDMVNEFFDRLEKEMEDVSPDNIYNLDESGFHDDPGKKKLLFRRSTSHPEHVKNSSKSCFTIVFAGNAIGDMIPPFFIFKGKHCWSDWLFNAPKSLKMAVSKSGWIDADC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01443755;
- 90% Identity
- -
- 80% Identity
- -